RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 EIF2AK4Q9P2K8 1649 aaKnown RBP36.9■■■■□ 3.5
PFDN2-201ENST00000368010 NPATQ14207 1427 aa36.9■■■■□ 3.5
PFDN2-201ENST00000368010 SETD1BQ9UPS6 1966 aaKnown RBP36.88■■■■□ 3.49
PFDN2-201ENST00000368010 KDM5DQ9BY66 1539 aa36.88■■■■□ 3.49
PFDN2-201ENST00000368010 PPARGC1BQ86YN6 1023 aaKnown RBP36.87■■■■□ 3.49
PFDN2-201ENST00000368010 RNF17Q9BXT8 1623 aaKnown RBP36.85■■■■□ 3.49
PFDN2-201ENST00000368010 RRP7BPQ9NSQ0 103 aa36.85■■■■□ 3.49
PFDN2-201ENST00000368010 ANKRD30AQ9BXX3 1397 aa36.84■■■■□ 3.49
PFDN2-201ENST00000368010 WASHC2CQ9Y4E1 1318 aa36.84■■■■□ 3.49
PFDN2-201ENST00000368010 CHIC2Q9UKJ5 165 aa36.83■■■■□ 3.49
PFDN2-201ENST00000368010 PTPRKQ15262 1439 aa36.82■■■■□ 3.48
PFDN2-201ENST00000368010 ERBINQ96RT1 1412 aa36.82■■■■□ 3.48
PFDN2-201ENST00000368010 NCOA1Q15788 1441 aa36.76■■■■□ 3.48
PFDN2-201ENST00000368010 ADGRL2O95490 1459 aa36.76■■■■□ 3.48
PFDN2-201ENST00000368010 MROH1Q8NDA8 1641 aa36.74■■■■□ 3.47
PFDN2-201ENST00000368010 PZPP20742 1482 aa36.72■■■■□ 3.47
PFDN2-201ENST00000368010 ZC3H13Q5T200 1668 aaKnown RBP36.72■■■■□ 3.47
PFDN2-201ENST00000368010 ABCC3O15438 1527 aa36.71■■■■□ 3.47
PFDN2-201ENST00000368010 MYO3AQ8NEV4 1616 aa36.68■■■■□ 3.46
PFDN2-201ENST00000368010 PRDM15P57071 1507 aaPredicted RBP36.67■■■■□ 3.46
PFDN2-201ENST00000368010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.66■■■■□ 3.467e-9■□□□□ 11
PFDN2-201ENST00000368010 FBXO31Q5XUX0 539 aaPredicted RBP36.64■■■■□ 3.46
PFDN2-201ENST00000368010 DEPDC5O75140 1603 aa36.63■■■■□ 3.45
PFDN2-201ENST00000368010 TNRQ92752 1358 aa36.62■■■■□ 3.45
PFDN2-201ENST00000368010 ZNF142P52746 1687 aaPredicted RBP36.61■■■■□ 3.45
PFDN2-201ENST00000368010 CEP170BQ9Y4F5 1589 aaPredicted RBP36.61■■■■□ 3.45
PFDN2-201ENST00000368010 CEP152O94986 1710 aa36.59■■■■□ 3.45
PFDN2-201ENST00000368010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.59■■■■□ 3.451e-8■■□□□ 12.4
PFDN2-201ENST00000368010 KANK1Q14678 1352 aa36.58■■■■□ 3.45
PFDN2-201ENST00000368010 ANKRD50Q9ULJ7 1429 aa36.58■■■■□ 3.45
PFDN2-201ENST00000368010 CAMSAP1Q5T5Y3 1602 aa36.57■■■■□ 3.44
PFDN2-201ENST00000368010 ROCK1Q13464 1354 aa36.56■■■■□ 3.44
PFDN2-201ENST00000368010 ITGAEP38570 1179 aa36.55■■■■□ 3.44
PFDN2-201ENST00000368010 RRBP1Q9P2E9 1410 aaKnown RBP36.55■■■■□ 3.44
PFDN2-201ENST00000368010 STRCQ7RTU9 1775 aa36.54■■■■□ 3.44
PFDN2-201ENST00000368010 A2ML1A8K2U0 1454 aa36.54■■■■□ 3.44
PFDN2-201ENST00000368010 DMRT2Q9Y5R5 561 aa36.53■■■■□ 3.44
PFDN2-201ENST00000368010 SPATA31D1Q6ZQQ2 1576 aa36.49■■■■□ 3.43
PFDN2-201ENST00000368010 ARHGAP31Q2M1Z3 1444 aa36.49■■■■□ 3.43
PFDN2-201ENST00000368010 ERVK-7P63135 1459 aa36.49■■■■□ 3.43
PFDN2-201ENST00000368010 NLRP1Q9C000 1473 aa36.48■■■■□ 3.43
PFDN2-201ENST00000368010 VWDEQ8N2E2 1590 aa36.47■■■■□ 3.43
PFDN2-201ENST00000368010 LMTK2Q8IWU2 1503 aa36.46■■■■□ 3.43
PFDN2-201ENST00000368010 PLA2R1Q13018 1463 aa36.46■■■■□ 3.43
PFDN2-201ENST00000368010 PTPRTO14522 1441 aa36.42■■■■□ 3.42
PFDN2-201ENST00000368010 PKD2Q13563 968 aa36.36■■■■□ 3.41
PFDN2-201ENST00000368010 UNC13BO14795 1591 aa36.36■■■■□ 3.41
PFDN2-201ENST00000368010 UGGT1Q9NYU2 1555 aa36.36■■■■□ 3.41
PFDN2-201ENST00000368010 NCKAP5LQ9HCH0 1330 aa36.35■■■■□ 3.41
PFDN2-201ENST00000368010 EFCAB6Q5THR3 1501 aa36.34■■■■□ 3.41
PFDN2-201ENST00000368010 THEMISQ8N1K5 641 aaPredicted RBP36.32■■■■□ 3.4
PFDN2-201ENST00000368010 CFAP65Q6ZU64 1925 aaKnown RBP36.31■■■■□ 3.4
PFDN2-201ENST00000368010 TET3O43151 1660 aa36.25■■■■□ 3.39
PFDN2-201ENST00000368010 RPRD2Q5VT52 1461 aaKnown RBP36.24■■■■□ 3.39
PFDN2-201ENST00000368010 NOS1P29475 1434 aa36.21■■■■□ 3.39
PFDN2-201ENST00000368010 ANKLE2Q86XL3 938 aa36.21■■■■□ 3.39
PFDN2-201ENST00000368010 POLR1AO95602 1720 aaPredicted RBP36.2■■■■□ 3.39
PFDN2-201ENST00000368010 IQGAP3Q86VI3 1631 aa36.2■■■■□ 3.39
PFDN2-201ENST00000368010 NUP155O75694 1391 aa36.19■■■■□ 3.38
PFDN2-201ENST00000368010 ILDR1Q86SU0 546 aaPredicted RBP36.19■■■■□ 3.38
PFDN2-201ENST00000368010 GCC2Q8IWJ2 1684 aa36.19■■■■□ 3.38
PFDN2-201ENST00000368010 UBR1Q8IWV7 1749 aa36.18■■■■□ 3.38
PFDN2-201ENST00000368010 SYNMO15061 1565 aa36.18■■■■□ 3.38
PFDN2-201ENST00000368010 NAIPQ13075 1403 aa36.17■■■■□ 3.38
PFDN2-201ENST00000368010 CERKQ8TCT0 537 aa36.17■■■■□ 3.38
PFDN2-201ENST00000368010 NEURL4Q96JN8 1562 aa36.16■■■■□ 3.38
PFDN2-201ENST00000368010 PIK3C2BO00750 1634 aa36.15■■■■□ 3.38
PFDN2-201ENST00000368010 HFM1A2PYH4 1435 aa36.12■■■■□ 3.37
PFDN2-201ENST00000368010 IDI1Q13907 227 aa36.11■■■■□ 3.37
PFDN2-201ENST00000368010 FBXO41Q8TF61 875 aa36.11■■■■□ 3.37
PFDN2-201ENST00000368010 STAG3Q9UJ98 1225 aa36.11■■■■□ 3.37
PFDN2-201ENST00000368010 SLC52A1Q9NWF4 448 aa36.1■■■■□ 3.37
PFDN2-201ENST00000368010 MED14O60244 1454 aa36.09■■■■□ 3.37
PFDN2-201ENST00000368010 LTBP4Q8N2S1 1624 aa36.08■■■■□ 3.37
PFDN2-201ENST00000368010 NPHP4O75161 1426 aaPredicted RBP36.08■■■■□ 3.37
PFDN2-201ENST00000368010 E9PCH4 1651 aa36.07■■■■□ 3.37
PFDN2-201ENST00000368010 SLIT1O75093 1534 aa36.06■■■■□ 3.36
PFDN2-201ENST00000368010 KDM5AP29375 1690 aaKnown RBP36.06■■■■□ 3.36
PFDN2-201ENST00000368010 ARHGAP23Q9P227 1491 aa36.05■■■■□ 3.36
PFDN2-201ENST00000368010 ZNF335Q9H4Z2 1342 aaPredicted RBP36.05■■■■□ 3.36
PFDN2-201ENST00000368010 SCAF11Q99590 1463 aaKnown RBP36.03■■■■□ 3.36
PFDN2-201ENST00000368010 ADGRB3O60242 1522 aa36.03■■■■□ 3.36
PFDN2-201ENST00000368010 TMEM2Q9UHN6 1383 aa36.01■■■■□ 3.35
PFDN2-201ENST00000368010 IQGAP1P46940 1657 aa36■■■■□ 3.35
PFDN2-201ENST00000368010 TXNDC2Q86VQ3 553 aa35.99■■■■□ 3.35
PFDN2-201ENST00000368010 EID1Q9Y6B2 187 aa35.99■■■■□ 3.35
PFDN2-201ENST00000368010 LTKP29376 864 aa35.95■■■■□ 3.35
PFDN2-201ENST00000368010 TRIM52Q96A61 297 aa35.92■■■■□ 3.34
PFDN2-201ENST00000368010 IQSEC2Q5JU85 1478 aa35.91■■■■□ 3.34
PFDN2-201ENST00000368010 TMEM131LA2VDJ0 1609 aa35.86■■■■□ 3.33
PFDN2-201ENST00000368010 CHGAP10645 457 aaKnown RBP35.85■■■■□ 3.33
PFDN2-201ENST00000368010 CPS1P31327 1500 aa35.84■■■■□ 3.33
PFDN2-201ENST00000368010 SPHKAPQ2M3C7 1700 aa35.84■■■■□ 3.33
PFDN2-201ENST00000368010 MYO5BQ9ULV0 1848 aa35.79■■■■□ 3.32
PFDN2-201ENST00000368010 SLC4A1APQ9BWU0 796 aaKnown RBP35.79■■■■□ 3.32
PFDN2-201ENST00000368010 ZFYVE9O95405 1425 aa35.79■■■■□ 3.32
PFDN2-201ENST00000368010 RIMS2Q9UQ26 1411 aa35.78■■■■□ 3.32
PFDN2-201ENST00000368010 HDGFP51858 240 aaKnown RBP35.77■■■■□ 3.32
PFDN2-201ENST00000368010 TRPM2O94759 1503 aa35.75■■■■□ 3.31
PFDN2-201ENST00000368010 PPP1R15AO75807 674 aaPredicted RBP35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms