RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PLIN1O60240 522 aa22.64■■□□□ 1.22
SNX27-202ENST00000368841 CALD1Q05682 793 aaKnown RBP22.64■■□□□ 1.22
SNX27-202ENST00000368841 FBXW7Q969H0 707 aa22.64■■□□□ 1.21
SNX27-202ENST00000368841 PMFBP1Q8TBY8 1022 aa22.64■■□□□ 1.21
SNX27-202ENST00000368841 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
SNX27-202ENST00000368841 SYAP1Q96A49 352 aaPredicted RBP22.62■■□□□ 1.21
SNX27-202ENST00000368841 PATL2C9JE40 543 aaKnown RBP22.62■■□□□ 1.21
SNX27-202ENST00000368841 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
SNX27-202ENST00000368841 CFAP44Q96MT7 982 aa22.61■■□□□ 1.21
SNX27-202ENST00000368841 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
SNX27-202ENST00000368841 BCL11BQ9C0K0 894 aaPredicted RBP22.6■■□□□ 1.21
SNX27-202ENST00000368841 SF3A1Q15459 793 aaKnown RBP22.59■■□□□ 1.21
SNX27-202ENST00000368841 TNNT3P45378 269 aaPredicted RBP22.59■■□□□ 1.21
SNX27-202ENST00000368841 FOSBP53539 338 aa22.59■■□□□ 1.21
SNX27-202ENST00000368841 CCAR2Q8N163 923 aaKnown RBP22.59■■□□□ 1.21
SNX27-202ENST00000368841 SAMD1Q6SPF0 538 aaPredicted RBP22.58■■□□□ 1.21
SNX27-202ENST00000368841 H3BQV1 296 aa22.58■■□□□ 1.21
SNX27-202ENST00000368841 CCER2I3L3R5 266 aa22.58■■□□□ 1.21
SNX27-202ENST00000368841 IFFO2Q5TF58 517 aa22.58■■□□□ 1.21
SNX27-202ENST00000368841 TPD52L1Q16890 204 aaPredicted RBP22.58■■□□□ 1.21
SNX27-202ENST00000368841 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.2
SNX27-202ENST00000368841 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
SNX27-202ENST00000368841 KLHL34Q8N239 644 aa22.57■■□□□ 1.2
SNX27-202ENST00000368841 GOLGA6L1Q8N7Z2 621 aa22.57■■□□□ 1.2
SNX27-202ENST00000368841 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
SNX27-202ENST00000368841 EVA1CP58658 441 aa22.56■■□□□ 1.2
SNX27-202ENST00000368841 EIF2S2P20042 333 aaKnown RBP22.56■■□□□ 1.2
SNX27-202ENST00000368841 SYTL4Q96C24 671 aaPredicted RBP22.55■■□□□ 1.2
SNX27-202ENST00000368841 HMMRO75330 724 aa22.55■■□□□ 1.2
SNX27-202ENST00000368841 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
SNX27-202ENST00000368841 EID1Q9Y6B2 187 aa22.55■■□□□ 1.2
SNX27-202ENST00000368841 ANKRD45Q5TZF3 282 aa22.54■■□□□ 1.2
SNX27-202ENST00000368841 MCTP1Q6DN14 999 aa22.54■■□□□ 1.2
SNX27-202ENST00000368841 RALBP1Q15311 655 aa22.54■■□□□ 1.2
SNX27-202ENST00000368841 CEP89Q96ST8 783 aa22.54■■□□□ 1.2
SNX27-202ENST00000368841 WASHC2CQ9Y4E1 1318 aa22.53■■□□□ 1.2
SNX27-202ENST00000368841 TERF2IPQ9NYB0 399 aa22.52■■□□□ 1.2
SNX27-202ENST00000368841 KDM4AO75164 1064 aa22.52■■□□□ 1.2
SNX27-202ENST00000368841 EIF3AQ14152 1382 aaKnown RBP22.52■■□□□ 1.2
SNX27-202ENST00000368841 PTMSP20962 102 aa22.51■■□□□ 1.19
SNX27-202ENST00000368841 TPM3P06753 285 aa22.49■■□□□ 1.19
SNX27-202ENST00000368841 FAM184AQ8NB25 1140 aa22.49■■□□□ 1.19
SNX27-202ENST00000368841 ZNF592Q92610 1267 aa22.48■■□□□ 1.19
SNX27-202ENST00000368841 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
SNX27-202ENST00000368841 CSPP1Q1MSJ5 1256 aa22.46■■□□□ 1.19
SNX27-202ENST00000368841 ST18O60284 1047 aa22.46■■□□□ 1.19
SNX27-202ENST00000368841 IPO9Q96P70 1041 aaKnown RBP22.46■■□□□ 1.19
SNX27-202ENST00000368841 PCMTD1Q96MG8 357 aaPredicted RBP22.45■■□□□ 1.18
SNX27-202ENST00000368841 TCEAL9Q9UHQ7 104 aa22.45■■□□□ 1.18
SNX27-202ENST00000368841 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
SNX27-202ENST00000368841 MEX3CQ5U5Q3 659 aaKnown RBP22.44■■□□□ 1.18
SNX27-202ENST00000368841 TRIM34Q9BYJ4 488 aa22.44■■□□□ 1.18
SNX27-202ENST00000368841 APPP05067 770 aa22.43■■□□□ 1.18
SNX27-202ENST00000368841 PANK3Q9H999 370 aa22.43■■□□□ 1.18
SNX27-202ENST00000368841 TSHZ2Q9NRE2 1034 aa22.43■■□□□ 1.18
SNX27-202ENST00000368841 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
SNX27-202ENST00000368841 CCDC34Q96HJ3 373 aa22.43■■□□□ 1.18
SNX27-202ENST00000368841 DHX16O60231 1041 aaKnown RBP22.42■■□□□ 1.18
SNX27-202ENST00000368841 AKAP17AQ02040 695 aaKnown RBP22.42■■□□□ 1.18
SNX27-202ENST00000368841 ANKRD30AQ9BXX3 1397 aa22.41■■□□□ 1.18
SNX27-202ENST00000368841 MINK1Q8N4C8 1332 aaPredicted RBP22.41■■□□□ 1.18
SNX27-202ENST00000368841 FYB1O15117 783 aa22.41■■□□□ 1.18
SNX27-202ENST00000368841 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
SNX27-202ENST00000368841 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
SNX27-202ENST00000368841 CRBNQ96SW2 442 aa22.4■■□□□ 1.18
SNX27-202ENST00000368841 CTDP1Q9Y5B0 961 aaPredicted RBP22.4■■□□□ 1.18
SNX27-202ENST00000368841 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
SNX27-202ENST00000368841 ZNF428Q96B54 188 aa22.39■■□□□ 1.18
SNX27-202ENST00000368841 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.17
SNX27-202ENST00000368841 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
SNX27-202ENST00000368841 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
SNX27-202ENST00000368841 EXOC6Q8TAG9 804 aa22.37■■□□□ 1.17
SNX27-202ENST00000368841 GOLGA6L19H0YKK7 550 aa22.36■■□□□ 1.17
SNX27-202ENST00000368841 PHF14O94880 888 aa22.36■■□□□ 1.17
SNX27-202ENST00000368841 CNKSR2Q8WXI2 1034 aa22.36■■□□□ 1.17
SNX27-202ENST00000368841 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
SNX27-202ENST00000368841 DDX49Q9Y6V7 483 aaKnown RBP22.35■■□□□ 1.17
SNX27-202ENST00000368841 COG3Q96JB2 828 aa22.35■■□□□ 1.17
SNX27-202ENST00000368841 NUTM2GQ5VZR2 741 aa22.35■■□□□ 1.17
SNX27-202ENST00000368841 VPS37DQ86XT2 251 aa22.35■■□□□ 1.17
SNX27-202ENST00000368841 C9orf78Q9NZ63 289 aaPredicted RBP22.34■■□□□ 1.17
SNX27-202ENST00000368841 TSR1Q2NL82 804 aaKnown RBP22.34■■□□□ 1.17
SNX27-202ENST00000368841 TTC5Q8N0Z6 440 aa22.34■■□□□ 1.17
SNX27-202ENST00000368841 DIAPH3Q9NSV4 1193 aa22.34■■□□□ 1.17
SNX27-202ENST00000368841 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.17
SNX27-202ENST00000368841 ST20-MTHFSA0A0A6YYL1 179 aa22.33■■□□□ 1.16
SNX27-202ENST00000368841 KRI1Q8N9T8 703 aaKnown RBP22.33■■□□□ 1.16
SNX27-202ENST00000368841 BECN2A8MW95 431 aa22.32■■□□□ 1.16
SNX27-202ENST00000368841 SYNE3Q6ZMZ3 975 aa22.32■■□□□ 1.16
SNX27-202ENST00000368841 NOL10Q9BSC4 688 aaKnown RBP22.32■■□□□ 1.16
SNX27-202ENST00000368841 TEFQ10587 303 aa22.31■■□□□ 1.16
SNX27-202ENST00000368841 NFXL1Q6ZNB6 911 aa22.3■■□□□ 1.16
SNX27-202ENST00000368841 TPM2P07951 284 aa22.3■■□□□ 1.16
SNX27-202ENST00000368841 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
SNX27-202ENST00000368841 CWC22Q9HCG8 908 aaKnown RBP22.29■■□□□ 1.16
SNX27-202ENST00000368841 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
SNX27-202ENST00000368841 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.16
SNX27-202ENST00000368841 FAM177BA6PVY3 158 aa22.27■■□□□ 1.16
SNX27-202ENST00000368841 TRIM29Q14134 588 aa22.27■■□□□ 1.16
SNX27-202ENST00000368841 NLRP13Q86W25 1043 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms