RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
NCSTN-202ENST00000368063 WDR62O43379 1518 aa16.93■□□□□ 0.3
NCSTN-202ENST00000368063 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
NCSTN-202ENST00000368063 BECN1Q14457 450 aa16.91■□□□□ 0.3
NCSTN-202ENST00000368063 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
NCSTN-202ENST00000368063 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
NCSTN-202ENST00000368063 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
NCSTN-202ENST00000368063 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
NCSTN-202ENST00000368063 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
NCSTN-202ENST00000368063 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.29
NCSTN-202ENST00000368063 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
NCSTN-202ENST00000368063 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
NCSTN-202ENST00000368063 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
NCSTN-202ENST00000368063 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
NCSTN-202ENST00000368063 KDM5CP41229 1560 aa16.88■□□□□ 0.29
NCSTN-202ENST00000368063 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
NCSTN-202ENST00000368063 USP47Q96K76 1375 aa16.87■□□□□ 0.29
NCSTN-202ENST00000368063 MCM4P33991 863 aa16.87■□□□□ 0.29
NCSTN-202ENST00000368063 GRPEL1Q9HAV7 217 aa16.87■□□□□ 0.29
NCSTN-202ENST00000368063 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
NCSTN-202ENST00000368063 RIPK4P57078 832 aa16.87■□□□□ 0.29
NCSTN-202ENST00000368063 FOXD1Q16676 465 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 P3H3Q8IVL6 736 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 RALBP1Q15311 655 aa16.86■□□□□ 0.29
NCSTN-202ENST00000368063 SMAP1Q8IYB5 467 aaPredicted RBP16.85■□□□□ 0.29
NCSTN-202ENST00000368063 MBD5Q9P267 1494 aa16.85■□□□□ 0.29
NCSTN-202ENST00000368063 E9PCH4 1651 aa16.84■□□□□ 0.29
NCSTN-202ENST00000368063 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
NCSTN-202ENST00000368063 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
NCSTN-202ENST00000368063 MTUS2Q5JR59 1369 aa16.83■□□□□ 0.29
NCSTN-202ENST00000368063 SEC24BO95487 1268 aa16.83■□□□□ 0.28
NCSTN-202ENST00000368063 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
NCSTN-202ENST00000368063 TRAK2O60296 914 aa16.82■□□□□ 0.28
NCSTN-202ENST00000368063 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
NCSTN-202ENST00000368063 ZMYM4Q5VZL5 1548 aa16.82■□□□□ 0.28
NCSTN-202ENST00000368063 INSRP06213 1382 aa16.81■□□□□ 0.28
NCSTN-202ENST00000368063 TERF1P54274 439 aa16.81■□□□□ 0.28
NCSTN-202ENST00000368063 TRIM44Q96DX7 344 aaPredicted RBP16.81■□□□□ 0.28
NCSTN-202ENST00000368063 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
NCSTN-202ENST00000368063 KIF14Q15058 1648 aa16.81■□□□□ 0.28
NCSTN-202ENST00000368063 SUPT6HQ7KZ85 1726 aaKnown RBP16.8■□□□□ 0.28
NCSTN-202ENST00000368063 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
NCSTN-202ENST00000368063 LRRIQ1Q96JM4 1722 aa16.8■□□□□ 0.28
NCSTN-202ENST00000368063 OFD1O75665 1012 aa16.79■□□□□ 0.28
NCSTN-202ENST00000368063 TBC1D2Q9BYX2 928 aa16.79■□□□□ 0.28
NCSTN-202ENST00000368063 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
NCSTN-202ENST00000368063 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
NCSTN-202ENST00000368063 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
NCSTN-202ENST00000368063 PARD3Q8TEW0 1356 aa16.77■□□□□ 0.28
NCSTN-202ENST00000368063 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
NCSTN-202ENST00000368063 UGGT2Q9NYU1 1516 aa16.77■□□□□ 0.27
NCSTN-202ENST00000368063 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.27
NCSTN-202ENST00000368063 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
NCSTN-202ENST00000368063 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
NCSTN-202ENST00000368063 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
NCSTN-202ENST00000368063 UTP14CQ5TAP6 766 aaKnown RBP16.74■□□□□ 0.27
NCSTN-202ENST00000368063 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
NCSTN-202ENST00000368063 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
NCSTN-202ENST00000368063 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
NCSTN-202ENST00000368063 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
NCSTN-202ENST00000368063 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
NCSTN-202ENST00000368063 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
NCSTN-202ENST00000368063 ZSCAN30Q86W11 494 aa16.72■□□□□ 0.27
NCSTN-202ENST00000368063 GAS2L3Q86XJ1 694 aa16.72■□□□□ 0.27
NCSTN-202ENST00000368063 BBXQ8WY36 941 aaPredicted RBP16.71■□□□□ 0.27
NCSTN-202ENST00000368063 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
NCSTN-202ENST00000368063 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.26
NCSTN-202ENST00000368063 DMTNQ08495 405 aa16.7■□□□□ 0.26
NCSTN-202ENST00000368063 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
NCSTN-202ENST00000368063 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
NCSTN-202ENST00000368063 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
NCSTN-202ENST00000368063 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
NCSTN-202ENST00000368063 MTERF4Q7Z6M4 381 aaKnown RBP16.69■□□□□ 0.26
NCSTN-202ENST00000368063 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
NCSTN-202ENST00000368063 DUSP27Q5VZP5 1158 aa16.68■□□□□ 0.26
NCSTN-202ENST00000368063 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
NCSTN-202ENST00000368063 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
NCSTN-202ENST00000368063 CCDC173Q0VFZ6 552 aa16.68■□□□□ 0.26
NCSTN-202ENST00000368063 STAC3Q96MF2 364 aa16.68■□□□□ 0.26
NCSTN-202ENST00000368063 IGHDP01880 384 aa16.67■□□□□ 0.26
NCSTN-202ENST00000368063 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
NCSTN-202ENST00000368063 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
NCSTN-202ENST00000368063 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
NCSTN-202ENST00000368063 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
NCSTN-202ENST00000368063 R3HCC1Q9Y3T6 440 aaKnown RBP16.65■□□□□ 0.26
NCSTN-202ENST00000368063 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
NCSTN-202ENST00000368063 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
NCSTN-202ENST00000368063 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
NCSTN-202ENST00000368063 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
NCSTN-202ENST00000368063 UPF2Q9HAU5 1272 aaKnown RBP16.64■□□□□ 0.25
NCSTN-202ENST00000368063 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
NCSTN-202ENST00000368063 UQCRHLA0A096LP55 91 aa16.63■□□□□ 0.25
NCSTN-202ENST00000368063 UQCRHP07919 91 aa16.63■□□□□ 0.25
NCSTN-202ENST00000368063 NAP1L2Q9ULW6 460 aaPredicted RBP16.63■□□□□ 0.25
NCSTN-202ENST00000368063 ZMYM3Q14202 1370 aa16.62■□□□□ 0.25
NCSTN-202ENST00000368063 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
NCSTN-202ENST00000368063 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms