RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
PREX1-201ENST00000371941 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
PREX1-201ENST00000371941 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
PREX1-201ENST00000371941 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
PREX1-201ENST00000371941 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.33
PREX1-201ENST00000371941 ZBED9Q6R2W3 1325 aa17.08■□□□□ 0.33
PREX1-201ENST00000371941 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.33
PREX1-201ENST00000371941 MS4A1P11836 297 aa17.08■□□□□ 0.32
PREX1-201ENST00000371941 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
PREX1-201ENST00000371941 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
PREX1-201ENST00000371941 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
PREX1-201ENST00000371941 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
PREX1-201ENST00000371941 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
PREX1-201ENST00000371941 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
PREX1-201ENST00000371941 NECTIN2Q92692 538 aa17.05■□□□□ 0.32
PREX1-201ENST00000371941 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
PREX1-201ENST00000371941 MINK1Q8N4C8 1332 aaPredicted RBP17.04■□□□□ 0.32
PREX1-201ENST00000371941 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
PREX1-201ENST00000371941 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
PREX1-201ENST00000371941 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
PREX1-201ENST00000371941 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
PREX1-201ENST00000371941 CFTRP13569 1480 aa17.01■□□□□ 0.31
PREX1-201ENST00000371941 NESP48681 1621 aa17.01■□□□□ 0.31
PREX1-201ENST00000371941 AKNAQ7Z591 1439 aa17■□□□□ 0.31
PREX1-201ENST00000371941 NBPF8Q3BBV2 869 aa17■□□□□ 0.31
PREX1-201ENST00000371941 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
PREX1-201ENST00000371941 ANKRD45Q5TZF3 282 aa16.99■□□□□ 0.31
PREX1-201ENST00000371941 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
PREX1-201ENST00000371941 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
PREX1-201ENST00000371941 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
PREX1-201ENST00000371941 NPHP1O15259 732 aa16.98■□□□□ 0.31
PREX1-201ENST00000371941 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
PREX1-201ENST00000371941 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
PREX1-201ENST00000371941 NBPF1Q3BBV0 1214 aa16.98■□□□□ 0.31
PREX1-201ENST00000371941 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
PREX1-201ENST00000371941 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
PREX1-201ENST00000371941 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
PREX1-201ENST00000371941 GOLGA6L4A6NEF3 574 aa16.96■□□□□ 0.31
PREX1-201ENST00000371941 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
PREX1-201ENST00000371941 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.31
PREX1-201ENST00000371941 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.3
PREX1-201ENST00000371941 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
PREX1-201ENST00000371941 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
PREX1-201ENST00000371941 MCCP23508 829 aa16.94■□□□□ 0.3
PREX1-201ENST00000371941 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
PREX1-201ENST00000371941 HMOX1P09601 288 aa16.94■□□□□ 0.3
PREX1-201ENST00000371941 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
PREX1-201ENST00000371941 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
PREX1-201ENST00000371941 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
PREX1-201ENST00000371941 TERF2IPQ9NYB0 399 aa16.93■□□□□ 0.3
PREX1-201ENST00000371941 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
PREX1-201ENST00000371941 PTPRGP23470 1445 aa16.92■□□□□ 0.3
PREX1-201ENST00000371941 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
PREX1-201ENST00000371941 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
PREX1-201ENST00000371941 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
PREX1-201ENST00000371941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
PREX1-201ENST00000371941 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
PREX1-201ENST00000371941 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
PREX1-201ENST00000371941 AMPHP49418 695 aa16.91■□□□□ 0.3
PREX1-201ENST00000371941 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
PREX1-201ENST00000371941 CUX1P39880 1505 aa16.9■□□□□ 0.3
PREX1-201ENST00000371941 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
PREX1-201ENST00000371941 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
PREX1-201ENST00000371941 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
PREX1-201ENST00000371941 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
PREX1-201ENST00000371941 E9PSI1 815 aa16.87■□□□□ 0.29
PREX1-201ENST00000371941 RIPK4P57078 832 aa16.87■□□□□ 0.29
PREX1-201ENST00000371941 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
PREX1-201ENST00000371941 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
PREX1-201ENST00000371941 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
PREX1-201ENST00000371941 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
PREX1-201ENST00000371941 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
PREX1-201ENST00000371941 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
PREX1-201ENST00000371941 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
PREX1-201ENST00000371941 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
PREX1-201ENST00000371941 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
PREX1-201ENST00000371941 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
PREX1-201ENST00000371941 BCAR3O75815 825 aa16.84■□□□□ 0.29
PREX1-201ENST00000371941 GSE1Q14687 1217 aa16.84■□□□□ 0.29
PREX1-201ENST00000371941 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
PREX1-201ENST00000371941 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
PREX1-201ENST00000371941 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
PREX1-201ENST00000371941 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
PREX1-201ENST00000371941 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
PREX1-201ENST00000371941 CALD1Q05682 793 aaKnown RBP16.82■□□□□ 0.28
PREX1-201ENST00000371941 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
PREX1-201ENST00000371941 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
PREX1-201ENST00000371941 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
PREX1-201ENST00000371941 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
PREX1-201ENST00000371941 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
PREX1-201ENST00000371941 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
PREX1-201ENST00000371941 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
PREX1-201ENST00000371941 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
PREX1-201ENST00000371941 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
PREX1-201ENST00000371941 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
PREX1-201ENST00000371941 MTHFSP49914 203 aa16.78■□□□□ 0.28
PREX1-201ENST00000371941 COG3Q96JB2 828 aa16.78■□□□□ 0.28
PREX1-201ENST00000371941 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
PREX1-201ENST00000371941 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
PREX1-201ENST00000371941 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms