RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
PHACTR4-202ENST00000373839 EVC2Q86UK5 1308 aa13.86□□□□□ -0.19
PHACTR4-202ENST00000373839 CENPJQ9HC77 1338 aaPredicted RBP13.85□□□□□ -0.19
PHACTR4-202ENST00000373839 COG3Q96JB2 828 aa13.85□□□□□ -0.19
PHACTR4-202ENST00000373839 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
PHACTR4-202ENST00000373839 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
PHACTR4-202ENST00000373839 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
PHACTR4-202ENST00000373839 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
PHACTR4-202ENST00000373839 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
PHACTR4-202ENST00000373839 CGNL1Q0VF96 1302 aa13.84□□□□□ -0.19
PHACTR4-202ENST00000373839 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.19
PHACTR4-202ENST00000373839 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.19
PHACTR4-202ENST00000373839 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
PHACTR4-202ENST00000373839 FRAT2O75474 233 aaPredicted RBP13.83□□□□□ -0.2
PHACTR4-202ENST00000373839 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
PHACTR4-202ENST00000373839 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
PHACTR4-202ENST00000373839 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
PHACTR4-202ENST00000373839 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
PHACTR4-202ENST00000373839 SLC4A10Q6U841 1118 aa13.81□□□□□ -0.2
PHACTR4-202ENST00000373839 EVA1CP58658 441 aa13.8□□□□□ -0.2
PHACTR4-202ENST00000373839 TEFQ10587 303 aa13.8□□□□□ -0.2
PHACTR4-202ENST00000373839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
PHACTR4-202ENST00000373839 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
PHACTR4-202ENST00000373839 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
PHACTR4-202ENST00000373839 NEXNQ0ZGT2 675 aa13.79□□□□□ -0.2
PHACTR4-202ENST00000373839 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
PHACTR4-202ENST00000373839 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
PHACTR4-202ENST00000373839 ST18O60284 1047 aa13.77□□□□□ -0.21
PHACTR4-202ENST00000373839 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
PHACTR4-202ENST00000373839 KIF16BQ96L93 1317 aa13.77□□□□□ -0.21
PHACTR4-202ENST00000373839 NUTM2DQ5VT03 806 aaPredicted RBP13.76□□□□□ -0.21
PHACTR4-202ENST00000373839 AMOTL1Q8IY63 956 aa13.76□□□□□ -0.21
PHACTR4-202ENST00000373839 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
PHACTR4-202ENST00000373839 NOL10Q9BSC4 688 aaKnown RBP13.75□□□□□ -0.21
PHACTR4-202ENST00000373839 MARCH6O60337 910 aa13.75□□□□□ -0.21
PHACTR4-202ENST00000373839 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
PHACTR4-202ENST00000373839 E9PSI1 815 aa13.74□□□□□ -0.21
PHACTR4-202ENST00000373839 PHF14O94880 888 aa13.73□□□□□ -0.21
PHACTR4-202ENST00000373839 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
PHACTR4-202ENST00000373839 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-202ENST00000373839 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-202ENST00000373839 NUTM2FA1L443 756 aa13.72□□□□□ -0.21
PHACTR4-202ENST00000373839 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-202ENST00000373839 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-202ENST00000373839 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
PHACTR4-202ENST00000373839 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
PHACTR4-202ENST00000373839 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 ZKSCAN2Q63HK3 967 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 PANK3Q9H999 370 aa13.71□□□□□ -0.21
PHACTR4-202ENST00000373839 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.22
PHACTR4-202ENST00000373839 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.22
PHACTR4-202ENST00000373839 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 PSME1Q06323 249 aa13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-202ENST00000373839 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
PHACTR4-202ENST00000373839 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-202ENST00000373839 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-202ENST00000373839 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
PHACTR4-202ENST00000373839 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 TPM3P06753 285 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 WIZO95785 1651 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 ATF3P18847 181 aa13.68□□□□□ -0.22
PHACTR4-202ENST00000373839 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
PHACTR4-202ENST00000373839 MSH5O43196 834 aa13.67□□□□□ -0.22
PHACTR4-202ENST00000373839 C9orf78Q9NZ63 289 aaPredicted RBP13.67□□□□□ -0.22
PHACTR4-202ENST00000373839 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
PHACTR4-202ENST00000373839 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
PHACTR4-202ENST00000373839 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
PHACTR4-202ENST00000373839 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
PHACTR4-202ENST00000373839 USP47Q96K76 1375 aa13.66□□□□□ -0.22
PHACTR4-202ENST00000373839 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
PHACTR4-202ENST00000373839 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
PHACTR4-202ENST00000373839 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
PHACTR4-202ENST00000373839 H3BQV1 296 aa13.65□□□□□ -0.22
PHACTR4-202ENST00000373839 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
PHACTR4-202ENST00000373839 CUX1P39880 1505 aa13.64□□□□□ -0.23
PHACTR4-202ENST00000373839 TPM2P07951 284 aa13.64□□□□□ -0.23
PHACTR4-202ENST00000373839 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
PHACTR4-202ENST00000373839 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
PHACTR4-202ENST00000373839 REC8O95072 547 aa13.63□□□□□ -0.23
PHACTR4-202ENST00000373839 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
PHACTR4-202ENST00000373839 TCEAL9Q9UHQ7 104 aa13.63□□□□□ -0.23
PHACTR4-202ENST00000373839 TSR1Q2NL82 804 aaKnown RBP13.63□□□□□ -0.23
PHACTR4-202ENST00000373839 AAMPQ13685 434 aa13.63□□□□□ -0.23
PHACTR4-202ENST00000373839 GOLGA6L3A6NEY3 463 aa13.62□□□□□ -0.23
PHACTR4-202ENST00000373839 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms