RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
CLIC4-201ENST00000374379 RGS3P49796 1198 aa17.8■□□□□ 0.44
CLIC4-201ENST00000374379 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
CLIC4-201ENST00000374379 ZBED9Q6R2W3 1325 aa17.8■□□□□ 0.44
CLIC4-201ENST00000374379 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
CLIC4-201ENST00000374379 PLIN1O60240 522 aa17.8■□□□□ 0.44
CLIC4-201ENST00000374379 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
CLIC4-201ENST00000374379 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
CLIC4-201ENST00000374379 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
CLIC4-201ENST00000374379 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.43
CLIC4-201ENST00000374379 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
CLIC4-201ENST00000374379 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
CLIC4-201ENST00000374379 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
CLIC4-201ENST00000374379 GPATCH8Q9UKJ3 1502 aaKnown RBP17.75■□□□□ 0.43
CLIC4-201ENST00000374379 SOX12O15370 315 aa17.75■□□□□ 0.43
CLIC4-201ENST00000374379 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
CLIC4-201ENST00000374379 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
CLIC4-201ENST00000374379 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
CLIC4-201ENST00000374379 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
CLIC4-201ENST00000374379 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
CLIC4-201ENST00000374379 MAGI3Q5TCQ9 1506 aa17.72■□□□□ 0.43
CLIC4-201ENST00000374379 SCAPERQ9BY12 1400 aa17.71■□□□□ 0.43
CLIC4-201ENST00000374379 ATP10BO94823 1461 aa17.7■□□□□ 0.42
CLIC4-201ENST00000374379 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
CLIC4-201ENST00000374379 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLIC4-201ENST00000374379 EXOC6Q8TAG9 804 aa17.69■□□□□ 0.42
CLIC4-201ENST00000374379 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
CLIC4-201ENST00000374379 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
CLIC4-201ENST00000374379 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
CLIC4-201ENST00000374379 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
CLIC4-201ENST00000374379 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
CLIC4-201ENST00000374379 WDR62O43379 1518 aa17.67■□□□□ 0.42
CLIC4-201ENST00000374379 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
CLIC4-201ENST00000374379 MAPK8IP3Q9UPT6 1336 aa17.67■□□□□ 0.42
CLIC4-201ENST00000374379 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
CLIC4-201ENST00000374379 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
CLIC4-201ENST00000374379 APAF1O14727 1248 aa17.65■□□□□ 0.42
CLIC4-201ENST00000374379 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
CLIC4-201ENST00000374379 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.42
CLIC4-201ENST00000374379 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
CLIC4-201ENST00000374379 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
CLIC4-201ENST00000374379 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
CLIC4-201ENST00000374379 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
CLIC4-201ENST00000374379 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
CLIC4-201ENST00000374379 FTSJ3Q8IY81 847 aaKnown RBP17.63■□□□□ 0.41
CLIC4-201ENST00000374379 ADAMTS8Q9UP79 889 aa17.63■□□□□ 0.41
CLIC4-201ENST00000374379 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
CLIC4-201ENST00000374379 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
CLIC4-201ENST00000374379 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
CLIC4-201ENST00000374379 MINK1Q8N4C8 1332 aaPredicted RBP17.62■□□□□ 0.41
CLIC4-201ENST00000374379 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
CLIC4-201ENST00000374379 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
CLIC4-201ENST00000374379 KIF14Q15058 1648 aa17.61■□□□□ 0.41
CLIC4-201ENST00000374379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLIC4-201ENST00000374379 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
CLIC4-201ENST00000374379 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
CLIC4-201ENST00000374379 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
CLIC4-201ENST00000374379 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
CLIC4-201ENST00000374379 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.41
CLIC4-201ENST00000374379 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
CLIC4-201ENST00000374379 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.4
CLIC4-201ENST00000374379 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
CLIC4-201ENST00000374379 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
CLIC4-201ENST00000374379 ARXQ96QS3 562 aa17.56■□□□□ 0.4
CLIC4-201ENST00000374379 CENPJQ9HC77 1338 aaPredicted RBP17.55■□□□□ 0.4
CLIC4-201ENST00000374379 SLC12A5Q9H2X9 1139 aa17.55■□□□□ 0.4
CLIC4-201ENST00000374379 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
CLIC4-201ENST00000374379 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
CLIC4-201ENST00000374379 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
CLIC4-201ENST00000374379 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
CLIC4-201ENST00000374379 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
CLIC4-201ENST00000374379 KDM6BO15054 1643 aa17.51■□□□□ 0.39
CLIC4-201ENST00000374379 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
CLIC4-201ENST00000374379 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
CLIC4-201ENST00000374379 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
CLIC4-201ENST00000374379 ERBINQ96RT1 1412 aa17.49■□□□□ 0.39
CLIC4-201ENST00000374379 PZPP20742 1482 aa17.48■□□□□ 0.39
CLIC4-201ENST00000374379 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 NUP160Q12769 1436 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
CLIC4-201ENST00000374379 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.38
CLIC4-201ENST00000374379 COG6Q9Y2V7 657 aa17.46■□□□□ 0.38
CLIC4-201ENST00000374379 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
CLIC4-201ENST00000374379 MTHFSP49914 203 aa17.45■□□□□ 0.38
CLIC4-201ENST00000374379 DISP3Q9P2K9 1392 aa17.44■□□□□ 0.38
CLIC4-201ENST00000374379 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
CLIC4-201ENST00000374379 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
CLIC4-201ENST00000374379 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
CLIC4-201ENST00000374379 SKAP1Q86WV1 359 aa17.42■□□□□ 0.38
CLIC4-201ENST00000374379 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
CLIC4-201ENST00000374379 MYH16Q9H6N6 1097 aa17.41■□□□□ 0.38
CLIC4-201ENST00000374379 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
CLIC4-201ENST00000374379 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
CLIC4-201ENST00000374379 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
CLIC4-201ENST00000374379 PDE4AP27815 886 aa17.4■□□□□ 0.38
CLIC4-201ENST00000374379 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
CLIC4-201ENST00000374379 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms