RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
HIPK1-203ENST00000369553 IPO9Q96P70 1041 aaKnown RBP14.04□□□□□ -0.16
HIPK1-203ENST00000369553 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
HIPK1-203ENST00000369553 ADGRL2O95490 1459 aa14.04□□□□□ -0.16
HIPK1-203ENST00000369553 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
HIPK1-203ENST00000369553 LAS1LQ9Y4W2 734 aaKnown RBP14.04□□□□□ -0.16
HIPK1-203ENST00000369553 ARHGEF5Q12774 1597 aa14.03□□□□□ -0.16
HIPK1-203ENST00000369553 GTF2E1P29083 439 aaPredicted RBP14.03□□□□□ -0.16
HIPK1-203ENST00000369553 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.17
HIPK1-203ENST00000369553 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.17
HIPK1-203ENST00000369553 HSP90AA1P07900 732 aaKnown RBP14.01□□□□□ -0.17
HIPK1-203ENST00000369553 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
HIPK1-203ENST00000369553 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
HIPK1-203ENST00000369553 SYCP2Q9BX26 1530 aa14.01□□□□□ -0.17
HIPK1-203ENST00000369553 PLCH2O75038 1416 aa14.01□□□□□ -0.17
HIPK1-203ENST00000369553 C9orf84Q5VXU9 1444 aa14.01□□□□□ -0.17
HIPK1-203ENST00000369553 ASXL2Q76L83 1435 aa13.99□□□□□ -0.17
HIPK1-203ENST00000369553 ANKRD30AQ9BXX3 1397 aa13.99□□□□□ -0.17
HIPK1-203ENST00000369553 ANP32AP39687 249 aaKnown RBP13.99□□□□□ -0.17
HIPK1-203ENST00000369553 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
HIPK1-203ENST00000369553 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
HIPK1-203ENST00000369553 BRD2P25440 801 aaKnown RBP13.98□□□□□ -0.17
HIPK1-203ENST00000369553 GSE1Q14687 1217 aa13.98□□□□□ -0.17
HIPK1-203ENST00000369553 FOXD1Q16676 465 aa13.97□□□□□ -0.17
HIPK1-203ENST00000369553 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
HIPK1-203ENST00000369553 TSPY4P0CV99 314 aa13.96□□□□□ -0.17
HIPK1-203ENST00000369553 TSPY10P0CW01 314 aa13.96□□□□□ -0.17
HIPK1-203ENST00000369553 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.17
HIPK1-203ENST00000369553 MPHOSPH9Q99550 1183 aa13.96□□□□□ -0.17
HIPK1-203ENST00000369553 ABCA9Q8IUA7 1624 aa13.96□□□□□ -0.17
HIPK1-203ENST00000369553 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
HIPK1-203ENST00000369553 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
HIPK1-203ENST00000369553 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
HIPK1-203ENST00000369553 ABCC1P33527 1531 aa13.94□□□□□ -0.18
HIPK1-203ENST00000369553 MAST1Q9Y2H9 1570 aa13.94□□□□□ -0.18
HIPK1-203ENST00000369553 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
HIPK1-203ENST00000369553 STAC3Q96MF2 364 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
HIPK1-203ENST00000369553 IPO4Q8TEX9 1081 aaKnown RBP13.93□□□□□ -0.18
HIPK1-203ENST00000369553 PZPP20742 1482 aa13.93□□□□□ -0.18
HIPK1-203ENST00000369553 KIF15Q9NS87 1388 aa13.92□□□□□ -0.18
HIPK1-203ENST00000369553 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
HIPK1-203ENST00000369553 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
HIPK1-203ENST00000369553 FRAT1Q92837 279 aaPredicted RBP13.92□□□□□ -0.18
HIPK1-203ENST00000369553 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
HIPK1-203ENST00000369553 TRAPPC8Q9Y2L5 1435 aa13.91□□□□□ -0.18
HIPK1-203ENST00000369553 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
HIPK1-203ENST00000369553 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
HIPK1-203ENST00000369553 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
HIPK1-203ENST00000369553 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
HIPK1-203ENST00000369553 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
HIPK1-203ENST00000369553 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
HIPK1-203ENST00000369553 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
HIPK1-203ENST00000369553 FANCAO15360 1455 aa13.88□□□□□ -0.19
HIPK1-203ENST00000369553 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
HIPK1-203ENST00000369553 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
HIPK1-203ENST00000369553 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
HIPK1-203ENST00000369553 B4GALNT3Q6L9W6 998 aa13.86□□□□□ -0.19
HIPK1-203ENST00000369553 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
HIPK1-203ENST00000369553 ANKRD30BQ9BXX2 1392 aa13.86□□□□□ -0.19
HIPK1-203ENST00000369553 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
HIPK1-203ENST00000369553 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
HIPK1-203ENST00000369553 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
HIPK1-203ENST00000369553 NUP155O75694 1391 aa13.84□□□□□ -0.19
HIPK1-203ENST00000369553 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
HIPK1-203ENST00000369553 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
HIPK1-203ENST00000369553 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
HIPK1-203ENST00000369553 SCAPERQ9BY12 1400 aa13.82□□□□□ -0.2
HIPK1-203ENST00000369553 PKD2Q13563 968 aa13.82□□□□□ -0.2
HIPK1-203ENST00000369553 ZFYVE16Q7Z3T8 1539 aa13.82□□□□□ -0.2
HIPK1-203ENST00000369553 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
HIPK1-203ENST00000369553 SPAG9O60271 1321 aaKnown RBP13.81□□□□□ -0.2
HIPK1-203ENST00000369553 UNC13BO14795 1591 aa13.81□□□□□ -0.2
HIPK1-203ENST00000369553 CNGB1Q14028 1251 aaPredicted RBP13.81□□□□□ -0.2
HIPK1-203ENST00000369553 RPRD2Q5VT52 1461 aaKnown RBP13.8□□□□□ -0.2
HIPK1-203ENST00000369553 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
HIPK1-203ENST00000369553 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
HIPK1-203ENST00000369553 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
HIPK1-203ENST00000369553 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
HIPK1-203ENST00000369553 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
HIPK1-203ENST00000369553 SECISBP2LQ93073 1101 aaKnown RBP13.79□□□□□ -0.2
HIPK1-203ENST00000369553 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
HIPK1-203ENST00000369553 ATP7AQ04656 1500 aa13.78□□□□□ -0.2
HIPK1-203ENST00000369553 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
HIPK1-203ENST00000369553 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
HIPK1-203ENST00000369553 L3MBTL2Q969R5 705 aa13.77□□□□□ -0.21
HIPK1-203ENST00000369553 CFAP74Q9C0B2 1584 aa13.76□□□□□ -0.21
HIPK1-203ENST00000369553 ZNF830Q96NB3 372 aaPredicted RBP13.76□□□□□ -0.21
HIPK1-203ENST00000369553 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
HIPK1-203ENST00000369553 VGLL3A8MV65 326 aa13.76□□□□□ -0.21
HIPK1-203ENST00000369553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
HIPK1-203ENST00000369553 TEX14Q8IWB6 1497 aa13.75□□□□□ -0.21
HIPK1-203ENST00000369553 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
HIPK1-203ENST00000369553 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
HIPK1-203ENST00000369553 FTSJ3Q8IY81 847 aaKnown RBP13.75□□□□□ -0.21
HIPK1-203ENST00000369553 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 768 ms