RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
PTPRK-204ENST00000368210 HSP90AB1P08238 724 aaKnown RBP16.79■□□□□ 0.28
PTPRK-204ENST00000368210 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
PTPRK-204ENST00000368210 RWDD1Q9H446 243 aaPredicted RBP16.78■□□□□ 0.28
PTPRK-204ENST00000368210 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
PTPRK-204ENST00000368210 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
PTPRK-204ENST00000368210 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
PTPRK-204ENST00000368210 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
PTPRK-204ENST00000368210 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
PTPRK-204ENST00000368210 KIF7Q2M1P5 1343 aa16.76■□□□□ 0.27
PTPRK-204ENST00000368210 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
PTPRK-204ENST00000368210 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
PTPRK-204ENST00000368210 HSCBQ8IWL3 235 aa16.75■□□□□ 0.27
PTPRK-204ENST00000368210 CENPJQ9HC77 1338 aaPredicted RBP16.75■□□□□ 0.27
PTPRK-204ENST00000368210 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
PTPRK-204ENST00000368210 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
PTPRK-204ENST00000368210 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
PTPRK-204ENST00000368210 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
PTPRK-204ENST00000368210 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
PTPRK-204ENST00000368210 TNNT3P45378 269 aaPredicted RBP16.73■□□□□ 0.27
PTPRK-204ENST00000368210 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
PTPRK-204ENST00000368210 PMFBP1Q8TBY8 1022 aa16.73■□□□□ 0.27
PTPRK-204ENST00000368210 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
PTPRK-204ENST00000368210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■□□ 16.3
PTPRK-204ENST00000368210 APBB1O00213 710 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 KCNJ4P48050 445 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
PTPRK-204ENST00000368210 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
PTPRK-204ENST00000368210 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 CYB5RLQ6IPT4 315 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
PTPRK-204ENST00000368210 STAC3Q96MF2 364 aa16.69■□□□□ 0.26
PTPRK-204ENST00000368210 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
PTPRK-204ENST00000368210 GSE1Q14687 1217 aa16.69■□□□□ 0.26
PTPRK-204ENST00000368210 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
PTPRK-204ENST00000368210 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
PTPRK-204ENST00000368210 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
PTPRK-204ENST00000368210 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
PTPRK-204ENST00000368210 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
PTPRK-204ENST00000368210 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
PTPRK-204ENST00000368210 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
PTPRK-204ENST00000368210 MIA2Q96PC5 1412 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 PLIN1O60240 522 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 FGD1P98174 961 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
PTPRK-204ENST00000368210 APAF1O14727 1248 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 E9PSI1 815 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 MCCP23508 829 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
PTPRK-204ENST00000368210 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
PTPRK-204ENST00000368210 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
PTPRK-204ENST00000368210 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
PTPRK-204ENST00000368210 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
PTPRK-204ENST00000368210 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
PTPRK-204ENST00000368210 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
PTPRK-204ENST00000368210 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
PTPRK-204ENST00000368210 AMPHP49418 695 aa16.62■□□□□ 0.25
PTPRK-204ENST00000368210 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
PTPRK-204ENST00000368210 PTMSP20962 102 aa16.61■□□□□ 0.25
PTPRK-204ENST00000368210 ARID3AQ99856 593 aa16.61■□□□□ 0.25
PTPRK-204ENST00000368210 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
PTPRK-204ENST00000368210 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-204ENST00000368210 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
PTPRK-204ENST00000368210 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
PTPRK-204ENST00000368210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.255e-6■■□□□ 12.8
PTPRK-204ENST00000368210 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
PTPRK-204ENST00000368210 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
PTPRK-204ENST00000368210 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
PTPRK-204ENST00000368210 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
PTPRK-204ENST00000368210 MFAP1P55081 439 aaKnown RBP16.58■□□□□ 0.24
PTPRK-204ENST00000368210 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.24
PTPRK-204ENST00000368210 COG3Q96JB2 828 aa16.58■□□□□ 0.24
PTPRK-204ENST00000368210 HMMRO75330 724 aa16.57■□□□□ 0.24
PTPRK-204ENST00000368210 C9orf84Q5VXU9 1444 aa16.57■□□□□ 0.24
PTPRK-204ENST00000368210 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
PTPRK-204ENST00000368210 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
PTPRK-204ENST00000368210 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
PTPRK-204ENST00000368210 ELL2O00472 640 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-204ENST00000368210 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
PTPRK-204ENST00000368210 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-204ENST00000368210 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
PTPRK-204ENST00000368210 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
PTPRK-204ENST00000368210 PDE4AP27815 886 aa16.55■□□□□ 0.24
PTPRK-204ENST00000368210 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
PTPRK-204ENST00000368210 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
PTPRK-204ENST00000368210 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
PTPRK-204ENST00000368210 NPHP1O15259 732 aa16.54■□□□□ 0.24
PTPRK-204ENST00000368210 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
PTPRK-204ENST00000368210 NBPF1Q3BBV0 1214 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
PTPRK-204ENST00000368210 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms