RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
ECM1-202ENST00000369047 FOXD1Q16676 465 aa18.5■□□□□ 0.55
ECM1-202ENST00000369047 MBD5Q9P267 1494 aa18.49■□□□□ 0.55
ECM1-202ENST00000369047 ARHGEF40Q8TER5 1519 aa18.49■□□□□ 0.55
ECM1-202ENST00000369047 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
ECM1-202ENST00000369047 AFAP1Q8N556 730 aa18.47■□□□□ 0.55
ECM1-202ENST00000369047 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
ECM1-202ENST00000369047 RTEL1-TNFRSF6BF6WH68 1400 aa18.46■□□□□ 0.55
ECM1-202ENST00000369047 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
ECM1-202ENST00000369047 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
ECM1-202ENST00000369047 INO80Q9ULG1 1556 aaPredicted RBP18.45■□□□□ 0.54
ECM1-202ENST00000369047 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
ECM1-202ENST00000369047 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
ECM1-202ENST00000369047 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
ECM1-202ENST00000369047 ATP10AO60312 1499 aa18.42■□□□□ 0.54
ECM1-202ENST00000369047 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
ECM1-202ENST00000369047 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
ECM1-202ENST00000369047 PKD2Q13563 968 aa18.41■□□□□ 0.54
ECM1-202ENST00000369047 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
ECM1-202ENST00000369047 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
ECM1-202ENST00000369047 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
ECM1-202ENST00000369047 NUP155O75694 1391 aa18.39■□□□□ 0.53
ECM1-202ENST00000369047 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
ECM1-202ENST00000369047 NBPF8Q3BBV2 869 aa18.38■□□□□ 0.53
ECM1-202ENST00000369047 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
ECM1-202ENST00000369047 PLXNC1O60486 1568 aa18.36■□□□□ 0.53
ECM1-202ENST00000369047 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
ECM1-202ENST00000369047 AGLP35573 1532 aa18.33■□□□□ 0.53
ECM1-202ENST00000369047 A2MP01023 1474 aa18.33■□□□□ 0.52
ECM1-202ENST00000369047 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
ECM1-202ENST00000369047 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
ECM1-202ENST00000369047 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
ECM1-202ENST00000369047 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
ECM1-202ENST00000369047 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
ECM1-202ENST00000369047 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
ECM1-202ENST00000369047 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
ECM1-202ENST00000369047 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.52
ECM1-202ENST00000369047 FAM135AQ9P2D6 1515 aa18.27■□□□□ 0.51
ECM1-202ENST00000369047 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.51
ECM1-202ENST00000369047 UNC13BO14795 1591 aa18.26■□□□□ 0.51
ECM1-202ENST00000369047 ERBINQ96RT1 1412 aa18.25■□□□□ 0.51
ECM1-202ENST00000369047 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
ECM1-202ENST00000369047 SIGLEC1Q9BZZ2 1709 aa18.22■□□□□ 0.51
ECM1-202ENST00000369047 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
ECM1-202ENST00000369047 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
ECM1-202ENST00000369047 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
ECM1-202ENST00000369047 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
ECM1-202ENST00000369047 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
ECM1-202ENST00000369047 USP47Q96K76 1375 aa18.2■□□□□ 0.5
ECM1-202ENST00000369047 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
ECM1-202ENST00000369047 ESF1Q9H501 851 aaKnown RBP18.18■□□□□ 0.5
ECM1-202ENST00000369047 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
ECM1-202ENST00000369047 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
ECM1-202ENST00000369047 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
ECM1-202ENST00000369047 KIF3BO15066 747 aa18.17■□□□□ 0.5
ECM1-202ENST00000369047 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
ECM1-202ENST00000369047 MLECQ14165 292 aa18.16■□□□□ 0.5
ECM1-202ENST00000369047 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
ECM1-202ENST00000369047 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
ECM1-202ENST00000369047 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
ECM1-202ENST00000369047 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
ECM1-202ENST00000369047 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
ECM1-202ENST00000369047 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
ECM1-202ENST00000369047 GGT6Q6P531 493 aa18.13■□□□□ 0.49
ECM1-202ENST00000369047 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
ECM1-202ENST00000369047 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
ECM1-202ENST00000369047 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
ECM1-202ENST00000369047 KANK1Q14678 1352 aa18.12■□□□□ 0.49
ECM1-202ENST00000369047 KDM4FA0A1W2PPD8 638 aa18.11■□□□□ 0.49
ECM1-202ENST00000369047 PRDM15P57071 1507 aaPredicted RBP18.1■□□□□ 0.49
ECM1-202ENST00000369047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
ECM1-202ENST00000369047 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
ECM1-202ENST00000369047 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
ECM1-202ENST00000369047 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
ECM1-202ENST00000369047 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
ECM1-202ENST00000369047 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
ECM1-202ENST00000369047 MROH1Q8NDA8 1641 aa18.07■□□□□ 0.48
ECM1-202ENST00000369047 PTPRMP28827 1452 aa18.07■□□□□ 0.48
ECM1-202ENST00000369047 NEFLP07196 543 aa18.07■□□□□ 0.48
ECM1-202ENST00000369047 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
ECM1-202ENST00000369047 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
ECM1-202ENST00000369047 LAMC1P11047 1609 aa18.04■□□□□ 0.48
ECM1-202ENST00000369047 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
ECM1-202ENST00000369047 ABCC3O15438 1527 aa18.04■□□□□ 0.48
ECM1-202ENST00000369047 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
ECM1-202ENST00000369047 LMTK2Q8IWU2 1503 aa18.03■□□□□ 0.48
ECM1-202ENST00000369047 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
ECM1-202ENST00000369047 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
ECM1-202ENST00000369047 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
ECM1-202ENST00000369047 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
ECM1-202ENST00000369047 CEP152O94986 1710 aa18.01■□□□□ 0.47
ECM1-202ENST00000369047 C3P01024 1663 aa18.01■□□□□ 0.47
ECM1-202ENST00000369047 FKBP8Q14318 412 aa18.01■□□□□ 0.47
ECM1-202ENST00000369047 ZMYM3Q14202 1370 aa18■□□□□ 0.47
ECM1-202ENST00000369047 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
ECM1-202ENST00000369047 CCDC184Q52MB2 194 aa18■□□□□ 0.47
ECM1-202ENST00000369047 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
ECM1-202ENST00000369047 RGL3Q3MIN7 710 aa18■□□□□ 0.47
ECM1-202ENST00000369047 NPATQ14207 1427 aa17.98■□□□□ 0.47
ECM1-202ENST00000369047 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms