RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
NCDN-203ENST00000373253 PPM1GO15355 546 aaPredicted RBP17.59■□□□□ 0.41
NCDN-203ENST00000373253 PLIN1O60240 522 aa17.59■□□□□ 0.41
NCDN-203ENST00000373253 WASHC2CQ9Y4E1 1318 aa17.58■□□□□ 0.41
NCDN-203ENST00000373253 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.41
NCDN-203ENST00000373253 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.41
NCDN-203ENST00000373253 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.4
NCDN-203ENST00000373253 ESF1Q9H501 851 aaKnown RBP17.58■□□□□ 0.4
NCDN-203ENST00000373253 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
NCDN-203ENST00000373253 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
NCDN-203ENST00000373253 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
NCDN-203ENST00000373253 KANK1Q14678 1352 aa17.56■□□□□ 0.4
NCDN-203ENST00000373253 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
NCDN-203ENST00000373253 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
NCDN-203ENST00000373253 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
NCDN-203ENST00000373253 NUP160Q12769 1436 aa17.53■□□□□ 0.4
NCDN-203ENST00000373253 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
NCDN-203ENST00000373253 PZPP20742 1482 aa17.5■□□□□ 0.39
NCDN-203ENST00000373253 DENND4BO75064 1496 aaPredicted RBP17.49■□□□□ 0.39
NCDN-203ENST00000373253 CCDC141Q6ZP82 1450 aa17.49■□□□□ 0.39
NCDN-203ENST00000373253 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
NCDN-203ENST00000373253 NBR1Q14596 966 aa17.48■□□□□ 0.39
NCDN-203ENST00000373253 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
NCDN-203ENST00000373253 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
NCDN-203ENST00000373253 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
NCDN-203ENST00000373253 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
NCDN-203ENST00000373253 RALBP1Q15311 655 aa17.48■□□□□ 0.39
NCDN-203ENST00000373253 POGKQ9P215 609 aa17.47■□□□□ 0.39
NCDN-203ENST00000373253 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
NCDN-203ENST00000373253 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
NCDN-203ENST00000373253 SOX12O15370 315 aa17.46■□□□□ 0.39
NCDN-203ENST00000373253 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.39
NCDN-203ENST00000373253 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
NCDN-203ENST00000373253 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
NCDN-203ENST00000373253 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
NCDN-203ENST00000373253 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
NCDN-203ENST00000373253 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
NCDN-203ENST00000373253 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
NCDN-203ENST00000373253 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
NCDN-203ENST00000373253 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
NCDN-203ENST00000373253 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
NCDN-203ENST00000373253 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
NCDN-203ENST00000373253 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
NCDN-203ENST00000373253 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
NCDN-203ENST00000373253 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
NCDN-203ENST00000373253 RGS3P49796 1198 aa17.4■□□□□ 0.38
NCDN-203ENST00000373253 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
NCDN-203ENST00000373253 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
NCDN-203ENST00000373253 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
NCDN-203ENST00000373253 APAF1O14727 1248 aa17.38■□□□□ 0.37
NCDN-203ENST00000373253 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
NCDN-203ENST00000373253 TEX14Q8IWB6 1497 aa17.38■□□□□ 0.37
NCDN-203ENST00000373253 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
NCDN-203ENST00000373253 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
NCDN-203ENST00000373253 BCL2L13Q9BXK5 485 aa17.36■□□□□ 0.37
NCDN-203ENST00000373253 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
NCDN-203ENST00000373253 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
NCDN-203ENST00000373253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.34■□□□□ 0.37
NCDN-203ENST00000373253 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.36
NCDN-203ENST00000373253 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.36
NCDN-203ENST00000373253 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.36
NCDN-203ENST00000373253 CLUAP1Q96AJ1 413 aa17.32■□□□□ 0.36
NCDN-203ENST00000373253 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
NCDN-203ENST00000373253 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
NCDN-203ENST00000373253 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
NCDN-203ENST00000373253 ITSN2Q9NZM3 1697 aa17.3■□□□□ 0.36
NCDN-203ENST00000373253 MBD5Q9P267 1494 aa17.3■□□□□ 0.36
NCDN-203ENST00000373253 PPP2R1AP30153 589 aa17.29■□□□□ 0.36
NCDN-203ENST00000373253 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
NCDN-203ENST00000373253 FANCAO15360 1455 aa17.29■□□□□ 0.36
NCDN-203ENST00000373253 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
NCDN-203ENST00000373253 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
NCDN-203ENST00000373253 PLCH2O75038 1416 aa17.28■□□□□ 0.36
NCDN-203ENST00000373253 TESK2Q96S53 571 aa17.28■□□□□ 0.36
NCDN-203ENST00000373253 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
NCDN-203ENST00000373253 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
NCDN-203ENST00000373253 ERBINQ96RT1 1412 aa17.27■□□□□ 0.36
NCDN-203ENST00000373253 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
NCDN-203ENST00000373253 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
NCDN-203ENST00000373253 ABCA8O94911 1581 aa17.26■□□□□ 0.35
NCDN-203ENST00000373253 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
NCDN-203ENST00000373253 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
NCDN-203ENST00000373253 NEFMP07197 916 aa17.26■□□□□ 0.35
NCDN-203ENST00000373253 C14orf37Q86TY3 774 aa17.25■□□□□ 0.35
NCDN-203ENST00000373253 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
NCDN-203ENST00000373253 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 CHD1O14646 1710 aa17.24■□□□□ 0.35
NCDN-203ENST00000373253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.35
NCDN-203ENST00000373253 ZBTB47Q9UFB7 747 aaPredicted RBP17.23■□□□□ 0.35
NCDN-203ENST00000373253 FBLN1P23142 703 aa17.23■□□□□ 0.35
NCDN-203ENST00000373253 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
NCDN-203ENST00000373253 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.23■□□□□ 0.35
NCDN-203ENST00000373253 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
NCDN-203ENST00000373253 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
NCDN-203ENST00000373253 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
NCDN-203ENST00000373253 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms