RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NCOA1Q15788 1441 aa34.48■■■■□ 3.11
ECHDC1-203ENST00000368291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.48■■■■□ 3.11
ECHDC1-203ENST00000368291 PPP6R1Q9UPN7 881 aa34.47■■■■□ 3.11
ECHDC1-203ENST00000368291 ANKRD30AQ9BXX3 1397 aa34.46■■■■□ 3.11
ECHDC1-203ENST00000368291 RRBP1Q9P2E9 1410 aaKnown RBP34.46■■■■□ 3.11
ECHDC1-203ENST00000368291 SETD1BQ9UPS6 1966 aaKnown RBP34.43■■■■□ 3.1
ECHDC1-203ENST00000368291 MROH1Q8NDA8 1641 aa34.43■■■■□ 3.1
ECHDC1-203ENST00000368291 ERBINQ96RT1 1412 aa34.42■■■■□ 3.1
ECHDC1-203ENST00000368291 ZMYM3Q14202 1370 aa34.42■■■■□ 3.1
ECHDC1-203ENST00000368291 FAM135AQ9P2D6 1515 aa34.4■■■■□ 3.1
ECHDC1-203ENST00000368291 LMTK3Q96Q04 1460 aa34.39■■■■□ 3.1
ECHDC1-203ENST00000368291 KDM5DQ9BY66 1539 aa34.38■■■■□ 3.09
ECHDC1-203ENST00000368291 PREX1Q8TCU6 1659 aa34.37■■■■□ 3.09
ECHDC1-203ENST00000368291 DEPDC5O75140 1603 aa34.34■■■■□ 3.09
ECHDC1-203ENST00000368291 ZC3H13Q5T200 1668 aaKnown RBP34.32■■■■□ 3.08
ECHDC1-203ENST00000368291 CEP152O94986 1710 aa34.31■■■■□ 3.08
ECHDC1-203ENST00000368291 PRDM15P57071 1507 aaPredicted RBP34.31■■■■□ 3.08
ECHDC1-203ENST00000368291 WASHC2CQ9Y4E1 1318 aa34.3■■■■□ 3.08
ECHDC1-203ENST00000368291 ROCK1Q13464 1354 aa34.3■■■■□ 3.08
ECHDC1-203ENST00000368291 ABCC3O15438 1527 aa34.3■■■■□ 3.08
ECHDC1-203ENST00000368291 ITGAEP38570 1179 aa34.29■■■■□ 3.08
ECHDC1-203ENST00000368291 NPATQ14207 1427 aa34.29■■■■□ 3.08
ECHDC1-203ENST00000368291 ANKRD50Q9ULJ7 1429 aa34.25■■■■□ 3.07
ECHDC1-203ENST00000368291 PZPP20742 1482 aa34.22■■■■□ 3.07
ECHDC1-203ENST00000368291 CAMSAP1Q5T5Y3 1602 aa34.21■■■■□ 3.07
ECHDC1-203ENST00000368291 UHRF1BP1Q6BDS2 1440 aa34.21■■■■□ 3.07
ECHDC1-203ENST00000368291 VWDEQ8N2E2 1590 aa34.2■■■■□ 3.07
ECHDC1-203ENST00000368291 HSPA2P54652 639 aa34.18■■■■□ 3.06
ECHDC1-203ENST00000368291 CFAP65Q6ZU64 1925 aaKnown RBP34.17■■■■□ 3.06
ECHDC1-203ENST00000368291 FBXO31Q5XUX0 539 aaPredicted RBP34.16■■■■□ 3.06
ECHDC1-203ENST00000368291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.062e-7■■■□□ 17
ECHDC1-203ENST00000368291 MYO3AQ8NEV4 1616 aa34.16■■■■□ 3.06
ECHDC1-203ENST00000368291 ZNF142P52746 1687 aaPredicted RBP34.12■■■■□ 3.05
ECHDC1-203ENST00000368291 UNC13BO14795 1591 aa34.12■■■■□ 3.05
ECHDC1-203ENST00000368291 LMTK2Q8IWU2 1503 aa34.1■■■■□ 3.05
ECHDC1-203ENST00000368291 KANK1Q14678 1352 aa34.1■■■■□ 3.05
ECHDC1-203ENST00000368291 SPATA31D1Q6ZQQ2 1576 aa34.07■■■■□ 3.04
ECHDC1-203ENST00000368291 ARHGAP31Q2M1Z3 1444 aa34.07■■■■□ 3.04
ECHDC1-203ENST00000368291 GCC2Q8IWJ2 1684 aa34.06■■■■□ 3.04
ECHDC1-203ENST00000368291 TNRQ92752 1358 aa34.06■■■■□ 3.04
ECHDC1-203ENST00000368291 CEP170BQ9Y4F5 1589 aaPredicted RBP34.06■■■■□ 3.04
ECHDC1-203ENST00000368291 ERVK-7P63135 1459 aa34.04■■■■□ 3.04
ECHDC1-203ENST00000368291 STRCQ7RTU9 1775 aa34.03■■■■□ 3.04
ECHDC1-203ENST00000368291 NAIPQ13075 1403 aa34.02■■■■□ 3.04
ECHDC1-203ENST00000368291 EFCAB6Q5THR3 1501 aa34■■■■□ 3.03
ECHDC1-203ENST00000368291 TET3O43151 1660 aa33.99■■■■□ 3.03
ECHDC1-203ENST00000368291 A2ML1A8K2U0 1454 aa33.99■■■■□ 3.03
ECHDC1-203ENST00000368291 IQGAP3Q86VI3 1631 aa33.98■■■■□ 3.03
ECHDC1-203ENST00000368291 HFM1A2PYH4 1435 aa33.97■■■■□ 3.03
ECHDC1-203ENST00000368291 NLRP1Q9C000 1473 aa33.94■■■■□ 3.02
ECHDC1-203ENST00000368291 E9PCH4 1651 aa33.89■■■■□ 3.02
ECHDC1-203ENST00000368291 NUP155O75694 1391 aa33.89■■■■□ 3.02
ECHDC1-203ENST00000368291 RPRD2Q5VT52 1461 aaKnown RBP33.87■■■■□ 3.01
ECHDC1-203ENST00000368291 SYNMO15061 1565 aa33.86■■■■□ 3.01
ECHDC1-203ENST00000368291 NOS1P29475 1434 aa33.86■■■■□ 3.01
ECHDC1-203ENST00000368291 PLA2R1Q13018 1463 aa33.85■■■■□ 3.01
ECHDC1-203ENST00000368291 UGGT1Q9NYU2 1555 aa33.85■■■■□ 3.01
ECHDC1-203ENST00000368291 UBR1Q8IWV7 1749 aa33.82■■■■□ 3.01
ECHDC1-203ENST00000368291 PIK3C2BO00750 1634 aa33.79■■■■□ 3
ECHDC1-203ENST00000368291 NCKAP5LQ9HCH0 1330 aa33.76■■■□□ 2.99
ECHDC1-203ENST00000368291 POLR1AO95602 1720 aaPredicted RBP33.75■■■□□ 2.99
ECHDC1-203ENST00000368291 THEMISQ8N1K5 641 aaPredicted RBP33.74■■■□□ 2.99
ECHDC1-203ENST00000368291 PTPRTO14522 1441 aa33.73■■■□□ 2.99
ECHDC1-203ENST00000368291 IDI1Q13907 227 aa33.72■■■□□ 2.99
ECHDC1-203ENST00000368291 KDM5AP29375 1690 aaKnown RBP33.72■■■□□ 2.99
ECHDC1-203ENST00000368291 DMRT2Q9Y5R5 561 aa33.72■■■□□ 2.99
ECHDC1-203ENST00000368291 PKD2Q13563 968 aa33.7■■■□□ 2.98
ECHDC1-203ENST00000368291 NEURL4Q96JN8 1562 aa33.69■■■□□ 2.98
ECHDC1-203ENST00000368291 SPHKAPQ2M3C7 1700 aa33.67■■■□□ 2.98
ECHDC1-203ENST00000368291 MYO5BQ9ULV0 1848 aa33.66■■■□□ 2.98
ECHDC1-203ENST00000368291 TRIM52Q96A61 297 aa33.65■■■□□ 2.98
ECHDC1-203ENST00000368291 SLC52A1Q9NWF4 448 aa33.65■■■□□ 2.98
ECHDC1-203ENST00000368291 SETD5Q9C0A6 1442 aa33.63■■■□□ 2.97
ECHDC1-203ENST00000368291 ARHGAP23Q9P227 1491 aa33.63■■■□□ 2.97
ECHDC1-203ENST00000368291 ADGRB3O60242 1522 aa33.62■■■□□ 2.97
ECHDC1-203ENST00000368291 SLIT1O75093 1534 aa33.62■■■□□ 2.97
ECHDC1-203ENST00000368291 ANKLE2Q86XL3 938 aa33.6■■■□□ 2.97
ECHDC1-203ENST00000368291 TMEM131LA2VDJ0 1609 aa33.58■■■□□ 2.97
ECHDC1-203ENST00000368291 MED14O60244 1454 aa33.58■■■□□ 2.97
ECHDC1-203ENST00000368291 STAG3Q9UJ98 1225 aa33.56■■■□□ 2.96
ECHDC1-203ENST00000368291 TMEM2Q9UHN6 1383 aa33.54■■■□□ 2.96
ECHDC1-203ENST00000368291 SLC4A1APQ9BWU0 796 aaKnown RBP33.54■■■□□ 2.96
ECHDC1-203ENST00000368291 IQGAP1P46940 1657 aa33.53■■■□□ 2.96
ECHDC1-203ENST00000368291 RAB3GAP2Q9H2M9 1393 aa33.53■■■□□ 2.96
ECHDC1-203ENST00000368291 LTKP29376 864 aa33.53■■■□□ 2.96
ECHDC1-203ENST00000368291 SCAF11Q99590 1463 aaKnown RBP33.52■■■□□ 2.96
ECHDC1-203ENST00000368291 NPHP4O75161 1426 aaPredicted RBP33.51■■■□□ 2.95
ECHDC1-203ENST00000368291 TRPM2O94759 1503 aa33.5■■■□□ 2.95
ECHDC1-203ENST00000368291 CLTCL1P53675 1640 aa33.49■■■□□ 2.95
ECHDC1-203ENST00000368291 LTBP4Q8N2S1 1624 aa33.47■■■□□ 2.95
ECHDC1-203ENST00000368291 TXNDC2Q86VQ3 553 aa33.47■■■□□ 2.95
ECHDC1-203ENST00000368291 MPHOSPH9Q99550 1183 aa33.45■■■□□ 2.94
ECHDC1-203ENST00000368291 ZFYVE9O95405 1425 aa33.44■■■□□ 2.94
ECHDC1-203ENST00000368291 ACIN1Q9UKV3 1341 aaKnown RBP33.43■■■□□ 2.94
ECHDC1-203ENST00000368291 FOXD1Q16676 465 aa33.42■■■□□ 2.94
ECHDC1-203ENST00000368291 EID1Q9Y6B2 187 aa33.42■■■□□ 2.94
ECHDC1-203ENST00000368291 ZNF335Q9H4Z2 1342 aaPredicted RBP33.42■■■□□ 2.94
ECHDC1-203ENST00000368291 KIF1BO60333 1816 aa33.41■■■□□ 2.94
ECHDC1-203ENST00000368291 CHGAP10645 457 aaKnown RBP33.4■■■□□ 2.94
ECHDC1-203ENST00000368291 RIMS2Q9UQ26 1411 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms