RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 EFCAB2Q5VUJ9 269 aa23.05■■□□□ 1.28
RXRB-201ENST00000374680 KDM5CP41229 1560 aa23.04■■□□□ 1.28
RXRB-201ENST00000374680 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
RXRB-201ENST00000374680 ANP32EQ9BTT0 268 aa23.03■■□□□ 1.28
RXRB-201ENST00000374680 CDC42BPBQ9Y5S2 1711 aa23.03■■□□□ 1.28
RXRB-201ENST00000374680 CHD1O14646 1710 aa23.02■■□□□ 1.28
RXRB-201ENST00000374680 TTC37Q6PGP7 1564 aa23.02■■□□□ 1.28
RXRB-201ENST00000374680 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
RXRB-201ENST00000374680 NUDCQ9Y266 331 aa23.02■■□□□ 1.27
RXRB-201ENST00000374680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23■■□□□ 1.27
RXRB-201ENST00000374680 PANK3Q9H999 370 aa23■■□□□ 1.27
RXRB-201ENST00000374680 PLA2R1Q13018 1463 aa22.99■■□□□ 1.27
RXRB-201ENST00000374680 ARHGEF12Q9NZN5 1544 aa22.97■■□□□ 1.27
RXRB-201ENST00000374680 MSH5O43196 834 aa22.97■■□□□ 1.27
RXRB-201ENST00000374680 ARID4BQ4LE39 1312 aaPredicted RBP22.96■■□□□ 1.27
RXRB-201ENST00000374680 MYBBP1AQ9BQG0 1328 aaKnown RBP22.96■■□□□ 1.27
RXRB-201ENST00000374680 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
RXRB-201ENST00000374680 CCDC136Q96JN2 1154 aa22.95■■□□□ 1.27
RXRB-201ENST00000374680 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
RXRB-201ENST00000374680 PRAG1Q86YV5 1406 aa22.94■■□□□ 1.26
RXRB-201ENST00000374680 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
RXRB-201ENST00000374680 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
RXRB-201ENST00000374680 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
RXRB-201ENST00000374680 RALBP1Q15311 655 aa22.93■■□□□ 1.26
RXRB-201ENST00000374680 CDCA7LQ96GN5 454 aa22.92■■□□□ 1.26
RXRB-201ENST00000374680 TESK2Q96S53 571 aa22.92■■□□□ 1.26
RXRB-201ENST00000374680 PREX2Q70Z35 1606 aa22.91■■□□□ 1.26
RXRB-201ENST00000374680 KIF3BO15066 747 aa22.91■■□□□ 1.26
RXRB-201ENST00000374680 A2MP01023 1474 aa22.91■■□□□ 1.26
RXRB-201ENST00000374680 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
RXRB-201ENST00000374680 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.26
RXRB-201ENST00000374680 NLRP13Q86W25 1043 aa22.88■■□□□ 1.25
RXRB-201ENST00000374680 TMF1P82094 1093 aa22.88■■□□□ 1.25
RXRB-201ENST00000374680 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
RXRB-201ENST00000374680 SMG6Q86US8 1419 aaKnown RBP22.87■■□□□ 1.25
RXRB-201ENST00000374680 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
RXRB-201ENST00000374680 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
RXRB-201ENST00000374680 ABCC2Q92887 1545 aa22.86■■□□□ 1.25
RXRB-201ENST00000374680 POLR1AO95602 1720 aaPredicted RBP22.86■■□□□ 1.25
RXRB-201ENST00000374680 PLCH2O75038 1416 aa22.85■■□□□ 1.25
RXRB-201ENST00000374680 PLIN1O60240 522 aa22.84■■□□□ 1.25
RXRB-201ENST00000374680 ERICH6Q7L0X2 663 aa22.84■■□□□ 1.25
RXRB-201ENST00000374680 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.25
RXRB-201ENST00000374680 EXOC6Q8TAG9 804 aa22.81■■□□□ 1.24
RXRB-201ENST00000374680 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
RXRB-201ENST00000374680 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
RXRB-201ENST00000374680 SCAPERQ9BY12 1400 aa22.78■■□□□ 1.24
RXRB-201ENST00000374680 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
RXRB-201ENST00000374680 CFAP70Q5T0N1 1121 aa22.77■■□□□ 1.24
RXRB-201ENST00000374680 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
RXRB-201ENST00000374680 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
RXRB-201ENST00000374680 ADAMTS8Q9UP79 889 aa22.75■■□□□ 1.23
RXRB-201ENST00000374680 DUOX2Q9NRD8 1548 aa22.74■■□□□ 1.23
RXRB-201ENST00000374680 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
RXRB-201ENST00000374680 RRP1P56182 461 aaKnown RBP22.73■■□□□ 1.23
RXRB-201ENST00000374680 NUTM2DQ5VT03 806 aaPredicted RBP22.73■■□□□ 1.23
RXRB-201ENST00000374680 GGT6Q6P531 493 aa22.73■■□□□ 1.23
RXRB-201ENST00000374680 TRPM1Q7Z4N2 1603 aa22.73■■□□□ 1.23
RXRB-201ENST00000374680 SKAP1Q86WV1 359 aa22.72■■□□□ 1.23
RXRB-201ENST00000374680 ZCCHC11Q5TAX3 1644 aaKnown RBP22.72■■□□□ 1.23
RXRB-201ENST00000374680 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
RXRB-201ENST00000374680 GPRASP1Q5JY77 1395 aa22.7■■□□□ 1.23
RXRB-201ENST00000374680 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
RXRB-201ENST00000374680 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
RXRB-201ENST00000374680 UNC13BO14795 1591 aa22.68■■□□□ 1.22
RXRB-201ENST00000374680 FANCIQ9NVI1 1328 aa22.68■■□□□ 1.22
RXRB-201ENST00000374680 COL17A1Q9UMD9 1497 aaPredicted RBP22.68■■□□□ 1.22
RXRB-201ENST00000374680 ADGRF5Q8IZF2 1346 aa22.67■■□□□ 1.22
RXRB-201ENST00000374680 TNNT2P45379 298 aaPredicted RBP22.67■■□□□ 1.22
RXRB-201ENST00000374680 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
RXRB-201ENST00000374680 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
RXRB-201ENST00000374680 PPP2R1AP30153 589 aa22.66■■□□□ 1.22
RXRB-201ENST00000374680 MAST1Q9Y2H9 1570 aa22.65■■□□□ 1.22
RXRB-201ENST00000374680 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
RXRB-201ENST00000374680 KANK1Q14678 1352 aa22.64■■□□□ 1.21
RXRB-201ENST00000374680 FANCAO15360 1455 aa22.63■■□□□ 1.21
RXRB-201ENST00000374680 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
RXRB-201ENST00000374680 ABCC1P33527 1531 aa22.63■■□□□ 1.21
RXRB-201ENST00000374680 TRAK1Q9UPV9 953 aa22.62■■□□□ 1.21
RXRB-201ENST00000374680 PLXNC1O60486 1568 aa22.61■■□□□ 1.21
RXRB-201ENST00000374680 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
RXRB-201ENST00000374680 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
RXRB-201ENST00000374680 ATP10AO60312 1499 aa22.61■■□□□ 1.21
RXRB-201ENST00000374680 C20orf194Q5TEA3 1177 aa22.61■■□□□ 1.21
RXRB-201ENST00000374680 AMER1Q5JTC6 1135 aaPredicted RBP22.6■■□□□ 1.21
RXRB-201ENST00000374680 UGGT1Q9NYU2 1555 aa22.6■■□□□ 1.21
RXRB-201ENST00000374680 PRDM15P57071 1507 aaPredicted RBP22.6■■□□□ 1.21
RXRB-201ENST00000374680 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.21
RXRB-201ENST00000374680 CRBNQ96SW2 442 aa22.58■■□□□ 1.21
RXRB-201ENST00000374680 ADGRL1O94910 1474 aa22.57■■□□□ 1.2
RXRB-201ENST00000374680 NBR1Q14596 966 aa22.57■■□□□ 1.2
RXRB-201ENST00000374680 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
RXRB-201ENST00000374680 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
RXRB-201ENST00000374680 CFAP65Q6ZU64 1925 aaKnown RBP22.55■■□□□ 1.2
RXRB-201ENST00000374680 PDE3BQ13370 1112 aa22.55■■□□□ 1.2
RXRB-201ENST00000374680 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
RXRB-201ENST00000374680 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
RXRB-201ENST00000374680 RAPGEF3O95398 923 aa22.54■■□□□ 1.2
RXRB-201ENST00000374680 CDCA8Q53HL2 280 aa22.54■■□□□ 1.2
RXRB-201ENST00000374680 E9PCH4 1651 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms