RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
PTPRT-204ENST00000373190 LMOD2Q6P5Q4 547 aa10.84□□□□□ -0.67
PTPRT-204ENST00000373190 BECN2A8MW95 431 aa10.84□□□□□ -0.67
PTPRT-204ENST00000373190 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
PTPRT-204ENST00000373190 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
PTPRT-204ENST00000373190 CCAR2Q8N163 923 aaKnown RBP10.84□□□□□ -0.67
PTPRT-204ENST00000373190 HDAC5Q9UQL6 1122 aa10.84□□□□□ -0.67
PTPRT-204ENST00000373190 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.67
PTPRT-204ENST00000373190 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
PTPRT-204ENST00000373190 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
PTPRT-204ENST00000373190 CREBRFQ8IUR6 639 aa10.83□□□□□ -0.68
PTPRT-204ENST00000373190 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
PTPRT-204ENST00000373190 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
PTPRT-204ENST00000373190 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
PTPRT-204ENST00000373190 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
PTPRT-204ENST00000373190 H3BQV1 296 aa10.82□□□□□ -0.68
PTPRT-204ENST00000373190 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
PTPRT-204ENST00000373190 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
PTPRT-204ENST00000373190 CUX2O14529 1486 aa10.82□□□□□ -0.68
PTPRT-204ENST00000373190 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
PTPRT-204ENST00000373190 TPM1P09493 284 aa10.81□□□□□ -0.68
PTPRT-204ENST00000373190 RASSF8Q8NHQ8 419 aa10.81□□□□□ -0.68
PTPRT-204ENST00000373190 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
PTPRT-204ENST00000373190 TSR1Q2NL82 804 aaKnown RBP10.81□□□□□ -0.68
PTPRT-204ENST00000373190 CHMP5Q9NZZ3 219 aa10.81□□□□□ -0.68
PTPRT-204ENST00000373190 LMOD3Q0VAK6 560 aa10.81□□□□□ -0.68
PTPRT-204ENST00000373190 SOX12O15370 315 aa10.81□□□□□ -0.68
PTPRT-204ENST00000373190 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTPRT-204ENST00000373190 EXOC6Q8TAG9 804 aa10.8□□□□□ -0.68
PTPRT-204ENST00000373190 NFKBIBQ15653 356 aa10.8□□□□□ -0.68
PTPRT-204ENST00000373190 ANKRD30AQ9BXX3 1397 aa10.8□□□□□ -0.68
PTPRT-204ENST00000373190 CHMP4CQ96CF2 233 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 ARGLU1Q9NWB6 273 aaPredicted RBP10.79□□□□□ -0.68
PTPRT-204ENST00000373190 CRBNQ96SW2 442 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 TPM2P07951 284 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 NASPP49321 788 aaPredicted RBP10.79□□□□□ -0.68
PTPRT-204ENST00000373190 MRE11P49959 708 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 NUP155O75694 1391 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 REC8O95072 547 aa10.79□□□□□ -0.68
PTPRT-204ENST00000373190 PLIN1O60240 522 aa10.78□□□□□ -0.68
PTPRT-204ENST00000373190 E9PSI1 815 aa10.78□□□□□ -0.68
PTPRT-204ENST00000373190 NCBP3Q53F19 620 aaKnown RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 TPD52L1Q16890 204 aaPredicted RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 FOXD4L6Q3SYB3 417 aaPredicted RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 FOXD4L3Q6VB84 417 aaPredicted RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 DHX57Q6P158 1386 aaKnown RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
PTPRT-204ENST00000373190 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.68
PTPRT-204ENST00000373190 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.68
PTPRT-204ENST00000373190 FAM184AQ8NB25 1140 aa10.77□□□□□ -0.68
PTPRT-204ENST00000373190 SLC4A10Q6U841 1118 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 PES1O00541 588 aaKnown RBP10.77□□□□□ -0.69
PTPRT-204ENST00000373190 GORABQ5T7V8 394 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 L3MBTL2Q969R5 705 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 CCDC66A2RUB6 948 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 NUCB2P80303 420 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 CEP89Q96ST8 783 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 PRKRIP1Q9H875 184 aaPredicted RBP10.77□□□□□ -0.69
PTPRT-204ENST00000373190 CCDC39Q9UFE4 941 aa10.77□□□□□ -0.69
PTPRT-204ENST00000373190 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
PTPRT-204ENST00000373190 ACBD3Q9H3P7 528 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 RILPL2Q969X0 211 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 WIZO95785 1651 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 IPO7O95373 1038 aaKnown RBP10.75□□□□□ -0.69
PTPRT-204ENST00000373190 TERF2IPQ9NYB0 399 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
PTPRT-204ENST00000373190 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
PTPRT-204ENST00000373190 AK7Q96M32 723 aa10.74□□□□□ -0.69
PTPRT-204ENST00000373190 PATL2C9JE40 543 aaKnown RBP10.74□□□□□ -0.69
PTPRT-204ENST00000373190 DDX19BQ9UMR2 479 aa10.74□□□□□ -0.69
PTPRT-204ENST00000373190 PDE4CQ08493 712 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 STK26Q9P289 416 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 HMGN5P82970 282 aaKnown RBP10.73□□□□□ -0.69
PTPRT-204ENST00000373190 USP47Q96K76 1375 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
PTPRT-204ENST00000373190 R3HCC1Q9Y3T6 440 aaKnown RBP10.73□□□□□ -0.69
PTPRT-204ENST00000373190 RUFY1Q96T51 708 aa10.72□□□□□ -0.69
PTPRT-204ENST00000373190 MNS1Q8NEH6 495 aa10.72□□□□□ -0.69
PTPRT-204ENST00000373190 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
PTPRT-204ENST00000373190 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
PTPRT-204ENST00000373190 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
PTPRT-204ENST00000373190 ANKRD20A12PQ8NF67 263 aa10.72□□□□□ -0.69
PTPRT-204ENST00000373190 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.69
PTPRT-204ENST00000373190 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
PTPRT-204ENST00000373190 ZKSCAN1P17029 563 aaPredicted RBP10.71□□□□□ -0.69
PTPRT-204ENST00000373190 TAF7LQ5H9L4 462 aa10.71□□□□□ -0.69
PTPRT-204ENST00000373190 RUFY2Q8WXA3 655 aa10.71□□□□□ -0.7
PTPRT-204ENST00000373190 AAMPQ13685 434 aa10.7□□□□□ -0.7
PTPRT-204ENST00000373190 PANK3Q9H999 370 aa10.7□□□□□ -0.7
PTPRT-204ENST00000373190 RRP7AQ9Y3A4 280 aaKnown RBP10.7□□□□□ -0.7
PTPRT-204ENST00000373190 SASS6Q6UVJ0 657 aa10.7□□□□□ -0.7
PTPRT-204ENST00000373190 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
PTPRT-204ENST00000373190 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
PTPRT-204ENST00000373190 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms