RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 ANKRD30BQ9BXX2 1392 aa9.49□□□□□ -0.89
VTA1-202ENST00000367630 ERBINQ96RT1 1412 aa9.49□□□□□ -0.89
VTA1-202ENST00000367630 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
VTA1-202ENST00000367630 ABCC5O15440 1437 aa9.48□□□□□ -0.89
VTA1-202ENST00000367630 ARHGAP5Q13017 1502 aa9.47□□□□□ -0.89
VTA1-202ENST00000367630 UHRF1BP1Q6BDS2 1440 aa9.47□□□□□ -0.89
VTA1-202ENST00000367630 DUOX2Q9NRD8 1548 aa9.47□□□□□ -0.89
VTA1-202ENST00000367630 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
VTA1-202ENST00000367630 KDM5DQ9BY66 1539 aa9.46□□□□□ -0.89
VTA1-202ENST00000367630 MYH16Q9H6N6 1097 aa9.45□□□□□ -0.9
VTA1-202ENST00000367630 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
VTA1-202ENST00000367630 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
VTA1-202ENST00000367630 RPGRIP1LQ68CZ1 1315 aa9.44□□□□□ -0.9
VTA1-202ENST00000367630 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
VTA1-202ENST00000367630 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
VTA1-202ENST00000367630 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
VTA1-202ENST00000367630 RCAN3Q9UKA8 241 aa9.43□□□□□ -0.9
VTA1-202ENST00000367630 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
VTA1-202ENST00000367630 CFAP74Q9C0B2 1584 aa9.43□□□□□ -0.9
VTA1-202ENST00000367630 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
VTA1-202ENST00000367630 CDK13Q14004 1512 aaKnown RBP9.42□□□□□ -0.9
VTA1-202ENST00000367630 MAPK8IP3Q9UPT6 1336 aa9.42□□□□□ -0.9
VTA1-202ENST00000367630 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
VTA1-202ENST00000367630 ESF1Q9H501 851 aaKnown RBP9.42□□□□□ -0.9
VTA1-202ENST00000367630 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 KIF7Q2M1P5 1343 aa9.41□□□□□ -0.9
VTA1-202ENST00000367630 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
VTA1-202ENST00000367630 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
VTA1-202ENST00000367630 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 PRG4Q92954 1404 aaPredicted RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 L1TD1Q5T7N2 865 aaKnown RBP9.41□□□□□ -0.9
VTA1-202ENST00000367630 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
VTA1-202ENST00000367630 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
VTA1-202ENST00000367630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■□□□ 12.9
VTA1-202ENST00000367630 IPO8O15397 1037 aaKnown RBP9.4□□□□□ -0.91
VTA1-202ENST00000367630 CASC1Q6TDU7 716 aa9.4□□□□□ -0.91
VTA1-202ENST00000367630 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.91
VTA1-202ENST00000367630 ARAP3Q8WWN8 1544 aa9.39□□□□□ -0.91
VTA1-202ENST00000367630 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
VTA1-202ENST00000367630 ARID3CA6NKF2 412 aa9.39□□□□□ -0.91
VTA1-202ENST00000367630 E9PSI1 815 aa9.39□□□□□ -0.91
VTA1-202ENST00000367630 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
VTA1-202ENST00000367630 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
VTA1-202ENST00000367630 NSD2O96028 1365 aa9.38□□□□□ -0.91
VTA1-202ENST00000367630 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
VTA1-202ENST00000367630 CROCC2H7BZ55 1655 aa9.38□□□□□ -0.91
VTA1-202ENST00000367630 POLR1AO95602 1720 aaPredicted RBP9.38□□□□□ -0.91
VTA1-202ENST00000367630 GLIPR1L2Q4G1C9 344 aa9.38□□□□□ -0.91
VTA1-202ENST00000367630 LAMC1P11047 1609 aa9.37□□□□□ -0.91
VTA1-202ENST00000367630 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
VTA1-202ENST00000367630 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
VTA1-202ENST00000367630 RRP1P56182 461 aaKnown RBP9.36□□□□□ -0.91
VTA1-202ENST00000367630 PLPPR3Q6T4P5 718 aa9.36□□□□□ -0.91
VTA1-202ENST00000367630 UHRF1BP1LA0JNW5 1464 aa9.36□□□□□ -0.91
VTA1-202ENST00000367630 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
VTA1-202ENST00000367630 DISP1Q96F81 1524 aa9.35□□□□□ -0.91
VTA1-202ENST00000367630 STAG3Q9UJ98 1225 aa9.35□□□□□ -0.91
VTA1-202ENST00000367630 NPC1L1Q9UHC9 1359 aa9.35□□□□□ -0.91
VTA1-202ENST00000367630 ABCA8O94911 1581 aa9.35□□□□□ -0.91
VTA1-202ENST00000367630 PLXNC1O60486 1568 aa9.35□□□□□ -0.91
VTA1-202ENST00000367630 HDGFL2Q7Z4V5 671 aaPredicted RBP9.34□□□□□ -0.91
VTA1-202ENST00000367630 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
VTA1-202ENST00000367630 ABCC2Q92887 1545 aa9.34□□□□□ -0.91
VTA1-202ENST00000367630 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
VTA1-202ENST00000367630 PPP6R1Q9UPN7 881 aa9.33□□□□□ -0.92
VTA1-202ENST00000367630 HDAC5Q9UQL6 1122 aa9.33□□□□□ -0.92
VTA1-202ENST00000367630 SCAF11Q99590 1463 aaKnown RBP9.33□□□□□ -0.92
VTA1-202ENST00000367630 EVC2Q86UK5 1308 aa9.32□□□□□ -0.92
VTA1-202ENST00000367630 MORC1Q86VD1 984 aa9.32□□□□□ -0.92
VTA1-202ENST00000367630 PREX2Q70Z35 1606 aa9.32□□□□□ -0.92
VTA1-202ENST00000367630 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
VTA1-202ENST00000367630 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 ZMYM3Q14202 1370 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 PLCH2O75038 1416 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 GPRASP1Q5JY77 1395 aa9.31□□□□□ -0.92
VTA1-202ENST00000367630 PZPP20742 1482 aa9.3□□□□□ -0.92
VTA1-202ENST00000367630 DHX29Q7Z478 1369 aaKnown RBP9.3□□□□□ -0.92
VTA1-202ENST00000367630 HNRNPMP52272 730 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTA1-202ENST00000367630 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
VTA1-202ENST00000367630 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTA1-202ENST00000367630 ATP10AO60312 1499 aa9.29□□□□□ -0.92
VTA1-202ENST00000367630 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
VTA1-202ENST00000367630 PTPRKQ15262 1439 aa9.29□□□□□ -0.92
VTA1-202ENST00000367630 ST20-MTHFSA0A0A6YYL1 179 aa9.29□□□□□ -0.92
VTA1-202ENST00000367630 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
VTA1-202ENST00000367630 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
VTA1-202ENST00000367630 KIF16BQ96L93 1317 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 UNC13BO14795 1591 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
VTA1-202ENST00000367630 ISY1Q9ULR0 285 aaKnown RBP9.28□□□□□ -0.92
VTA1-202ENST00000367630 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 NEURL4Q96JN8 1562 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 HSP90AA1P07900 732 aaKnown RBP9.28□□□□□ -0.92
VTA1-202ENST00000367630 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
VTA1-202ENST00000367630 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms