RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 TRAK1Q9UPV9 953 aa29.88■■■□□ 2.37
RAPGEF1-203ENST00000372195 EXOC6Q8TAG9 804 aa29.87■■■□□ 2.37
RAPGEF1-203ENST00000372195 TAF7LQ5H9L4 462 aa29.85■■■□□ 2.37
RAPGEF1-203ENST00000372195 PANK3Q9H999 370 aa29.85■■■□□ 2.37
RAPGEF1-203ENST00000372195 NLRP13Q86W25 1043 aa29.85■■■□□ 2.37
RAPGEF1-203ENST00000372195 NOC3LQ8WTT2 800 aaKnown RBP29.84■■■□□ 2.37
RAPGEF1-203ENST00000372195 GPATCH3Q96I76 525 aa29.84■■■□□ 2.37
RAPGEF1-203ENST00000372195 CRBNQ96SW2 442 aa29.83■■■□□ 2.37
RAPGEF1-203ENST00000372195 ST20-MTHFSA0A0A6YYL1 179 aa29.81■■■□□ 2.36
RAPGEF1-203ENST00000372195 HTATSF1O43719 755 aaKnown RBP29.81■■■□□ 2.36
RAPGEF1-203ENST00000372195 HMMRO75330 724 aa29.8■■■□□ 2.36
RAPGEF1-203ENST00000372195 RILPL2Q969X0 211 aa29.8■■■□□ 2.36
RAPGEF1-203ENST00000372195 CARMIL2Q6F5E8 1435 aa29.8■■■□□ 2.36
RAPGEF1-203ENST00000372195 TERF2IPQ9NYB0 399 aa29.79■■■□□ 2.36
RAPGEF1-203ENST00000372195 PDE4AP27815 886 aa29.79■■■□□ 2.36
RAPGEF1-203ENST00000372195 TPM4P67936 248 aa29.78■■■□□ 2.36
RAPGEF1-203ENST00000372195 ANO8Q9HCE9 1232 aaPredicted RBP29.78■■■□□ 2.36
RAPGEF1-203ENST00000372195 ANKRD45Q5TZF3 282 aa29.78■■■□□ 2.36
RAPGEF1-203ENST00000372195 KIF15Q9NS87 1388 aa29.77■■■□□ 2.36
RAPGEF1-203ENST00000372195 EFCAB2Q5VUJ9 269 aa29.76■■■□□ 2.36
RAPGEF1-203ENST00000372195 MYBBP1AQ9BQG0 1328 aaKnown RBP29.76■■■□□ 2.36
RAPGEF1-203ENST00000372195 AMPHP49418 695 aa29.76■■■□□ 2.36
RAPGEF1-203ENST00000372195 NGDNQ8NEJ9 315 aaKnown RBP29.76■■■□□ 2.35
RAPGEF1-203ENST00000372195 TOMM22Q9NS69 142 aa29.75■■■□□ 2.35
RAPGEF1-203ENST00000372195 WIZO95785 1651 aa29.74■■■□□ 2.35
RAPGEF1-203ENST00000372195 RASSF8Q8NHQ8 419 aa29.73■■■□□ 2.35
RAPGEF1-203ENST00000372195 TNNT3P45378 269 aaPredicted RBP29.73■■■□□ 2.35
RAPGEF1-203ENST00000372195 ST18O60284 1047 aa29.72■■■□□ 2.35
RAPGEF1-203ENST00000372195 COG6Q9Y2V7 657 aa29.71■■■□□ 2.35
RAPGEF1-203ENST00000372195 RRP1P56182 461 aaKnown RBP29.71■■■□□ 2.35
RAPGEF1-203ENST00000372195 PDE3BQ13370 1112 aa29.7■■■□□ 2.35
RAPGEF1-203ENST00000372195 DHX57Q6P158 1386 aaKnown RBP29.7■■■□□ 2.34
RAPGEF1-203ENST00000372195 WASHC2CQ9Y4E1 1318 aa29.69■■■□□ 2.34
RAPGEF1-203ENST00000372195 KIF16BQ96L93 1317 aa29.69■■■□□ 2.34
RAPGEF1-203ENST00000372195 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
RAPGEF1-203ENST00000372195 FAM161AQ3B820 660 aa29.68■■■□□ 2.34
RAPGEF1-203ENST00000372195 CENPQQ7L2Z9 268 aaPredicted RBP29.67■■■□□ 2.34
RAPGEF1-203ENST00000372195 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.66■■■□□ 2.34
RAPGEF1-203ENST00000372195 HSP90AA2PQ14568 343 aaPredicted RBP29.66■■■□□ 2.34
RAPGEF1-203ENST00000372195 CSPP1Q1MSJ5 1256 aa29.66■■■□□ 2.34
RAPGEF1-203ENST00000372195 NECTIN2Q92692 538 aa29.64■■■□□ 2.34
RAPGEF1-203ENST00000372195 DDX49Q9Y6V7 483 aaKnown RBP29.63■■■□□ 2.33
RAPGEF1-203ENST00000372195 PRKRIP1Q9H875 184 aaPredicted RBP29.62■■■□□ 2.33
RAPGEF1-203ENST00000372195 SF3A1Q15459 793 aaKnown RBP29.61■■■□□ 2.33
RAPGEF1-203ENST00000372195 DDX11L8A8MPP1 907 aa29.61■■■□□ 2.33
RAPGEF1-203ENST00000372195 NGEFQ8N5V2 710 aa29.61■■■□□ 2.33
RAPGEF1-203ENST00000372195 GSE1Q14687 1217 aa29.61■■■□□ 2.33
RAPGEF1-203ENST00000372195 H3BQV1 296 aa29.6■■■□□ 2.33
RAPGEF1-203ENST00000372195 IFFO2Q5TF58 517 aa29.6■■■□□ 2.33
RAPGEF1-203ENST00000372195 LMOD3Q0VAK6 560 aa29.6■■■□□ 2.33
RAPGEF1-203ENST00000372195 PES1O00541 588 aaKnown RBP29.59■■■□□ 2.33
RAPGEF1-203ENST00000372195 A0A0U1RQG5 324 aaPredicted RBP29.59■■■□□ 2.33
RAPGEF1-203ENST00000372195 APAF1O14727 1248 aa29.57■■■□□ 2.32
RAPGEF1-203ENST00000372195 PHF14O94880 888 aa29.57■■■□□ 2.32
RAPGEF1-203ENST00000372195 FRAT2O75474 233 aaPredicted RBP29.57■■■□□ 2.32
RAPGEF1-203ENST00000372195 PHLDB1Q86UU1 1377 aa29.57■■■□□ 2.32
RAPGEF1-203ENST00000372195 ZKSCAN2Q63HK3 967 aa29.56■■■□□ 2.32
RAPGEF1-203ENST00000372195 RUSC2Q8N2Y8 1516 aa29.56■■■□□ 2.32
RAPGEF1-203ENST00000372195 VPS53Q5VIR6 699 aa29.56■■■□□ 2.32
RAPGEF1-203ENST00000372195 CCDC144AA2RUR9 1427 aa29.54■■■□□ 2.32
RAPGEF1-203ENST00000372195 GOLGA6L1Q8N7Z2 621 aa29.53■■■□□ 2.32
RAPGEF1-203ENST00000372195 CCDC18Q5T9S5 1454 aa29.53■■■□□ 2.32
RAPGEF1-203ENST00000372195 VSIG10Q8N0Z9 540 aa29.53■■■□□ 2.32
RAPGEF1-203ENST00000372195 EIF2S2P20042 333 aaKnown RBP29.53■■■□□ 2.32
RAPGEF1-203ENST00000372195 USP47Q96K76 1375 aa29.53■■■□□ 2.32
RAPGEF1-203ENST00000372195 E9PSI1 815 aa29.52■■■□□ 2.32
RAPGEF1-203ENST00000372195 G3V3G9 751 aa29.52■■■□□ 2.32
RAPGEF1-203ENST00000372195 DCAF8Q5TAQ9 597 aa29.52■■■□□ 2.32
RAPGEF1-203ENST00000372195 EID1Q9Y6B2 187 aa29.52■■■□□ 2.32
RAPGEF1-203ENST00000372195 MCTP1Q6DN14 999 aa29.51■■■□□ 2.31
RAPGEF1-203ENST00000372195 FAM184AQ8NB25 1140 aa29.51■■■□□ 2.31
RAPGEF1-203ENST00000372195 ZBED9Q6R2W3 1325 aa29.51■■■□□ 2.31
RAPGEF1-203ENST00000372195 CCAR2Q8N163 923 aaKnown RBP29.51■■■□□ 2.31
RAPGEF1-203ENST00000372195 MINK1Q8N4C8 1332 aaPredicted RBP29.51■■■□□ 2.31
RAPGEF1-203ENST00000372195 TMX4Q9H1E5 349 aaPredicted RBP29.5■■■□□ 2.31
RAPGEF1-203ENST00000372195 RSPH6AQ9H0K4 717 aa29.48■■■□□ 2.31
RAPGEF1-203ENST00000372195 ZNF592Q92610 1267 aa29.48■■■□□ 2.31
RAPGEF1-203ENST00000372195 MARCH6O60337 910 aa29.47■■■□□ 2.31
RAPGEF1-203ENST00000372195 TPD52L1Q16890 204 aaPredicted RBP29.46■■■□□ 2.31
RAPGEF1-203ENST00000372195 CCDC34Q96HJ3 373 aa29.46■■■□□ 2.31
RAPGEF1-203ENST00000372195 COG3Q96JB2 828 aa29.46■■■□□ 2.31
RAPGEF1-203ENST00000372195 HDAC5Q9UQL6 1122 aa29.45■■■□□ 2.3
RAPGEF1-203ENST00000372195 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 GTF2E1P29083 439 aaPredicted RBP29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 FBXW7Q969H0 707 aa29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 USP35Q9P2H5 1018 aa29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 TPM3P06753 285 aa29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
RAPGEF1-203ENST00000372195 FOSBP53539 338 aa29.43■■■□□ 2.3
RAPGEF1-203ENST00000372195 BCL11BQ9C0K0 894 aaPredicted RBP29.43■■■□□ 2.3
RAPGEF1-203ENST00000372195 PRM3Q9NNZ6 103 aa29.43■■■□□ 2.3
RAPGEF1-203ENST00000372195 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
RAPGEF1-203ENST00000372195 CHMP4AQ9BY43 222 aa29.43■■■□□ 2.3
RAPGEF1-203ENST00000372195 GOLGA6L19H0YKK7 550 aa29.42■■■□□ 2.3
RAPGEF1-203ENST00000372195 ANO2Q9NQ90 1003 aa29.42■■■□□ 2.3
RAPGEF1-203ENST00000372195 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
RAPGEF1-203ENST00000372195 DIAPH3Q9NSV4 1193 aa29.41■■■□□ 2.3
RAPGEF1-203ENST00000372195 C1orf141Q5JVX7 400 aa29.4■■■□□ 2.3
RAPGEF1-203ENST00000372195 RIPK4P57078 832 aa29.39■■■□□ 2.29
RAPGEF1-203ENST00000372195 BECN2A8MW95 431 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms