RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
RTN4IP1-201ENST00000369063 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
RTN4IP1-201ENST00000369063 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
RTN4IP1-201ENST00000369063 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
RTN4IP1-201ENST00000369063 ZMYM3Q14202 1370 aa23.21■■□□□ 1.31
RTN4IP1-201ENST00000369063 WASHC2CQ9Y4E1 1318 aa23.21■■□□□ 1.31
RTN4IP1-201ENST00000369063 RNF17Q9BXT8 1623 aaKnown RBP23.21■■□□□ 1.31
RTN4IP1-201ENST00000369063 ANKRD50Q9ULJ7 1429 aa23.2■■□□□ 1.31
RTN4IP1-201ENST00000369063 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
RTN4IP1-201ENST00000369063 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
RTN4IP1-201ENST00000369063 MROH2AA6NES4 1674 aa23.18■■□□□ 1.3
RTN4IP1-201ENST00000369063 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
RTN4IP1-201ENST00000369063 C3P01024 1663 aa23.17■■□□□ 1.3
RTN4IP1-201ENST00000369063 MROH1Q8NDA8 1641 aa23.16■■□□□ 1.3
RTN4IP1-201ENST00000369063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
RTN4IP1-201ENST00000369063 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
RTN4IP1-201ENST00000369063 DEPDC5O75140 1603 aa23.13■■□□□ 1.29
RTN4IP1-201ENST00000369063 ABCC3O15438 1527 aa23.11■■□□□ 1.29
RTN4IP1-201ENST00000369063 NPATQ14207 1427 aa23.1■■□□□ 1.29
RTN4IP1-201ENST00000369063 KANK1Q14678 1352 aa23.09■■□□□ 1.29
RTN4IP1-201ENST00000369063 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
RTN4IP1-201ENST00000369063 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
RTN4IP1-201ENST00000369063 NAIPQ13075 1403 aa23.07■■□□□ 1.28
RTN4IP1-201ENST00000369063 PZPP20742 1482 aa23.06■■□□□ 1.28
RTN4IP1-201ENST00000369063 LMTK3Q96Q04 1460 aa23.06■■□□□ 1.28
RTN4IP1-201ENST00000369063 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
RTN4IP1-201ENST00000369063 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
RTN4IP1-201ENST00000369063 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
RTN4IP1-201ENST00000369063 CEP152O94986 1710 aa23.03■■□□□ 1.28
RTN4IP1-201ENST00000369063 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
RTN4IP1-201ENST00000369063 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
RTN4IP1-201ENST00000369063 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
RTN4IP1-201ENST00000369063 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
RTN4IP1-201ENST00000369063 CAMSAP1Q5T5Y3 1602 aa23.01■■□□□ 1.27
RTN4IP1-201ENST00000369063 UNC13BO14795 1591 aa23■■□□□ 1.27
RTN4IP1-201ENST00000369063 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
RTN4IP1-201ENST00000369063 NUP155O75694 1391 aa22.98■■□□□ 1.27
RTN4IP1-201ENST00000369063 HSPA2P54652 639 aa22.97■■□□□ 1.27
RTN4IP1-201ENST00000369063 TNRQ92752 1358 aa22.96■■□□□ 1.27
RTN4IP1-201ENST00000369063 SPATA31D1Q6ZQQ2 1576 aa22.94■■□□□ 1.26
RTN4IP1-201ENST00000369063 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
RTN4IP1-201ENST00000369063 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
RTN4IP1-201ENST00000369063 IQGAP3Q86VI3 1631 aa22.92■■□□□ 1.26
RTN4IP1-201ENST00000369063 MYO3AQ8NEV4 1616 aa22.92■■□□□ 1.26
RTN4IP1-201ENST00000369063 TET3O43151 1660 aa22.9■■□□□ 1.26
RTN4IP1-201ENST00000369063 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
RTN4IP1-201ENST00000369063 CFAP65Q6ZU64 1925 aaKnown RBP22.89■■□□□ 1.26
RTN4IP1-201ENST00000369063 NLRP1Q9C000 1473 aa22.88■■□□□ 1.25
RTN4IP1-201ENST00000369063 CEP170BQ9Y4F5 1589 aaPredicted RBP22.88■■□□□ 1.25
RTN4IP1-201ENST00000369063 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
RTN4IP1-201ENST00000369063 SETD5Q9C0A6 1442 aa22.87■■□□□ 1.25
RTN4IP1-201ENST00000369063 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
RTN4IP1-201ENST00000369063 ZNF142P52746 1687 aaPredicted RBP22.86■■□□□ 1.25
RTN4IP1-201ENST00000369063 NOS1P29475 1434 aa22.86■■□□□ 1.25
RTN4IP1-201ENST00000369063 E9PCH4 1651 aa22.82■■□□□ 1.24
RTN4IP1-201ENST00000369063 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
RTN4IP1-201ENST00000369063 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
RTN4IP1-201ENST00000369063 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
RTN4IP1-201ENST00000369063 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
RTN4IP1-201ENST00000369063 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
RTN4IP1-201ENST00000369063 IDI1Q13907 227 aa22.8■■□□□ 1.24
RTN4IP1-201ENST00000369063 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
RTN4IP1-201ENST00000369063 SYNMO15061 1565 aa22.79■■□□□ 1.24
RTN4IP1-201ENST00000369063 PLA2R1Q13018 1463 aa22.77■■□□□ 1.24
RTN4IP1-201ENST00000369063 PKD2Q13563 968 aa22.75■■□□□ 1.23
RTN4IP1-201ENST00000369063 STRCQ7RTU9 1775 aa22.75■■□□□ 1.23
RTN4IP1-201ENST00000369063 HRCP23327 699 aa22.74■■□□□ 1.23
RTN4IP1-201ENST00000369063 MPHOSPH9Q99550 1183 aa22.73■■□□□ 1.23
RTN4IP1-201ENST00000369063 DMRT2Q9Y5R5 561 aa22.73■■□□□ 1.23
RTN4IP1-201ENST00000369063 PTPRTO14522 1441 aa22.73■■□□□ 1.23
RTN4IP1-201ENST00000369063 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
RTN4IP1-201ENST00000369063 PIK3C2BO00750 1634 aa22.72■■□□□ 1.23
RTN4IP1-201ENST00000369063 UBR1Q8IWV7 1749 aa22.72■■□□□ 1.23
RTN4IP1-201ENST00000369063 NCKAP5LQ9HCH0 1330 aa22.71■■□□□ 1.23
RTN4IP1-201ENST00000369063 TRIM26Q12899 539 aaPredicted RBP22.7■■□□□ 1.22
RTN4IP1-201ENST00000369063 ANKLE2Q86XL3 938 aa22.69■■□□□ 1.22
RTN4IP1-201ENST00000369063 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
RTN4IP1-201ENST00000369063 SPHKAPQ2M3C7 1700 aa22.67■■□□□ 1.22
RTN4IP1-201ENST00000369063 FOXD1Q16676 465 aa22.66■■□□□ 1.22
RTN4IP1-201ENST00000369063 TMEM2Q9UHN6 1383 aa22.65■■□□□ 1.22
RTN4IP1-201ENST00000369063 ADGRB3O60242 1522 aa22.64■■□□□ 1.22
RTN4IP1-201ENST00000369063 SLIT1O75093 1534 aa22.64■■□□□ 1.22
RTN4IP1-201ENST00000369063 ARHGAP23Q9P227 1491 aa22.64■■□□□ 1.22
RTN4IP1-201ENST00000369063 TRPM2O94759 1503 aa22.63■■□□□ 1.21
RTN4IP1-201ENST00000369063 TMEM131LA2VDJ0 1609 aa22.62■■□□□ 1.21
RTN4IP1-201ENST00000369063 LTKP29376 864 aa22.62■■□□□ 1.21
RTN4IP1-201ENST00000369063 TXNDC2Q86VQ3 553 aa22.62■■□□□ 1.21
RTN4IP1-201ENST00000369063 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
RTN4IP1-201ENST00000369063 EID1Q9Y6B2 187 aa22.61■■□□□ 1.21
RTN4IP1-201ENST00000369063 NEURL4Q96JN8 1562 aa22.6■■□□□ 1.21
RTN4IP1-201ENST00000369063 MED14O60244 1454 aa22.6■■□□□ 1.21
RTN4IP1-201ENST00000369063 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
RTN4IP1-201ENST00000369063 SCAF11Q99590 1463 aaKnown RBP22.59■■□□□ 1.21
RTN4IP1-201ENST00000369063 CLTCL1P53675 1640 aa22.56■■□□□ 1.2
RTN4IP1-201ENST00000369063 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
RTN4IP1-201ENST00000369063 HDGFP51858 240 aaKnown RBP22.55■■□□□ 1.2
RTN4IP1-201ENST00000369063 MYO5BQ9ULV0 1848 aa22.55■■□□□ 1.2
RTN4IP1-201ENST00000369063 ZFYVE9O95405 1425 aa22.54■■□□□ 1.2
RTN4IP1-201ENST00000369063 CCDC144AA2RUR9 1427 aa22.53■■□□□ 1.2
RTN4IP1-201ENST00000369063 RIMS2Q9UQ26 1411 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms