RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
UBR4-202ENST00000375224 TRAPPC8Q9Y2L5 1435 aa11.38□□□□□ -0.59
UBR4-202ENST00000375224 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
UBR4-202ENST00000375224 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
UBR4-202ENST00000375224 FANCAO15360 1455 aa11.37□□□□□ -0.59
UBR4-202ENST00000375224 ARID4BQ4LE39 1312 aaPredicted RBP11.37□□□□□ -0.59
UBR4-202ENST00000375224 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
UBR4-202ENST00000375224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.592e-8■■□□□ 11.8
UBR4-202ENST00000375224 ATP10AO60312 1499 aa11.36□□□□□ -0.59
UBR4-202ENST00000375224 USP47Q96K76 1375 aa11.35□□□□□ -0.59
UBR4-202ENST00000375224 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
UBR4-202ENST00000375224 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
UBR4-202ENST00000375224 KDM5CP41229 1560 aa11.34□□□□□ -0.59
UBR4-202ENST00000375224 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
UBR4-202ENST00000375224 ADGRL1O94910 1474 aa11.33□□□□□ -0.6
UBR4-202ENST00000375224 ATP7AQ04656 1500 aa11.33□□□□□ -0.6
UBR4-202ENST00000375224 KIF7Q2M1P5 1343 aa11.33□□□□□ -0.6
UBR4-202ENST00000375224 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
UBR4-202ENST00000375224 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
UBR4-202ENST00000375224 AFAP1Q8N556 730 aa11.32□□□□□ -0.6
UBR4-202ENST00000375224 CARD11Q9BXL7 1154 aa11.32□□□□□ -0.6
UBR4-202ENST00000375224 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
UBR4-202ENST00000375224 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
UBR4-202ENST00000375224 SCAPERQ9BY12 1400 aa11.32□□□□□ -0.6
UBR4-202ENST00000375224 KANK1Q14678 1352 aa11.32□□□□□ -0.6
UBR4-202ENST00000375224 PLA2R1Q13018 1463 aa11.31□□□□□ -0.6
UBR4-202ENST00000375224 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
UBR4-202ENST00000375224 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
UBR4-202ENST00000375224 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
UBR4-202ENST00000375224 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
UBR4-202ENST00000375224 PRAG1Q86YV5 1406 aa11.29□□□□□ -0.6
UBR4-202ENST00000375224 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
UBR4-202ENST00000375224 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
UBR4-202ENST00000375224 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
UBR4-202ENST00000375224 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
UBR4-202ENST00000375224 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
UBR4-202ENST00000375224 TET3O43151 1660 aa11.28□□□□□ -0.6
UBR4-202ENST00000375224 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
UBR4-202ENST00000375224 LAMC1P11047 1609 aa11.27□□□□□ -0.6
UBR4-202ENST00000375224 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
UBR4-202ENST00000375224 CD109Q6YHK3 1445 aa11.27□□□□□ -0.61
UBR4-202ENST00000375224 A2MP01023 1474 aa11.27□□□□□ -0.61
UBR4-202ENST00000375224 E9PCH4 1651 aa11.27□□□□□ -0.61
UBR4-202ENST00000375224 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
UBR4-202ENST00000375224 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
UBR4-202ENST00000375224 TRPM2O94759 1503 aa11.26□□□□□ -0.61
UBR4-202ENST00000375224 GPRASP1Q5JY77 1395 aa11.26□□□□□ -0.61
UBR4-202ENST00000375224 PTPRTO14522 1441 aa11.25□□□□□ -0.61
UBR4-202ENST00000375224 UBE2Q2Q8WVN8 375 aa11.25□□□□□ -0.61
UBR4-202ENST00000375224 SPHKAPQ2M3C7 1700 aa11.25□□□□□ -0.61
UBR4-202ENST00000375224 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
UBR4-202ENST00000375224 KIF3BO15066 747 aa11.24□□□□□ -0.61
UBR4-202ENST00000375224 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
UBR4-202ENST00000375224 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
UBR4-202ENST00000375224 CEP152O94986 1710 aa11.23□□□□□ -0.61
UBR4-202ENST00000375224 NEO1Q92859 1461 aa11.23□□□□□ -0.61
UBR4-202ENST00000375224 NEURL4Q96JN8 1562 aa11.22□□□□□ -0.61
UBR4-202ENST00000375224 MLH3Q9UHC1 1453 aa11.22□□□□□ -0.61
UBR4-202ENST00000375224 POGZQ7Z3K3 1410 aa11.22□□□□□ -0.61
UBR4-202ENST00000375224 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
UBR4-202ENST00000375224 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
UBR4-202ENST00000375224 LMTK2Q8IWU2 1503 aa11.2□□□□□ -0.62
UBR4-202ENST00000375224 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
UBR4-202ENST00000375224 HECW2Q9P2P5 1572 aa11.2□□□□□ -0.62
UBR4-202ENST00000375224 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
UBR4-202ENST00000375224 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
UBR4-202ENST00000375224 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBR4-202ENST00000375224 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
UBR4-202ENST00000375224 CLTCL1P53675 1640 aa11.19□□□□□ -0.62
UBR4-202ENST00000375224 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
UBR4-202ENST00000375224 NBPF1Q3BBV0 1214 aa11.18□□□□□ -0.62
UBR4-202ENST00000375224 EFCAB6Q5THR3 1501 aa11.18□□□□□ -0.62
UBR4-202ENST00000375224 NEFLP07196 543 aa11.18□□□□□ -0.62
UBR4-202ENST00000375224 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
UBR4-202ENST00000375224 KIF1BO60333 1816 aa11.16□□□□□ -0.62
UBR4-202ENST00000375224 TMF1P82094 1093 aa11.16□□□□□ -0.62
UBR4-202ENST00000375224 RALBP1Q15311 655 aa11.16□□□□□ -0.62
UBR4-202ENST00000375224 GLI2P10070 1586 aa11.16□□□□□ -0.62
UBR4-202ENST00000375224 COL17A1Q9UMD9 1497 aaPredicted RBP11.15□□□□□ -0.62
UBR4-202ENST00000375224 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.62
UBR4-202ENST00000375224 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
UBR4-202ENST00000375224 FAM9BQ8IZU0 186 aa11.14□□□□□ -0.63
UBR4-202ENST00000375224 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
UBR4-202ENST00000375224 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
UBR4-202ENST00000375224 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
UBR4-202ENST00000375224 MYOM2P54296 1465 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 TESK2Q96S53 571 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 FRMPD1Q5SYB0 1578 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 IQGAP1P46940 1657 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
UBR4-202ENST00000375224 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
UBR4-202ENST00000375224 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
UBR4-202ENST00000375224 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
UBR4-202ENST00000375224 MYBBP1AQ9BQG0 1328 aaKnown RBP11.11□□□□□ -0.63
UBR4-202ENST00000375224 CYB5RLQ6IPT4 315 aa11.11□□□□□ -0.63
UBR4-202ENST00000375224 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
UBR4-202ENST00000375224 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
UBR4-202ENST00000375224 CCDC136Q96JN2 1154 aa11.11□□□□□ -0.63
UBR4-202ENST00000375224 RICTORQ6R327 1708 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms