RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 EHBP1L1Q8N3D4 1523 aa24.04■■□□□ 1.44
CDKN1A-202ENST00000373711 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
CDKN1A-202ENST00000373711 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
CDKN1A-202ENST00000373711 TNRQ92752 1358 aa24.03■■□□□ 1.44
CDKN1A-202ENST00000373711 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
CDKN1A-202ENST00000373711 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
CDKN1A-202ENST00000373711 PZPP20742 1482 aa24.01■■□□□ 1.43
CDKN1A-202ENST00000373711 PIP4K2BP78356 416 aa24■■□□□ 1.43
CDKN1A-202ENST00000373711 MBD5Q9P267 1494 aa24■■□□□ 1.43
CDKN1A-202ENST00000373711 HSPA1LP34931 641 aa23.99■■□□□ 1.43
CDKN1A-202ENST00000373711 DEPDC5O75140 1603 aa23.97■■□□□ 1.43
CDKN1A-202ENST00000373711 ANKLE2Q86XL3 938 aa23.97■■□□□ 1.43
CDKN1A-202ENST00000373711 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
CDKN1A-202ENST00000373711 NLRP1Q9C000 1473 aa23.96■■□□□ 1.43
CDKN1A-202ENST00000373711 CEP162Q5TB80 1403 aa23.94■■□□□ 1.42
CDKN1A-202ENST00000373711 KIF3BO15066 747 aa23.94■■□□□ 1.42
CDKN1A-202ENST00000373711 THEMISQ8N1K5 641 aaPredicted RBP23.94■■□□□ 1.42
CDKN1A-202ENST00000373711 UGGT1Q9NYU2 1555 aa23.94■■□□□ 1.42
CDKN1A-202ENST00000373711 ZNF644Q9H582 1327 aaPredicted RBP23.93■■□□□ 1.42
CDKN1A-202ENST00000373711 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
CDKN1A-202ENST00000373711 VWDEQ8N2E2 1590 aa23.93■■□□□ 1.42
CDKN1A-202ENST00000373711 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
CDKN1A-202ENST00000373711 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
CDKN1A-202ENST00000373711 MED14O60244 1454 aa23.92■■□□□ 1.42
CDKN1A-202ENST00000373711 IQGAP1P46940 1657 aa23.92■■□□□ 1.42
CDKN1A-202ENST00000373711 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
CDKN1A-202ENST00000373711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
CDKN1A-202ENST00000373711 FBXO31Q5XUX0 539 aaPredicted RBP23.89■■□□□ 1.41
CDKN1A-202ENST00000373711 MIA2Q96PC5 1412 aa23.89■■□□□ 1.41
CDKN1A-202ENST00000373711 SYNMO15061 1565 aa23.89■■□□□ 1.41
CDKN1A-202ENST00000373711 ZC3H13Q5T200 1668 aaKnown RBP23.89■■□□□ 1.41
CDKN1A-202ENST00000373711 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
CDKN1A-202ENST00000373711 RNF17Q9BXT8 1623 aaKnown RBP23.87■■□□□ 1.41
CDKN1A-202ENST00000373711 ARHGEF5Q12774 1597 aa23.84■■□□□ 1.41
CDKN1A-202ENST00000373711 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
CDKN1A-202ENST00000373711 ALKQ9UM73 1620 aa23.81■■□□□ 1.4
CDKN1A-202ENST00000373711 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
CDKN1A-202ENST00000373711 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
CDKN1A-202ENST00000373711 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
CDKN1A-202ENST00000373711 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
CDKN1A-202ENST00000373711 LRRC7Q96NW7 1537 aa23.77■■□□□ 1.4
CDKN1A-202ENST00000373711 ABCC3O15438 1527 aa23.76■■□□□ 1.39
CDKN1A-202ENST00000373711 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
CDKN1A-202ENST00000373711 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
CDKN1A-202ENST00000373711 UBR1Q8IWV7 1749 aa23.73■■□□□ 1.39
CDKN1A-202ENST00000373711 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
CDKN1A-202ENST00000373711 CEP152O94986 1710 aa23.7■■□□□ 1.39
CDKN1A-202ENST00000373711 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
CDKN1A-202ENST00000373711 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CDKN1A-202ENST00000373711 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
CDKN1A-202ENST00000373711 SLIT1O75093 1534 aa23.64■■□□□ 1.37
CDKN1A-202ENST00000373711 XIRP1Q702N8 1843 aaKnown RBP23.62■■□□□ 1.37
CDKN1A-202ENST00000373711 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
CDKN1A-202ENST00000373711 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
CDKN1A-202ENST00000373711 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
CDKN1A-202ENST00000373711 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
CDKN1A-202ENST00000373711 TXNDC2Q86VQ3 553 aa23.57■■□□□ 1.36
CDKN1A-202ENST00000373711 PRDM15P57071 1507 aaPredicted RBP23.57■■□□□ 1.36
CDKN1A-202ENST00000373711 ARHGAP31Q2M1Z3 1444 aa23.57■■□□□ 1.36
CDKN1A-202ENST00000373711 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
CDKN1A-202ENST00000373711 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
CDKN1A-202ENST00000373711 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
CDKN1A-202ENST00000373711 PIK3C2BO00750 1634 aa23.53■■□□□ 1.36
CDKN1A-202ENST00000373711 ERBINQ96RT1 1412 aa23.52■■□□□ 1.36
CDKN1A-202ENST00000373711 LTKP29376 864 aa23.52■■□□□ 1.36
CDKN1A-202ENST00000373711 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
CDKN1A-202ENST00000373711 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
CDKN1A-202ENST00000373711 RGS17Q9UGC6 210 aaPredicted RBP23.49■■□□□ 1.35
CDKN1A-202ENST00000373711 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
CDKN1A-202ENST00000373711 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
CDKN1A-202ENST00000373711 ROBO1Q9Y6N7 1651 aa23.48■■□□□ 1.35
CDKN1A-202ENST00000373711 KANK1Q14678 1352 aa23.48■■□□□ 1.35
CDKN1A-202ENST00000373711 KIF15Q9NS87 1388 aa23.48■■□□□ 1.35
CDKN1A-202ENST00000373711 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
CDKN1A-202ENST00000373711 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
CDKN1A-202ENST00000373711 TMEM94Q12767 1356 aa23.45■■□□□ 1.34
CDKN1A-202ENST00000373711 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
CDKN1A-202ENST00000373711 KCNA6P17658 529 aa23.42■■□□□ 1.34
CDKN1A-202ENST00000373711 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
CDKN1A-202ENST00000373711 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.34
CDKN1A-202ENST00000373711 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
CDKN1A-202ENST00000373711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.332e-7■□□□□ 8
CDKN1A-202ENST00000373711 PHLPP1O60346 1717 aa23.39■■□□□ 1.33
CDKN1A-202ENST00000373711 TET3O43151 1660 aa23.38■■□□□ 1.33
CDKN1A-202ENST00000373711 PTPN23Q9H3S7 1636 aa23.38■■□□□ 1.33
CDKN1A-202ENST00000373711 MSH6P52701 1360 aa23.38■■□□□ 1.33
CDKN1A-202ENST00000373711 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
CDKN1A-202ENST00000373711 POTEAQ6S8J7 498 aa23.37■■□□□ 1.33
CDKN1A-202ENST00000373711 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
CDKN1A-202ENST00000373711 ABCC5O15440 1437 aa23.35■■□□□ 1.33
CDKN1A-202ENST00000373711 KANK4Q5T7N3 995 aaPredicted RBP23.33■■□□□ 1.33
CDKN1A-202ENST00000373711 DAPK1P53355 1430 aa23.33■■□□□ 1.32
CDKN1A-202ENST00000373711 JCADQ9P266 1359 aa23.32■■□□□ 1.32
CDKN1A-202ENST00000373711 IDI1Q13907 227 aa23.32■■□□□ 1.32
CDKN1A-202ENST00000373711 SLC26A8Q96RN1 970 aa23.32■■□□□ 1.32
CDKN1A-202ENST00000373711 SETD1AO15047 1707 aaKnown RBP23.32■■□□□ 1.32
CDKN1A-202ENST00000373711 ANKRD30AQ9BXX3 1397 aa23.31■■□□□ 1.32
CDKN1A-202ENST00000373711 BCANQ96GW7 911 aa23.3■■□□□ 1.32
CDKN1A-202ENST00000373711 CHD2O14647 1828 aaKnown RBP23.3■■□□□ 1.32
CDKN1A-202ENST00000373711 NOS1P29475 1434 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms