RNA–Protein interactions for RNA: ENST00000371706.7

SEC16A-205, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC16A, Length 8,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-205ENST00000371706 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEC16A-205ENST00000371706 CCNB3Q8WWL7 1395 aa13.23□□□□□ -0.29
SEC16A-205ENST00000371706 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
SEC16A-205ENST00000371706 EIF3AQ14152 1382 aaKnown RBP13.23□□□□□ -0.29
SEC16A-205ENST00000371706 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
SEC16A-205ENST00000371706 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
SEC16A-205ENST00000371706 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
SEC16A-205ENST00000371706 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
SEC16A-205ENST00000371706 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
SEC16A-205ENST00000371706 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
SEC16A-205ENST00000371706 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
SEC16A-205ENST00000371706 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
SEC16A-205ENST00000371706 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.3
SEC16A-205ENST00000371706 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.3
SEC16A-205ENST00000371706 AMPHP49418 695 aa13.2□□□□□ -0.3
SEC16A-205ENST00000371706 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
SEC16A-205ENST00000371706 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
SEC16A-205ENST00000371706 GGT6Q6P531 493 aa13.19□□□□□ -0.3
SEC16A-205ENST00000371706 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
SEC16A-205ENST00000371706 TRIM29Q14134 588 aa13.19□□□□□ -0.3
SEC16A-205ENST00000371706 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
SEC16A-205ENST00000371706 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
SEC16A-205ENST00000371706 BECN2A8MW95 431 aa13.18□□□□□ -0.3
SEC16A-205ENST00000371706 ATP6V1DQ9Y5K8 247 aa13.18□□□□□ -0.3
SEC16A-205ENST00000371706 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
SEC16A-205ENST00000371706 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
SEC16A-205ENST00000371706 PAF1Q8N7H5 531 aa13.18□□□□□ -0.3
SEC16A-205ENST00000371706 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
SEC16A-205ENST00000371706 EPS15P42566 896 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 CPLX2Q6PUV4 134 aaKnown RBP13.17□□□□□ -0.3
SEC16A-205ENST00000371706 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 FBXW7Q969H0 707 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
SEC16A-205ENST00000371706 DEKP35659 375 aaKnown RBP13.17□□□□□ -0.3
SEC16A-205ENST00000371706 MCTP1Q6DN14 999 aa13.17□□□□□ -0.3
SEC16A-205ENST00000371706 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
SEC16A-205ENST00000371706 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
SEC16A-205ENST00000371706 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
SEC16A-205ENST00000371706 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
SEC16A-205ENST00000371706 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
SEC16A-205ENST00000371706 CDR1P51861 262 aa13.14□□□□□ -0.31
SEC16A-205ENST00000371706 APPP05067 770 aa13.14□□□□□ -0.31
SEC16A-205ENST00000371706 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
SEC16A-205ENST00000371706 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
SEC16A-205ENST00000371706 TEX35Q5T0J7 233 aa13.14□□□□□ -0.31
SEC16A-205ENST00000371706 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
SEC16A-205ENST00000371706 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
SEC16A-205ENST00000371706 AK7Q96M32 723 aa13.13□□□□□ -0.31
SEC16A-205ENST00000371706 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
SEC16A-205ENST00000371706 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-205ENST00000371706 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
SEC16A-205ENST00000371706 RILPL2Q969X0 211 aa13.12□□□□□ -0.31
SEC16A-205ENST00000371706 ERICH2A1L162 156 aa13.12□□□□□ -0.31
SEC16A-205ENST00000371706 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
SEC16A-205ENST00000371706 EEA1Q15075 1411 aa13.12□□□□□ -0.31
SEC16A-205ENST00000371706 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
SEC16A-205ENST00000371706 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-205ENST00000371706 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
SEC16A-205ENST00000371706 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
SEC16A-205ENST00000371706 TRDNQ13061 729 aa13.11□□□□□ -0.31
SEC16A-205ENST00000371706 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
SEC16A-205ENST00000371706 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
SEC16A-205ENST00000371706 MAP7D2Q96T17 732 aa13.1□□□□□ -0.31
SEC16A-205ENST00000371706 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
SEC16A-205ENST00000371706 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-205ENST00000371706 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
SEC16A-205ENST00000371706 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
SEC16A-205ENST00000371706 ZRSR2Q15696 482 aaKnown RBP13.09□□□□□ -0.31
SEC16A-205ENST00000371706 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
SEC16A-205ENST00000371706 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
SEC16A-205ENST00000371706 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
SEC16A-205ENST00000371706 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
SEC16A-205ENST00000371706 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
SEC16A-205ENST00000371706 CPLX1O14810 134 aa13.08□□□□□ -0.32
SEC16A-205ENST00000371706 C9orf78Q9NZ63 289 aaPredicted RBP13.08□□□□□ -0.32
SEC16A-205ENST00000371706 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
SEC16A-205ENST00000371706 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
SEC16A-205ENST00000371706 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
SEC16A-205ENST00000371706 ARHGAP35Q9NRY4 1499 aa13.07□□□□□ -0.32
SEC16A-205ENST00000371706 DIAPH3Q9NSV4 1193 aa13.06□□□□□ -0.32
SEC16A-205ENST00000371706 NFXL1Q6ZNB6 911 aa13.06□□□□□ -0.32
SEC16A-205ENST00000371706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC16A-205ENST00000371706 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
SEC16A-205ENST00000371706 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
SEC16A-205ENST00000371706 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
SEC16A-205ENST00000371706 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
SEC16A-205ENST00000371706 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
SEC16A-205ENST00000371706 NOM1Q5C9Z4 860 aaKnown RBP13.05□□□□□ -0.32
SEC16A-205ENST00000371706 RALBP1Q15311 655 aa13.05□□□□□ -0.32
SEC16A-205ENST00000371706 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
SEC16A-205ENST00000371706 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
SEC16A-205ENST00000371706 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
SEC16A-205ENST00000371706 OFD1O75665 1012 aa13.04□□□□□ -0.32
SEC16A-205ENST00000371706 ACBD3Q9H3P7 528 aa13.03□□□□□ -0.32
SEC16A-205ENST00000371706 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEC16A-205ENST00000371706 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
SEC16A-205ENST00000371706 TEFQ10587 303 aa13.03□□□□□ -0.32
SEC16A-205ENST00000371706 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms