RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
SHPRH-202ENST00000367503 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
SHPRH-202ENST00000367503 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
SHPRH-202ENST00000367503 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
SHPRH-202ENST00000367503 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
SHPRH-202ENST00000367503 EFCAB2Q5VUJ9 269 aa15.23■□□□□ 0.03
SHPRH-202ENST00000367503 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
SHPRH-202ENST00000367503 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
SHPRH-202ENST00000367503 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
SHPRH-202ENST00000367503 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
SHPRH-202ENST00000367503 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
SHPRH-202ENST00000367503 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
SHPRH-202ENST00000367503 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
SHPRH-202ENST00000367503 ZMYND15Q9H091 742 aa15.21■□□□□ 0.03
SHPRH-202ENST00000367503 TRAK2O60296 914 aa15.21■□□□□ 0.02
SHPRH-202ENST00000367503 NASPP49321 788 aaPredicted RBP15.2■□□□□ 0.02
SHPRH-202ENST00000367503 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
SHPRH-202ENST00000367503 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
SHPRH-202ENST00000367503 ST18O60284 1047 aa15.2■□□□□ 0.02
SHPRH-202ENST00000367503 GOLGA6L1Q8N7Z2 621 aa15.2■□□□□ 0.02
SHPRH-202ENST00000367503 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
SHPRH-202ENST00000367503 CGNL1Q0VF96 1302 aa15.19■□□□□ 0.02
SHPRH-202ENST00000367503 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
SHPRH-202ENST00000367503 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHPRH-202ENST00000367503 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
SHPRH-202ENST00000367503 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
SHPRH-202ENST00000367503 KIAA1211Q6ZU35 1233 aa15.17■□□□□ 0.02
SHPRH-202ENST00000367503 USP47Q96K76 1375 aa15.17■□□□□ 0.02
SHPRH-202ENST00000367503 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
SHPRH-202ENST00000367503 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
SHPRH-202ENST00000367503 PANK3Q9H999 370 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 CCDC39Q9UFE4 941 aa15.16■□□□□ 0.02
SHPRH-202ENST00000367503 GGT6Q6P531 493 aa15.15■□□□□ 0.02
SHPRH-202ENST00000367503 ESPNB1AK53 854 aa15.15■□□□□ 0.02
SHPRH-202ENST00000367503 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
SHPRH-202ENST00000367503 E9PSI1 815 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 APBB1O00213 710 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 ISY1Q9ULR0 285 aaKnown RBP15.14■□□□□ 0.01
SHPRH-202ENST00000367503 CCDC66A2RUB6 948 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHPRH-202ENST00000367503 CHMP4AQ9BY43 222 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 A0A0G2JS52 829 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
SHPRH-202ENST00000367503 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
SHPRH-202ENST00000367503 STK26Q9P289 416 aa15.13■□□□□ 0.01
SHPRH-202ENST00000367503 HMMRO75330 724 aa15.13■□□□□ 0.01
SHPRH-202ENST00000367503 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
SHPRH-202ENST00000367503 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
SHPRH-202ENST00000367503 NAP1L2Q9ULW6 460 aaPredicted RBP15.12■□□□□ 0.01
SHPRH-202ENST00000367503 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
SHPRH-202ENST00000367503 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
SHPRH-202ENST00000367503 TPM4P67936 248 aa15.12■□□□□ 0.01
SHPRH-202ENST00000367503 GRPEL1Q9HAV7 217 aa15.11■□□□□ 0.01
SHPRH-202ENST00000367503 COG6Q9Y2V7 657 aa15.11■□□□□ 0.01
SHPRH-202ENST00000367503 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
SHPRH-202ENST00000367503 C22orf23Q9BZE7 217 aa15.1■□□□□ 0.01
SHPRH-202ENST00000367503 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
SHPRH-202ENST00000367503 ZNF592Q92610 1267 aa15.1■□□□□ 0.01
SHPRH-202ENST00000367503 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
SHPRH-202ENST00000367503 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
SHPRH-202ENST00000367503 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
SHPRH-202ENST00000367503 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
SHPRH-202ENST00000367503 KIF3BO15066 747 aa15.09■□□□□ 0.01
SHPRH-202ENST00000367503 PDCL3Q9H2J4 239 aa15.09■□□□□ 0.01
SHPRH-202ENST00000367503 KIF21BO75037 1637 aa15.09■□□□□ 0.01
SHPRH-202ENST00000367503 NUCB2P80303 420 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 STK31Q9BXU1 1019 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 UQCRHLA0A096LP55 91 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 UQCRHP07919 91 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 GPS2Q13227 327 aa15.08■□□□□ 0
SHPRH-202ENST00000367503 SOX12O15370 315 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 MCTP1Q6DN14 999 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 IGF1RP08069 1367 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
SHPRH-202ENST00000367503 HDAC5Q9UQL6 1122 aa15.07■□□□□ 0
SHPRH-202ENST00000367503 APPP05067 770 aa15.06■□□□□ 0
SHPRH-202ENST00000367503 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ 0
SHPRH-202ENST00000367503 WASHC2AQ641Q2 1341 aa15.05■□□□□ 0
SHPRH-202ENST00000367503 NOM1Q5C9Z4 860 aaKnown RBP15.04■□□□□ -0
SHPRH-202ENST00000367503 ATP6V1DQ9Y5K8 247 aa15.04■□□□□ -0
SHPRH-202ENST00000367503 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
SHPRH-202ENST00000367503 APAF1O14727 1248 aa15.03■□□□□ -0
SHPRH-202ENST00000367503 JPH4Q96JJ6 628 aa15.03■□□□□ -0
SHPRH-202ENST00000367503 FOXD4L6Q3SYB3 417 aaPredicted RBP15.03■□□□□ -0
SHPRH-202ENST00000367503 FOXD4L3Q6VB84 417 aaPredicted RBP15.03■□□□□ -0
SHPRH-202ENST00000367503 TAF3Q5VWG9 929 aa15.03■□□□□ -0
SHPRH-202ENST00000367503 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
SHPRH-202ENST00000367503 LRRC9Q6ZRR7 1453 aa15.02■□□□□ -0
SHPRH-202ENST00000367503 GOLGA6L19H0YKK7 550 aa15.02■□□□□ -0
SHPRH-202ENST00000367503 RRP7AQ9Y3A4 280 aaKnown RBP15.02□□□□□ -0.01
SHPRH-202ENST00000367503 AAMPQ13685 434 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms