RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 NUP155O75694 1391 aa14.44□□□□□ -0.1
PLXNA3-201ENST00000369682 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 FOSBP53539 338 aa14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 ZNF592Q92610 1267 aa14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 PANK3Q9H999 370 aa14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
PLXNA3-201ENST00000369682 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
PLXNA3-201ENST00000369682 MPNDQ8N594 471 aa14.42□□□□□ -0.1
PLXNA3-201ENST00000369682 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
PLXNA3-201ENST00000369682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.41□□□□□ -0.1
PLXNA3-201ENST00000369682 CCAR2Q8N163 923 aaKnown RBP14.41□□□□□ -0.1
PLXNA3-201ENST00000369682 KAT6BQ8WYB5 2073 aa14.41□□□□□ -0.1
PLXNA3-201ENST00000369682 NFKBIBQ15653 356 aa14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 PMFBP1Q8TBY8 1022 aa14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 DDX49Q9Y6V7 483 aaKnown RBP14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 ZNF771Q7L3S4 317 aaPredicted RBP14.4□□□□□ -0.1
PLXNA3-201ENST00000369682 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
PLXNA3-201ENST00000369682 RBM10P98175 930 aaKnown RBP14.39□□□□□ -0.11
PLXNA3-201ENST00000369682 KIF15Q9NS87 1388 aa14.39□□□□□ -0.11
PLXNA3-201ENST00000369682 PRKRIP1Q9H875 184 aaPredicted RBP14.39□□□□□ -0.11
PLXNA3-201ENST00000369682 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
PLXNA3-201ENST00000369682 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 NPHP1O15259 732 aa14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
PLXNA3-201ENST00000369682 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 CCDC18Q5T9S5 1454 aa14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 MSH5O43196 834 aa14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
PLXNA3-201ENST00000369682 USP47Q96K76 1375 aa14.36□□□□□ -0.11
PLXNA3-201ENST00000369682 RILPL2Q969X0 211 aa14.36□□□□□ -0.11
PLXNA3-201ENST00000369682 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
PLXNA3-201ENST00000369682 MYBBP1AQ9BQG0 1328 aaKnown RBP14.36□□□□□ -0.11
PLXNA3-201ENST00000369682 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
PLXNA3-201ENST00000369682 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
PLXNA3-201ENST00000369682 NECTIN2Q92692 538 aa14.34□□□□□ -0.11
PLXNA3-201ENST00000369682 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
PLXNA3-201ENST00000369682 PTMSP20962 102 aa14.34□□□□□ -0.11
PLXNA3-201ENST00000369682 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
PLXNA3-201ENST00000369682 MCTP1Q6DN14 999 aa14.33□□□□□ -0.12
PLXNA3-201ENST00000369682 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 PKNOX2Q96KN3 472 aa14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 R3HCC1Q9Y3T6 440 aaKnown RBP14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 GGT6Q6P531 493 aa14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 APAF1O14727 1248 aa14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 PATL2C9JE40 543 aaKnown RBP14.32□□□□□ -0.12
PLXNA3-201ENST00000369682 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
PLXNA3-201ENST00000369682 ANKRD30AQ9BXX3 1397 aa14.31□□□□□ -0.12
PLXNA3-201ENST00000369682 RNF214Q8ND24 703 aa14.3□□□□□ -0.12
PLXNA3-201ENST00000369682 EIF3AQ14152 1382 aaKnown RBP14.29□□□□□ -0.12
PLXNA3-201ENST00000369682 ST18O60284 1047 aa14.29□□□□□ -0.12
PLXNA3-201ENST00000369682 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
PLXNA3-201ENST00000369682 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
PLXNA3-201ENST00000369682 KIF7Q2M1P5 1343 aa14.28□□□□□ -0.12
PLXNA3-201ENST00000369682 HDGFL2Q7Z4V5 671 aaPredicted RBP14.28□□□□□ -0.12
PLXNA3-201ENST00000369682 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
PLXNA3-201ENST00000369682 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
PLXNA3-201ENST00000369682 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 KDM4AO75164 1064 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 PHF14O94880 888 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
PLXNA3-201ENST00000369682 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
PLXNA3-201ENST00000369682 PES1O00541 588 aaKnown RBP14.25□□□□□ -0.13
PLXNA3-201ENST00000369682 KIF21BO75037 1637 aa14.25□□□□□ -0.13
PLXNA3-201ENST00000369682 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
PLXNA3-201ENST00000369682 NASPP49321 788 aaPredicted RBP14.24□□□□□ -0.13
PLXNA3-201ENST00000369682 STK31Q9BXU1 1019 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 GOLGA6L1Q8N7Z2 621 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 C22orf23Q9BZE7 217 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 H3BQV1 296 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
PLXNA3-201ENST00000369682 CNTLNQ9NXG0 1405 aa14.22□□□□□ -0.13
PLXNA3-201ENST00000369682 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
PLXNA3-201ENST00000369682 TOMM22Q9NS69 142 aa14.22□□□□□ -0.13
PLXNA3-201ENST00000369682 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
PLXNA3-201ENST00000369682 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
PLXNA3-201ENST00000369682 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
PLXNA3-201ENST00000369682 CAVIN1Q6NZI2 390 aaKnown RBP14.21□□□□□ -0.14
PLXNA3-201ENST00000369682 C1orf115Q9H7X2 142 aa14.21□□□□□ -0.14
PLXNA3-201ENST00000369682 ANO2Q9NQ90 1003 aa14.21□□□□□ -0.14
PLXNA3-201ENST00000369682 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
PLXNA3-201ENST00000369682 RASSF8Q8NHQ8 419 aa14.2□□□□□ -0.14
PLXNA3-201ENST00000369682 PRDM10Q9NQV6 1147 aa14.2□□□□□ -0.14
PLXNA3-201ENST00000369682 CCDC27Q2M243 656 aa14.2□□□□□ -0.14
PLXNA3-201ENST00000369682 HMMRO75330 724 aa14.2□□□□□ -0.14
PLXNA3-201ENST00000369682 CUX1P39880 1505 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms