RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 KTN1Q86UP2 1357 aaKnown RBP16.17■□□□□ 0.18
PHGDH-201ENST00000369407 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
PHGDH-201ENST00000369407 KIF14Q15058 1648 aa16.16■□□□□ 0.18
PHGDH-201ENST00000369407 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
PHGDH-201ENST00000369407 RGS3P49796 1198 aa16.16■□□□□ 0.18
PHGDH-201ENST00000369407 PDE3BQ13370 1112 aa16.16■□□□□ 0.18
PHGDH-201ENST00000369407 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
PHGDH-201ENST00000369407 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.18
PHGDH-201ENST00000369407 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
PHGDH-201ENST00000369407 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
PHGDH-201ENST00000369407 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
PHGDH-201ENST00000369407 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-201ENST00000369407 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
PHGDH-201ENST00000369407 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-201ENST00000369407 PANK3Q9H999 370 aa16.12■□□□□ 0.17
PHGDH-201ENST00000369407 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
PHGDH-201ENST00000369407 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
PHGDH-201ENST00000369407 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
PHGDH-201ENST00000369407 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
PHGDH-201ENST00000369407 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
PHGDH-201ENST00000369407 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
PHGDH-201ENST00000369407 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
PHGDH-201ENST00000369407 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■■□ 23.7
PHGDH-201ENST00000369407 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
PHGDH-201ENST00000369407 FBLN2P98095 1184 aa16.06■□□□□ 0.16
PHGDH-201ENST00000369407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.165e-16■■□□□ 13.6
PHGDH-201ENST00000369407 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
PHGDH-201ENST00000369407 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
PHGDH-201ENST00000369407 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
PHGDH-201ENST00000369407 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-201ENST00000369407 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
PHGDH-201ENST00000369407 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
PHGDH-201ENST00000369407 PLB1Q6P1J6 1458 aa16.04■□□□□ 0.16
PHGDH-201ENST00000369407 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
PHGDH-201ENST00000369407 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
PHGDH-201ENST00000369407 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-201ENST00000369407 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
PHGDH-201ENST00000369407 ARXQ96QS3 562 aa16.02■□□□□ 0.16
PHGDH-201ENST00000369407 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.15
PHGDH-201ENST00000369407 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
PHGDH-201ENST00000369407 TESK2Q96S53 571 aa16■□□□□ 0.15
PHGDH-201ENST00000369407 ADAMTS12P58397 1594 aa16■□□□□ 0.15
PHGDH-201ENST00000369407 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
PHGDH-201ENST00000369407 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
PHGDH-201ENST00000369407 RAPGEF6Q8TEU7 1601 aa15.99■□□□□ 0.15
PHGDH-201ENST00000369407 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
PHGDH-201ENST00000369407 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-201ENST00000369407 ADGRL2O95490 1459 aa15.99■□□□□ 0.15
PHGDH-201ENST00000369407 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
PHGDH-201ENST00000369407 E9PCH4 1651 aa15.98■□□□□ 0.15
PHGDH-201ENST00000369407 BCAR3O75815 825 aa15.98■□□□□ 0.15
PHGDH-201ENST00000369407 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-201ENST00000369407 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-201ENST00000369407 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-201ENST00000369407 POGKQ9P215 609 aa15.97■□□□□ 0.15
PHGDH-201ENST00000369407 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
PHGDH-201ENST00000369407 ADGBQ8N7X0 1667 aa15.97■□□□□ 0.15
PHGDH-201ENST00000369407 SEC24BO95487 1268 aa15.96■□□□□ 0.15
PHGDH-201ENST00000369407 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
PHGDH-201ENST00000369407 PRAG1Q86YV5 1406 aa15.96■□□□□ 0.15
PHGDH-201ENST00000369407 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
PHGDH-201ENST00000369407 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
PHGDH-201ENST00000369407 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
PHGDH-201ENST00000369407 IGHDP01880 384 aa15.95■□□□□ 0.14
PHGDH-201ENST00000369407 TMF1P82094 1093 aa15.95■□□□□ 0.14
PHGDH-201ENST00000369407 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
PHGDH-201ENST00000369407 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
PHGDH-201ENST00000369407 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
PHGDH-201ENST00000369407 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
PHGDH-201ENST00000369407 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-201ENST00000369407 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
PHGDH-201ENST00000369407 APAF1O14727 1248 aa15.91■□□□□ 0.14
PHGDH-201ENST00000369407 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
PHGDH-201ENST00000369407 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
PHGDH-201ENST00000369407 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
PHGDH-201ENST00000369407 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
PHGDH-201ENST00000369407 SPRYD3Q8NCJ5 442 aa15.91■□□□□ 0.14
PHGDH-201ENST00000369407 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
PHGDH-201ENST00000369407 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
PHGDH-201ENST00000369407 USP19O94966 1318 aa15.89■□□□□ 0.13
PHGDH-201ENST00000369407 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
PHGDH-201ENST00000369407 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-201ENST00000369407 GLIPR1L2Q4G1C9 344 aa15.89■□□□□ 0.13
PHGDH-201ENST00000369407 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
PHGDH-201ENST00000369407 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
PHGDH-201ENST00000369407 ZNF521Q96K83 1311 aa15.87■□□□□ 0.13
PHGDH-201ENST00000369407 A2MP01023 1474 aa15.87■□□□□ 0.13
PHGDH-201ENST00000369407 TRPM1Q7Z4N2 1603 aa15.86■□□□□ 0.13
PHGDH-201ENST00000369407 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
PHGDH-201ENST00000369407 MAGI2Q86UL8 1455 aa15.86■□□□□ 0.13
PHGDH-201ENST00000369407 FAM43AQ8N2R8 423 aa15.86■□□□□ 0.13
PHGDH-201ENST00000369407 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
PHGDH-201ENST00000369407 RRAGDQ9NQL2 400 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-201ENST00000369407 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-201ENST00000369407 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
PHGDH-201ENST00000369407 PLEKHH2Q8IVE3 1493 aa15.85■□□□□ 0.13
PHGDH-201ENST00000369407 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
PHGDH-201ENST00000369407 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
PHGDH-201ENST00000369407 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-201ENST00000369407 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms