RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 IPO9Q96P70 1041 aaKnown RBP14.31□□□□□ -0.12
VCL-202ENST00000372755 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
VCL-202ENST00000372755 AMPHP49418 695 aa14.3□□□□□ -0.12
VCL-202ENST00000372755 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
VCL-202ENST00000372755 FRAT2O75474 233 aaPredicted RBP14.3□□□□□ -0.12
VCL-202ENST00000372755 ARID3AQ99856 593 aa14.29□□□□□ -0.12
VCL-202ENST00000372755 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
VCL-202ENST00000372755 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
VCL-202ENST00000372755 PDE4CQ08493 712 aa14.29□□□□□ -0.12
VCL-202ENST00000372755 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
VCL-202ENST00000372755 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
VCL-202ENST00000372755 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
VCL-202ENST00000372755 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
VCL-202ENST00000372755 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.12
VCL-202ENST00000372755 TSR1Q2NL82 804 aaKnown RBP14.26□□□□□ -0.13
VCL-202ENST00000372755 H3BQV1 296 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
VCL-202ENST00000372755 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 CCDC146Q8IYE0 955 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 KIF3BO15066 747 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
VCL-202ENST00000372755 TPM2P07951 284 aa14.25□□□□□ -0.13
VCL-202ENST00000372755 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
VCL-202ENST00000372755 SOGA1O94964 1423 aa14.24□□□□□ -0.13
VCL-202ENST00000372755 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
VCL-202ENST00000372755 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
VCL-202ENST00000372755 TPM1P09493 284 aa14.23□□□□□ -0.13
VCL-202ENST00000372755 PES1O00541 588 aaKnown RBP14.23□□□□□ -0.13
VCL-202ENST00000372755 LRRFIP1Q32MZ4 808 aaKnown RBP14.22□□□□□ -0.13
VCL-202ENST00000372755 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
VCL-202ENST00000372755 LTV1Q96GA3 475 aaPredicted RBP14.22□□□□□ -0.13
VCL-202ENST00000372755 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
VCL-202ENST00000372755 GOLGA6L19H0YKK7 550 aa14.22□□□□□ -0.13
VCL-202ENST00000372755 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
VCL-202ENST00000372755 SKOR2Q2VWA4 1001 aaPredicted RBP14.22□□□□□ -0.13
VCL-202ENST00000372755 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
VCL-202ENST00000372755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.136e-7■■■■□ 23.3
VCL-202ENST00000372755 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
VCL-202ENST00000372755 CCDC70Q6NSX1 233 aa14.21□□□□□ -0.13
VCL-202ENST00000372755 CENPQQ7L2Z9 268 aaPredicted RBP14.2□□□□□ -0.14
VCL-202ENST00000372755 RILPL2Q969X0 211 aa14.2□□□□□ -0.14
VCL-202ENST00000372755 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
VCL-202ENST00000372755 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
VCL-202ENST00000372755 BECN2A8MW95 431 aa14.19□□□□□ -0.14
VCL-202ENST00000372755 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
VCL-202ENST00000372755 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
VCL-202ENST00000372755 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
VCL-202ENST00000372755 CPLX2Q6PUV4 134 aaKnown RBP14.19□□□□□ -0.14
VCL-202ENST00000372755 L3MBTL2Q969R5 705 aa14.19□□□□□ -0.14
VCL-202ENST00000372755 GPS2Q13227 327 aa14.18□□□□□ -0.14
VCL-202ENST00000372755 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
VCL-202ENST00000372755 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
VCL-202ENST00000372755 UACAQ9BZF9 1416 aa14.17□□□□□ -0.14
VCL-202ENST00000372755 RUFY2Q8WXA3 655 aa14.17□□□□□ -0.14
VCL-202ENST00000372755 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
VCL-202ENST00000372755 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■□ 22.5
VCL-202ENST00000372755 CCDC47Q96A33 483 aaKnown RBP14.17□□□□□ -0.14
VCL-202ENST00000372755 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
VCL-202ENST00000372755 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
VCL-202ENST00000372755 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 NUTM2DQ5VT03 806 aaPredicted RBP14.16□□□□□ -0.14
VCL-202ENST00000372755 COG3Q96JB2 828 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 E9PSI1 815 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 TRIM29Q14134 588 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
VCL-202ENST00000372755 CCDC18Q5T9S5 1454 aa14.15□□□□□ -0.14
VCL-202ENST00000372755 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.14
VCL-202ENST00000372755 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
VCL-202ENST00000372755 CCAR2Q8N163 923 aaKnown RBP14.14□□□□□ -0.15
VCL-202ENST00000372755 CGNL1Q0VF96 1302 aa14.14□□□□□ -0.15
VCL-202ENST00000372755 ANKRD20A12PQ8NF67 263 aa14.14□□□□□ -0.15
VCL-202ENST00000372755 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
VCL-202ENST00000372755 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
VCL-202ENST00000372755 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
VCL-202ENST00000372755 IPO7O95373 1038 aaKnown RBP14.13□□□□□ -0.15
VCL-202ENST00000372755 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
VCL-202ENST00000372755 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
VCL-202ENST00000372755 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
VCL-202ENST00000372755 TEFQ10587 303 aa14.13□□□□□ -0.15
VCL-202ENST00000372755 REC8O95072 547 aa14.13□□□□□ -0.15
VCL-202ENST00000372755 HOOK1Q9UJC3 728 aaKnown RBP14.12□□□□□ -0.15
VCL-202ENST00000372755 EVC2Q86UK5 1308 aa14.12□□□□□ -0.15
VCL-202ENST00000372755 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
VCL-202ENST00000372755 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
VCL-202ENST00000372755 PANK3Q9H999 370 aa14.11□□□□□ -0.15
VCL-202ENST00000372755 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
VCL-202ENST00000372755 EVA1CP58658 441 aa14.11□□□□□ -0.15
VCL-202ENST00000372755 PCMTD1Q96MG8 357 aaPredicted RBP14.11□□□□□ -0.15
VCL-202ENST00000372755 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
VCL-202ENST00000372755 HSP90AA2PQ14568 343 aaPredicted RBP14.1□□□□□ -0.15
VCL-202ENST00000372755 C9orf78Q9NZ63 289 aaPredicted RBP14.1□□□□□ -0.15
VCL-202ENST00000372755 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
VCL-202ENST00000372755 ELL2O00472 640 aaPredicted RBP14.09□□□□□ -0.15
VCL-202ENST00000372755 CPLX1O14810 134 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 PDE4AP27815 886 aa14.09□□□□□ -0.15
VCL-202ENST00000372755 IFIT2P09913 472 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms