RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 GGT6Q6P531 493 aa23.9■■□□□ 1.42
SS18L1-202ENST00000370848 A2ML1A8K2U0 1454 aa23.89■■□□□ 1.42
SS18L1-202ENST00000370848 PZPP20742 1482 aa23.89■■□□□ 1.42
SS18L1-202ENST00000370848 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
SS18L1-202ENST00000370848 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
SS18L1-202ENST00000370848 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
SS18L1-202ENST00000370848 DNMT1P26358 1616 aaKnown RBP23.87■■□□□ 1.41
SS18L1-202ENST00000370848 EIF2AK4Q9P2K8 1649 aaKnown RBP23.86■■□□□ 1.41
SS18L1-202ENST00000370848 PKD2Q13563 968 aa23.84■■□□□ 1.41
SS18L1-202ENST00000370848 MYOM3Q5VTT5 1437 aa23.84■■□□□ 1.41
SS18L1-202ENST00000370848 ZC3H13Q5T200 1668 aaKnown RBP23.83■■□□□ 1.41
SS18L1-202ENST00000370848 KIF3BO15066 747 aa23.8■■□□□ 1.4
SS18L1-202ENST00000370848 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
SS18L1-202ENST00000370848 MROH1Q8NDA8 1641 aa23.79■■□□□ 1.4
SS18L1-202ENST00000370848 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
SS18L1-202ENST00000370848 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
SS18L1-202ENST00000370848 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
SS18L1-202ENST00000370848 TNRQ92752 1358 aa23.78■■□□□ 1.4
SS18L1-202ENST00000370848 NLRP1Q9C000 1473 aa23.77■■□□□ 1.4
SS18L1-202ENST00000370848 NCKAP5LQ9HCH0 1330 aa23.77■■□□□ 1.4
SS18L1-202ENST00000370848 ABCC3O15438 1527 aa23.76■■□□□ 1.39
SS18L1-202ENST00000370848 SHANK2Q9UPX8 1470 aa23.75■■□□□ 1.39
SS18L1-202ENST00000370848 SPATA31D1Q6ZQQ2 1576 aa23.75■■□□□ 1.39
SS18L1-202ENST00000370848 APLP2Q06481 763 aa23.75■■□□□ 1.39
SS18L1-202ENST00000370848 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
SS18L1-202ENST00000370848 WASHC2CQ9Y4E1 1318 aa23.73■■□□□ 1.39
SS18L1-202ENST00000370848 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
SS18L1-202ENST00000370848 DEPDC5O75140 1603 aa23.72■■□□□ 1.39
SS18L1-202ENST00000370848 FBXO31Q5XUX0 539 aaPredicted RBP23.71■■□□□ 1.39
SS18L1-202ENST00000370848 MED14O60244 1454 aa23.7■■□□□ 1.38
SS18L1-202ENST00000370848 ZNF335Q9H4Z2 1342 aaPredicted RBP23.7■■□□□ 1.38
SS18L1-202ENST00000370848 PRDM15P57071 1507 aaPredicted RBP23.69■■□□□ 1.38
SS18L1-202ENST00000370848 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
SS18L1-202ENST00000370848 PTPN23Q9H3S7 1636 aa23.67■■□□□ 1.38
SS18L1-202ENST00000370848 ERVK-7P63135 1459 aa23.66■■□□□ 1.38
SS18L1-202ENST00000370848 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
SS18L1-202ENST00000370848 ABCC5O15440 1437 aa23.65■■□□□ 1.38
SS18L1-202ENST00000370848 CPS1P31327 1500 aa23.64■■□□□ 1.38
SS18L1-202ENST00000370848 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
SS18L1-202ENST00000370848 CEP152O94986 1710 aa23.64■■□□□ 1.37
SS18L1-202ENST00000370848 VWDEQ8N2E2 1590 aa23.62■■□□□ 1.37
SS18L1-202ENST00000370848 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
SS18L1-202ENST00000370848 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
SS18L1-202ENST00000370848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.376e-8■■■■□ 21.9
SS18L1-202ENST00000370848 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
SS18L1-202ENST00000370848 DAPK1P53355 1430 aa23.59■■□□□ 1.37
SS18L1-202ENST00000370848 UBR1Q8IWV7 1749 aa23.58■■□□□ 1.37
SS18L1-202ENST00000370848 IQGAP1P46940 1657 aa23.57■■□□□ 1.36
SS18L1-202ENST00000370848 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
SS18L1-202ENST00000370848 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
SS18L1-202ENST00000370848 NPHP4O75161 1426 aaPredicted RBP23.56■■□□□ 1.36
SS18L1-202ENST00000370848 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
SS18L1-202ENST00000370848 ARHGAP23Q9P227 1491 aa23.54■■□□□ 1.36
SS18L1-202ENST00000370848 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
SS18L1-202ENST00000370848 KDM5AP29375 1690 aaKnown RBP23.53■■□□□ 1.36
SS18L1-202ENST00000370848 SLIT1O75093 1534 aa23.53■■□□□ 1.36
SS18L1-202ENST00000370848 SYNMO15061 1565 aa23.49■■□□□ 1.35
SS18L1-202ENST00000370848 UBAP1LF5GYI3 381 aa23.48■■□□□ 1.35
SS18L1-202ENST00000370848 ALKQ9UM73 1620 aa23.48■■□□□ 1.35
SS18L1-202ENST00000370848 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
SS18L1-202ENST00000370848 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
SS18L1-202ENST00000370848 DISP3Q9P2K9 1392 aa23.46■■□□□ 1.35
SS18L1-202ENST00000370848 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.34
SS18L1-202ENST00000370848 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
SS18L1-202ENST00000370848 PIK3C2BO00750 1634 aa23.44■■□□□ 1.34
SS18L1-202ENST00000370848 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
SS18L1-202ENST00000370848 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
SS18L1-202ENST00000370848 KANK1Q14678 1352 aa23.41■■□□□ 1.34
SS18L1-202ENST00000370848 NOS1P29475 1434 aa23.41■■□□□ 1.34
SS18L1-202ENST00000370848 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
SS18L1-202ENST00000370848 ILDR2Q71H61 639 aa23.38■■□□□ 1.33
SS18L1-202ENST00000370848 TOM1O60784 492 aa23.37■■□□□ 1.33
SS18L1-202ENST00000370848 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
SS18L1-202ENST00000370848 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
SS18L1-202ENST00000370848 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
SS18L1-202ENST00000370848 LTKP29376 864 aa23.34■■□□□ 1.33
SS18L1-202ENST00000370848 ADGRB3O60242 1522 aa23.33■■□□□ 1.32
SS18L1-202ENST00000370848 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
SS18L1-202ENST00000370848 TET3O43151 1660 aa23.32■■□□□ 1.32
SS18L1-202ENST00000370848 UNC13BO14795 1591 aa23.31■■□□□ 1.32
SS18L1-202ENST00000370848 XIRP1Q702N8 1843 aaKnown RBP23.31■■□□□ 1.32
SS18L1-202ENST00000370848 CHIC2Q9UKJ5 165 aa23.3■■□□□ 1.32
SS18L1-202ENST00000370848 SOCS7O14512 581 aa23.29■■□□□ 1.32
SS18L1-202ENST00000370848 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
SS18L1-202ENST00000370848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.325e-8■■□□□ 11.7
SS18L1-202ENST00000370848 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
SS18L1-202ENST00000370848 HSPA1LP34931 641 aa23.27■■□□□ 1.32
SS18L1-202ENST00000370848 IDI1Q13907 227 aa23.27■■□□□ 1.32
SS18L1-202ENST00000370848 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
SS18L1-202ENST00000370848 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
SS18L1-202ENST00000370848 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
SS18L1-202ENST00000370848 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
SS18L1-202ENST00000370848 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
SS18L1-202ENST00000370848 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
SS18L1-202ENST00000370848 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
SS18L1-202ENST00000370848 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
SS18L1-202ENST00000370848 TMEM131LA2VDJ0 1609 aa23.2■■□□□ 1.3
SS18L1-202ENST00000370848 NKTRP30414 1462 aaKnown RBP23.19■■□□□ 1.3
SS18L1-202ENST00000370848 E9PCH4 1651 aa23.18■■□□□ 1.3
SS18L1-202ENST00000370848 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms