RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 HIRIP3Q9BW71 556 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-201ENST00000373386 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-201ENST00000373386 SHROOM2Q13796 1616 aa11.05□□□□□ -0.64
GARNL3-201ENST00000373386 WASHC2AQ641Q2 1341 aa11.05□□□□□ -0.64
GARNL3-201ENST00000373386 MAST1Q9Y2H9 1570 aa11.05□□□□□ -0.64
GARNL3-201ENST00000373386 PTPRGP23470 1445 aa11.05□□□□□ -0.64
GARNL3-201ENST00000373386 HSPA5P11021 654 aaKnown RBP11.04□□□□□ -0.64
GARNL3-201ENST00000373386 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-201ENST00000373386 CHMP7Q8WUX9 453 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-201ENST00000373386 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
GARNL3-201ENST00000373386 PREX2Q70Z35 1606 aa11.04□□□□□ -0.64
GARNL3-201ENST00000373386 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
GARNL3-201ENST00000373386 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
GARNL3-201ENST00000373386 ATP10BO94823 1461 aa11.04□□□□□ -0.64
GARNL3-201ENST00000373386 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
GARNL3-201ENST00000373386 CFDP1Q9UEE9 299 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-201ENST00000373386 JPH4Q96JJ6 628 aa11.02□□□□□ -0.64
GARNL3-201ENST00000373386 FBLN2P98095 1184 aa11.02□□□□□ -0.65
GARNL3-201ENST00000373386 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-201ENST00000373386 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
GARNL3-201ENST00000373386 CHD1O14646 1710 aa11.02□□□□□ -0.65
GARNL3-201ENST00000373386 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-201ENST00000373386 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
GARNL3-201ENST00000373386 ANKRD50Q9ULJ7 1429 aa11.01□□□□□ -0.65
GARNL3-201ENST00000373386 KDM5CP41229 1560 aa11.01□□□□□ -0.65
GARNL3-201ENST00000373386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
GARNL3-201ENST00000373386 TEX2Q8IWB9 1127 aa11□□□□□ -0.65
GARNL3-201ENST00000373386 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
GARNL3-201ENST00000373386 C9orf84Q5VXU9 1444 aa11□□□□□ -0.65
GARNL3-201ENST00000373386 ZNF644Q9H582 1327 aaPredicted RBP10.99□□□□□ -0.65
GARNL3-201ENST00000373386 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
GARNL3-201ENST00000373386 UNC13BO14795 1591 aa10.99□□□□□ -0.65
GARNL3-201ENST00000373386 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
GARNL3-201ENST00000373386 PLXNC1O60486 1568 aa10.99□□□□□ -0.65
GARNL3-201ENST00000373386 C11orf95C9JLR9 678 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-201ENST00000373386 LAMC1P11047 1609 aa10.98□□□□□ -0.65
GARNL3-201ENST00000373386 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
GARNL3-201ENST00000373386 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
GARNL3-201ENST00000373386 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
GARNL3-201ENST00000373386 SAMD9LQ8IVG5 1584 aa10.97□□□□□ -0.65
GARNL3-201ENST00000373386 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
GARNL3-201ENST00000373386 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
GARNL3-201ENST00000373386 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.65
GARNL3-201ENST00000373386 NBPF8Q3BBV2 869 aa10.96□□□□□ -0.66
GARNL3-201ENST00000373386 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.66
GARNL3-201ENST00000373386 CANXP27824 592 aaKnown RBP10.95□□□□□ -0.66
GARNL3-201ENST00000373386 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-201ENST00000373386 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
GARNL3-201ENST00000373386 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
GARNL3-201ENST00000373386 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
GARNL3-201ENST00000373386 E9PCH4 1651 aa10.94□□□□□ -0.66
GARNL3-201ENST00000373386 BCORL1Q5H9F3 1711 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-201ENST00000373386 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 IQGAP3Q86VI3 1631 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 MYO5CQ9NQX4 1742 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
GARNL3-201ENST00000373386 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-201ENST00000373386 CCDC9Q9Y3X0 531 aaKnown RBP10.93□□□□□ -0.66
GARNL3-201ENST00000373386 KIF7Q2M1P5 1343 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-201ENST00000373386 ATP10AO60312 1499 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 ABCC2Q92887 1545 aa10.93□□□□□ -0.66
GARNL3-201ENST00000373386 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-201ENST00000373386 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
GARNL3-201ENST00000373386 FAM135AQ9P2D6 1515 aa10.92□□□□□ -0.66
GARNL3-201ENST00000373386 UHRF1BP1LA0JNW5 1464 aa10.92□□□□□ -0.66
GARNL3-201ENST00000373386 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
GARNL3-201ENST00000373386 ARAP3Q8WWN8 1544 aa10.91□□□□□ -0.66
GARNL3-201ENST00000373386 DHX29Q7Z478 1369 aaKnown RBP10.91□□□□□ -0.66
GARNL3-201ENST00000373386 USP47Q96K76 1375 aa10.91□□□□□ -0.66
GARNL3-201ENST00000373386 KIF15Q9NS87 1388 aa10.91□□□□□ -0.66
GARNL3-201ENST00000373386 FOXD1Q16676 465 aa10.9□□□□□ -0.66
GARNL3-201ENST00000373386 TRPM1Q7Z4N2 1603 aa10.9□□□□□ -0.66
GARNL3-201ENST00000373386 TSPY4P0CV99 314 aa10.9□□□□□ -0.66
GARNL3-201ENST00000373386 TSPY10P0CW01 314 aa10.9□□□□□ -0.66
GARNL3-201ENST00000373386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.67
GARNL3-201ENST00000373386 EIF2AK4Q9P2K8 1649 aaKnown RBP10.89□□□□□ -0.67
GARNL3-201ENST00000373386 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 PKD2Q13563 968 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 NUP155O75694 1391 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 DUOX2Q9NRD8 1548 aa10.89□□□□□ -0.67
GARNL3-201ENST00000373386 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
GARNL3-201ENST00000373386 CLASP1Q7Z460 1538 aa10.87□□□□□ -0.67
GARNL3-201ENST00000373386 ZMYM4Q5VZL5 1548 aa10.87□□□□□ -0.67
GARNL3-201ENST00000373386 GPRASP1Q5JY77 1395 aa10.87□□□□□ -0.67
GARNL3-201ENST00000373386 NBR1Q14596 966 aa10.87□□□□□ -0.67
GARNL3-201ENST00000373386 SYCP2Q9BX26 1530 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 IGSF3O75054 1194 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 INSRP06213 1382 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
GARNL3-201ENST00000373386 CALD1Q05682 793 aaKnown RBP10.85□□□□□ -0.67
GARNL3-201ENST00000373386 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
GARNL3-201ENST00000373386 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-201ENST00000373386 ARHGAP5Q13017 1502 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms