RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TIMELESSQ9UNS1 1208 aa14.96□□□□□ -0.01
TPM3-212ENST00000368533 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.02
TPM3-212ENST00000368533 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.02
TPM3-212ENST00000368533 FAM135AQ9P2D6 1515 aa14.95□□□□□ -0.02
TPM3-212ENST00000368533 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
TPM3-212ENST00000368533 RPRD2Q5VT52 1461 aaKnown RBP14.95□□□□□ -0.02
TPM3-212ENST00000368533 ZFYVE16Q7Z3T8 1539 aa14.93□□□□□ -0.02
TPM3-212ENST00000368533 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
TPM3-212ENST00000368533 ATP7AQ04656 1500 aa14.93□□□□□ -0.02
TPM3-212ENST00000368533 DUOX2Q9NRD8 1548 aa14.92□□□□□ -0.02
TPM3-212ENST00000368533 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
TPM3-212ENST00000368533 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
TPM3-212ENST00000368533 TEX14Q8IWB6 1497 aa14.89□□□□□ -0.03
TPM3-212ENST00000368533 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
TPM3-212ENST00000368533 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
TPM3-212ENST00000368533 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
TPM3-212ENST00000368533 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
TPM3-212ENST00000368533 MLECQ14165 292 aa14.88□□□□□ -0.03
TPM3-212ENST00000368533 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
TPM3-212ENST00000368533 ERBINQ96RT1 1412 aa14.87□□□□□ -0.03
TPM3-212ENST00000368533 POGZQ7Z3K3 1410 aa14.86□□□□□ -0.03
TPM3-212ENST00000368533 EIF4G2P78344 907 aaKnown RBP eCLIP14.86□□□□□ -0.03
TPM3-212ENST00000368533 PLA2R1Q13018 1463 aa14.85□□□□□ -0.03
TPM3-212ENST00000368533 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
TPM3-212ENST00000368533 DHX29Q7Z478 1369 aaKnown RBP14.85□□□□□ -0.03
TPM3-212ENST00000368533 C11orf95C9JLR9 678 aaPredicted RBP14.85□□□□□ -0.03
TPM3-212ENST00000368533 RTEL1-TNFRSF6BF6WH68 1400 aa14.85□□□□□ -0.03
TPM3-212ENST00000368533 YEATS2Q9ULM3 1422 aa14.85□□□□□ -0.03
TPM3-212ENST00000368533 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
TPM3-212ENST00000368533 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
TPM3-212ENST00000368533 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
TPM3-212ENST00000368533 UNC13BO14795 1591 aa14.82□□□□□ -0.04
TPM3-212ENST00000368533 WASHC2CQ9Y4E1 1318 aa14.82□□□□□ -0.04
TPM3-212ENST00000368533 A2MP01023 1474 aa14.82□□□□□ -0.04
TPM3-212ENST00000368533 KANK1Q14678 1352 aa14.82□□□□□ -0.04
TPM3-212ENST00000368533 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
TPM3-212ENST00000368533 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
TPM3-212ENST00000368533 NUTM2DQ5VT03 806 aaPredicted RBP14.81□□□□□ -0.04
TPM3-212ENST00000368533 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
TPM3-212ENST00000368533 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
TPM3-212ENST00000368533 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
TPM3-212ENST00000368533 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
TPM3-212ENST00000368533 IQGAP3Q86VI3 1631 aa14.79□□□□□ -0.04
TPM3-212ENST00000368533 MAP3K4Q9Y6R4 1608 aa14.78□□□□□ -0.04
TPM3-212ENST00000368533 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
TPM3-212ENST00000368533 NEO1Q92859 1461 aa14.77□□□□□ -0.04
TPM3-212ENST00000368533 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.05
TPM3-212ENST00000368533 E9PCH4 1651 aa14.76□□□□□ -0.05
TPM3-212ENST00000368533 CFAP74Q9C0B2 1584 aa14.75□□□□□ -0.05
TPM3-212ENST00000368533 FRMPD1Q5SYB0 1578 aa14.75□□□□□ -0.05
TPM3-212ENST00000368533 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
TPM3-212ENST00000368533 USP47Q96K76 1375 aa14.75□□□□□ -0.05
TPM3-212ENST00000368533 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
TPM3-212ENST00000368533 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
TPM3-212ENST00000368533 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
TPM3-212ENST00000368533 ATP10AO60312 1499 aa14.74□□□□□ -0.05
TPM3-212ENST00000368533 KDM5CP41229 1560 aa14.74□□□□□ -0.05
TPM3-212ENST00000368533 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
TPM3-212ENST00000368533 ANP32CO43423 234 aa14.74□□□□□ -0.05
TPM3-212ENST00000368533 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
TPM3-212ENST00000368533 CEP152O94986 1710 aa14.73□□□□□ -0.05
TPM3-212ENST00000368533 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
TPM3-212ENST00000368533 MROH1Q8NDA8 1641 aa14.72□□□□□ -0.05
TPM3-212ENST00000368533 FKBP8Q14318 412 aa14.71□□□□□ -0.05
TPM3-212ENST00000368533 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
TPM3-212ENST00000368533 RICTORQ6R327 1708 aa14.71□□□□□ -0.06
TPM3-212ENST00000368533 DIP2CQ9Y2E4 1556 aa14.7□□□□□ -0.06
TPM3-212ENST00000368533 KIF7Q2M1P5 1343 aa14.7□□□□□ -0.06
TPM3-212ENST00000368533 MSH5O43196 834 aa14.7□□□□□ -0.06
TPM3-212ENST00000368533 PPRC1Q5VV67 1664 aaKnown RBP14.69□□□□□ -0.06
TPM3-212ENST00000368533 PRDM15P57071 1507 aaPredicted RBP14.69□□□□□ -0.06
TPM3-212ENST00000368533 GLI2P10070 1586 aa14.69□□□□□ -0.06
TPM3-212ENST00000368533 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
TPM3-212ENST00000368533 NPATQ14207 1427 aa14.68□□□□□ -0.06
TPM3-212ENST00000368533 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
TPM3-212ENST00000368533 CLTCL1P53675 1640 aa14.68□□□□□ -0.06
TPM3-212ENST00000368533 PRAG1Q86YV5 1406 aa14.66□□□□□ -0.06
TPM3-212ENST00000368533 CCDC7Q96M83 1385 aa14.66□□□□□ -0.06
TPM3-212ENST00000368533 ADGRF5Q8IZF2 1346 aa14.66□□□□□ -0.06
TPM3-212ENST00000368533 TET3O43151 1660 aa14.66□□□□□ -0.06
TPM3-212ENST00000368533 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
TPM3-212ENST00000368533 SPHKAPQ2M3C7 1700 aa14.65□□□□□ -0.06
TPM3-212ENST00000368533 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
TPM3-212ENST00000368533 ANO8Q9HCE9 1232 aaPredicted RBP14.65□□□□□ -0.06
TPM3-212ENST00000368533 SPATA31E1Q6ZUB1 1445 aa14.65□□□□□ -0.06
TPM3-212ENST00000368533 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
TPM3-212ENST00000368533 EFCAB6Q5THR3 1501 aa14.63□□□□□ -0.07
TPM3-212ENST00000368533 VWDEQ8N2E2 1590 aa14.63□□□□□ -0.07
TPM3-212ENST00000368533 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
TPM3-212ENST00000368533 TRPM2O94759 1503 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 UHRF1BP1Q6BDS2 1440 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 NEFLP07196 543 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 IDI1Q13907 227 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 BCORL1Q5H9F3 1711 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 ABCC3O15438 1527 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 PTPRTO14522 1441 aa14.62□□□□□ -0.07
TPM3-212ENST00000368533 CCDC184Q52MB2 194 aa14.6□□□□□ -0.07
TPM3-212ENST00000368533 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
TPM3-212ENST00000368533 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms