RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
HERC4-202ENST00000373700 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
HERC4-202ENST00000373700 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
HERC4-202ENST00000373700 LAS1LQ9Y4W2 734 aaKnown RBP10.24□□□□□ -0.77
HERC4-202ENST00000373700 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
HERC4-202ENST00000373700 MAP3K1Q13233 1512 aa10.23□□□□□ -0.77
HERC4-202ENST00000373700 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 ARXQ96QS3 562 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 NCOA1Q15788 1441 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 KTN1Q86UP2 1357 aaKnown RBP10.22□□□□□ -0.77
HERC4-202ENST00000373700 GPATCH8Q9UKJ3 1502 aaKnown RBP10.22□□□□□ -0.77
HERC4-202ENST00000373700 MINK1Q8N4C8 1332 aaPredicted RBP10.22□□□□□ -0.77
HERC4-202ENST00000373700 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
HERC4-202ENST00000373700 PLIN1O60240 522 aa10.21□□□□□ -0.77
HERC4-202ENST00000373700 DISP1Q96F81 1524 aa10.21□□□□□ -0.77
HERC4-202ENST00000373700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.21□□□□□ -0.783e-7■■■□□ 17.8
HERC4-202ENST00000373700 NUDCQ9Y266 331 aa10.21□□□□□ -0.78
HERC4-202ENST00000373700 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
HERC4-202ENST00000373700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■■■□□ 17.4
HERC4-202ENST00000373700 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
HERC4-202ENST00000373700 WDR62O43379 1518 aa10.2□□□□□ -0.78
HERC4-202ENST00000373700 ANKRD30BQ9BXX2 1392 aa10.19□□□□□ -0.78
HERC4-202ENST00000373700 CFAP53Q96M91 514 aa10.19□□□□□ -0.78
HERC4-202ENST00000373700 MAPKBP1O60336 1514 aa10.18□□□□□ -0.78
HERC4-202ENST00000373700 RALBP1Q15311 655 aa10.18□□□□□ -0.78
HERC4-202ENST00000373700 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
HERC4-202ENST00000373700 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
HERC4-202ENST00000373700 RAPGEF6Q8TEU7 1601 aa10.18□□□□□ -0.78
HERC4-202ENST00000373700 MAGI3Q5TCQ9 1506 aa10.18□□□□□ -0.78
HERC4-202ENST00000373700 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
HERC4-202ENST00000373700 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
HERC4-202ENST00000373700 PLEKHH2Q8IVE3 1493 aa10.17□□□□□ -0.78
HERC4-202ENST00000373700 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
HERC4-202ENST00000373700 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
HERC4-202ENST00000373700 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.785e-7■■■■□ 20.1
HERC4-202ENST00000373700 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
HERC4-202ENST00000373700 NOP58Q9Y2X3 529 aaKnown RBP10.16□□□□□ -0.78
HERC4-202ENST00000373700 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
HERC4-202ENST00000373700 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
HERC4-202ENST00000373700 A0A0G2JS52 829 aa10.15□□□□□ -0.78
HERC4-202ENST00000373700 PAK3O75914 559 aaPredicted RBP10.15□□□□□ -0.78
HERC4-202ENST00000373700 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.78
HERC4-202ENST00000373700 UPF2Q9HAU5 1272 aaKnown RBP10.15□□□□□ -0.78
HERC4-202ENST00000373700 ROCK1Q13464 1354 aa10.15□□□□□ -0.78
HERC4-202ENST00000373700 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
HERC4-202ENST00000373700 VGFO15240 615 aaPredicted RBP10.14□□□□□ -0.79
HERC4-202ENST00000373700 CNTLNQ9NXG0 1405 aa10.14□□□□□ -0.79
HERC4-202ENST00000373700 KIF14Q15058 1648 aa10.14□□□□□ -0.79
HERC4-202ENST00000373700 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
HERC4-202ENST00000373700 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
HERC4-202ENST00000373700 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
HERC4-202ENST00000373700 MAPK8IP3Q9UPT6 1336 aa10.13□□□□□ -0.79
HERC4-202ENST00000373700 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
HERC4-202ENST00000373700 NUP160Q12769 1436 aa10.13□□□□□ -0.79
HERC4-202ENST00000373700 HSP90AA1P07900 732 aaKnown RBP10.13□□□□□ -0.79
HERC4-202ENST00000373700 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
HERC4-202ENST00000373700 SLC12A5Q9H2X9 1139 aa10.12□□□□□ -0.79
HERC4-202ENST00000373700 FTSJ3Q8IY81 847 aaKnown RBP10.12□□□□□ -0.79
HERC4-202ENST00000373700 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
HERC4-202ENST00000373700 TRAPPC8Q9Y2L5 1435 aa10.11□□□□□ -0.79
HERC4-202ENST00000373700 ADGRL1O94910 1474 aa10.11□□□□□ -0.79
HERC4-202ENST00000373700 HDGFL2Q7Z4V5 671 aaPredicted RBP10.11□□□□□ -0.79
HERC4-202ENST00000373700 EIF3AQ14152 1382 aaKnown RBP10.1□□□□□ -0.79
HERC4-202ENST00000373700 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
HERC4-202ENST00000373700 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
HERC4-202ENST00000373700 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
HERC4-202ENST00000373700 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
HERC4-202ENST00000373700 CFAP43Q8NDM7 1665 aa10.1□□□□□ -0.79
HERC4-202ENST00000373700 APAF1O14727 1248 aa10.09□□□□□ -0.79
HERC4-202ENST00000373700 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
HERC4-202ENST00000373700 SYCP2Q9BX26 1530 aa10.09□□□□□ -0.79
HERC4-202ENST00000373700 FANCAO15360 1455 aa10.09□□□□□ -0.79
HERC4-202ENST00000373700 ADGRF5Q8IZF2 1346 aa10.09□□□□□ -0.79
HERC4-202ENST00000373700 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
HERC4-202ENST00000373700 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
HERC4-202ENST00000373700 SAMD9Q5K651 1589 aa10.08□□□□□ -0.8
HERC4-202ENST00000373700 ASXL2Q76L83 1435 aa10.08□□□□□ -0.8
HERC4-202ENST00000373700 LTV1Q96GA3 475 aaPredicted RBP10.08□□□□□ -0.8
HERC4-202ENST00000373700 SLC26A8Q96RN1 970 aa10.08□□□□□ -0.8
HERC4-202ENST00000373700 EID1Q9Y6B2 187 aa10.07□□□□□ -0.8
HERC4-202ENST00000373700 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
HERC4-202ENST00000373700 TXNDC2Q86VQ3 553 aa10.07□□□□□ -0.8
HERC4-202ENST00000373700 PRAM1Q96QH2 718 aa10.07□□□□□ -0.8
HERC4-202ENST00000373700 CRBNQ96SW2 442 aa10.07□□□□□ -0.8
HERC4-202ENST00000373700 ELL2O00472 640 aaPredicted RBP10.06□□□□□ -0.8
HERC4-202ENST00000373700 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
HERC4-202ENST00000373700 NGDNQ8NEJ9 315 aaKnown RBP10.06□□□□□ -0.8
HERC4-202ENST00000373700 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
HERC4-202ENST00000373700 ADAMTS8Q9UP79 889 aa10.06□□□□□ -0.8
HERC4-202ENST00000373700 RPRD2Q5VT52 1461 aaKnown RBP10.06□□□□□ -0.8
HERC4-202ENST00000373700 IDI1Q13907 227 aa10.06□□□□□ -0.8
HERC4-202ENST00000373700 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
HERC4-202ENST00000373700 ERBINQ96RT1 1412 aa10.06□□□□□ -0.8
HERC4-202ENST00000373700 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
HERC4-202ENST00000373700 NUTM2GQ5VZR2 741 aa10.05□□□□□ -0.8
HERC4-202ENST00000373700 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
HERC4-202ENST00000373700 RBM33Q96EV2 1170 aaKnown RBP10.05□□□□□ -0.8
HERC4-202ENST00000373700 EVC2Q86UK5 1308 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms