RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 KDM4FA0A1W2PPD8 638 aa22.68■■□□□ 1.22
HSPG2-201ENST00000374673 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
HSPG2-201ENST00000374673 NAIPQ13075 1403 aa22.67■■□□□ 1.22
HSPG2-201ENST00000374673 RIMS1Q86UR5 1692 aaKnown RBP22.67■■□□□ 1.22
HSPG2-201ENST00000374673 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
HSPG2-201ENST00000374673 GGT6Q6P531 493 aa22.65■■□□□ 1.22
HSPG2-201ENST00000374673 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
HSPG2-201ENST00000374673 ZC3H13Q5T200 1668 aaKnown RBP22.64■■□□□ 1.21
HSPG2-201ENST00000374673 UNC13BO14795 1591 aa22.63■■□□□ 1.21
HSPG2-201ENST00000374673 MROH2AA6NES4 1674 aa22.63■■□□□ 1.21
HSPG2-201ENST00000374673 CLTCQ00610 1675 aaKnown RBP22.63■■□□□ 1.21
HSPG2-201ENST00000374673 CNTLNQ9NXG0 1405 aa22.62■■□□□ 1.21
HSPG2-201ENST00000374673 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
HSPG2-201ENST00000374673 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
HSPG2-201ENST00000374673 CEP152O94986 1710 aa22.59■■□□□ 1.21
HSPG2-201ENST00000374673 PTPRMP28827 1452 aa22.58■■□□□ 1.2
HSPG2-201ENST00000374673 ABCC3O15438 1527 aa22.57■■□□□ 1.2
HSPG2-201ENST00000374673 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
HSPG2-201ENST00000374673 C3P01024 1663 aa22.56■■□□□ 1.2
HSPG2-201ENST00000374673 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
HSPG2-201ENST00000374673 KANK1Q14678 1352 aa22.54■■□□□ 1.2
HSPG2-201ENST00000374673 LMTK2Q8IWU2 1503 aa22.54■■□□□ 1.2
HSPG2-201ENST00000374673 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
HSPG2-201ENST00000374673 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
HSPG2-201ENST00000374673 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
HSPG2-201ENST00000374673 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
HSPG2-201ENST00000374673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.2
HSPG2-201ENST00000374673 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
HSPG2-201ENST00000374673 TET3O43151 1660 aa22.49■■□□□ 1.19
HSPG2-201ENST00000374673 NUP155O75694 1391 aa22.47■■□□□ 1.19
HSPG2-201ENST00000374673 PZPP20742 1482 aa22.47■■□□□ 1.19
HSPG2-201ENST00000374673 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
HSPG2-201ENST00000374673 RAB3GAP2Q9H2M9 1393 aa22.46■■□□□ 1.19
HSPG2-201ENST00000374673 ARHGAP31Q2M1Z3 1444 aa22.46■■□□□ 1.19
HSPG2-201ENST00000374673 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
HSPG2-201ENST00000374673 CEBPAP49715 358 aaPredicted RBP22.43■■□□□ 1.18
HSPG2-201ENST00000374673 NPATQ14207 1427 aa22.42■■□□□ 1.18
HSPG2-201ENST00000374673 E9PCH4 1651 aa22.41■■□□□ 1.18
HSPG2-201ENST00000374673 PREX1Q8TCU6 1659 aa22.4■■□□□ 1.18
HSPG2-201ENST00000374673 SETD1BQ9UPS6 1966 aaKnown RBP22.4■■□□□ 1.18
HSPG2-201ENST00000374673 HRCP23327 699 aa22.4■■□□□ 1.18
HSPG2-201ENST00000374673 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
HSPG2-201ENST00000374673 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.18
HSPG2-201ENST00000374673 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
HSPG2-201ENST00000374673 TRIM52Q96A61 297 aa22.39■■□□□ 1.17
HSPG2-201ENST00000374673 CFAP65Q6ZU64 1925 aaKnown RBP22.38■■□□□ 1.17
HSPG2-201ENST00000374673 ERVK-7P63135 1459 aa22.37■■□□□ 1.17
HSPG2-201ENST00000374673 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
HSPG2-201ENST00000374673 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
HSPG2-201ENST00000374673 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.17
HSPG2-201ENST00000374673 NOS1P29475 1434 aa22.31■■□□□ 1.16
HSPG2-201ENST00000374673 TNRQ92752 1358 aa22.31■■□□□ 1.16
HSPG2-201ENST00000374673 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
HSPG2-201ENST00000374673 SLC4A1APQ9BWU0 796 aaKnown RBP22.3■■□□□ 1.16
HSPG2-201ENST00000374673 SPHKAPQ2M3C7 1700 aa22.3■■□□□ 1.16
HSPG2-201ENST00000374673 SYNMO15061 1565 aa22.29■■□□□ 1.16
HSPG2-201ENST00000374673 MPHOSPH9Q99550 1183 aa22.28■■□□□ 1.16
HSPG2-201ENST00000374673 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
HSPG2-201ENST00000374673 NLRP1Q9C000 1473 aa22.27■■□□□ 1.16
HSPG2-201ENST00000374673 PKD2Q13563 968 aa22.26■■□□□ 1.15
HSPG2-201ENST00000374673 CEP170BQ9Y4F5 1589 aaPredicted RBP22.25■■□□□ 1.15
HSPG2-201ENST00000374673 LMTK3Q96Q04 1460 aa22.25■■□□□ 1.15
HSPG2-201ENST00000374673 PIK3C2BO00750 1634 aa22.24■■□□□ 1.15
HSPG2-201ENST00000374673 PTPRTO14522 1441 aa22.24■■□□□ 1.15
HSPG2-201ENST00000374673 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
HSPG2-201ENST00000374673 A2ML1A8K2U0 1454 aa22.23■■□□□ 1.15
HSPG2-201ENST00000374673 TRPM2O94759 1503 aa22.22■■□□□ 1.15
HSPG2-201ENST00000374673 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.15
HSPG2-201ENST00000374673 UBR1Q8IWV7 1749 aa22.19■■□□□ 1.14
HSPG2-201ENST00000374673 UGGT1Q9NYU2 1555 aa22.18■■□□□ 1.14
HSPG2-201ENST00000374673 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
HSPG2-201ENST00000374673 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
HSPG2-201ENST00000374673 CLTCL1P53675 1640 aa22.17■■□□□ 1.14
HSPG2-201ENST00000374673 IDI1Q13907 227 aa22.15■■□□□ 1.14
HSPG2-201ENST00000374673 FOXD1Q16676 465 aa22.15■■□□□ 1.14
HSPG2-201ENST00000374673 ADGRB3O60242 1522 aa22.15■■□□□ 1.14
HSPG2-201ENST00000374673 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
HSPG2-201ENST00000374673 KIF1BO60333 1816 aa22.12■■□□□ 1.13
HSPG2-201ENST00000374673 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
HSPG2-201ENST00000374673 DHX57Q6P158 1386 aaKnown RBP22.1■■□□□ 1.13
HSPG2-201ENST00000374673 ANKRD30BQ9BXX2 1392 aa22.09■■□□□ 1.13
HSPG2-201ENST00000374673 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.13
HSPG2-201ENST00000374673 HSPA2P54652 639 aa22.08■■□□□ 1.13
HSPG2-201ENST00000374673 THEMISQ8N1K5 641 aaPredicted RBP22.07■■□□□ 1.12
HSPG2-201ENST00000374673 SLIT1O75093 1534 aa22.06■■□□□ 1.12
HSPG2-201ENST00000374673 STAG3Q9UJ98 1225 aa22.06■■□□□ 1.12
HSPG2-201ENST00000374673 ARHGAP23Q9P227 1491 aa22.05■■□□□ 1.12
HSPG2-201ENST00000374673 POLR1AO95602 1720 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-201ENST00000374673 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
HSPG2-201ENST00000374673 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
HSPG2-201ENST00000374673 TMEM2Q9UHN6 1383 aa22.01■■□□□ 1.11
HSPG2-201ENST00000374673 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
HSPG2-201ENST00000374673 ZFYVE9O95405 1425 aa21.98■■□□□ 1.11
HSPG2-201ENST00000374673 SPATA31E1Q6ZUB1 1445 aa21.97■■□□□ 1.11
HSPG2-201ENST00000374673 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
HSPG2-201ENST00000374673 RIMS2Q9UQ26 1411 aa21.96■■□□□ 1.11
HSPG2-201ENST00000374673 ANKLE2Q86XL3 938 aa21.95■■□□□ 1.1
HSPG2-201ENST00000374673 NEXMIFQ5QGS0 1516 aa21.95■■□□□ 1.1
HSPG2-201ENST00000374673 PPLO60437 1756 aa21.94■■□□□ 1.1
HSPG2-201ENST00000374673 MED14O60244 1454 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms