RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
CTSD-202ENST00000367196 KIF3BO15066 747 aa23.36■■□□□ 1.33
CTSD-202ENST00000367196 APLP2Q06481 763 aa23.36■■□□□ 1.33
CTSD-202ENST00000367196 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
CTSD-202ENST00000367196 KANK4Q5T7N3 995 aaPredicted RBP23.32■■□□□ 1.32
CTSD-202ENST00000367196 PZPP20742 1482 aa23.3■■□□□ 1.32
CTSD-202ENST00000367196 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
CTSD-202ENST00000367196 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
CTSD-202ENST00000367196 PKD2Q13563 968 aa23.29■■□□□ 1.32
CTSD-202ENST00000367196 A2ML1A8K2U0 1454 aa23.29■■□□□ 1.32
CTSD-202ENST00000367196 RNF17Q9BXT8 1623 aaKnown RBP23.28■■□□□ 1.32
CTSD-202ENST00000367196 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
CTSD-202ENST00000367196 TNRQ92752 1358 aa23.26■■□□□ 1.31
CTSD-202ENST00000367196 TCOF1Q13428 1488 aaKnown RBP23.25■■□□□ 1.31
CTSD-202ENST00000367196 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
CTSD-202ENST00000367196 DNMT1P26358 1616 aaKnown RBP23.24■■□□□ 1.31
CTSD-202ENST00000367196 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
CTSD-202ENST00000367196 LTBP4Q8N2S1 1624 aa23.23■■□□□ 1.31
CTSD-202ENST00000367196 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
CTSD-202ENST00000367196 NCKAP5LQ9HCH0 1330 aa23.22■■□□□ 1.31
CTSD-202ENST00000367196 DUOX2Q9NRD8 1548 aa23.22■■□□□ 1.31
CTSD-202ENST00000367196 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
CTSD-202ENST00000367196 NLRP1Q9C000 1473 aa23.2■■□□□ 1.3
CTSD-202ENST00000367196 POLR1AO95602 1720 aaPredicted RBP23.19■■□□□ 1.3
CTSD-202ENST00000367196 ABCC3O15438 1527 aa23.19■■□□□ 1.3
CTSD-202ENST00000367196 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
CTSD-202ENST00000367196 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
CTSD-202ENST00000367196 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
CTSD-202ENST00000367196 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
CTSD-202ENST00000367196 MROH1Q8NDA8 1641 aa23.14■■□□□ 1.29
CTSD-202ENST00000367196 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.29
CTSD-202ENST00000367196 ABCC5O15440 1437 aa23.13■■□□□ 1.29
CTSD-202ENST00000367196 DAPK1P53355 1430 aa23.13■■□□□ 1.29
CTSD-202ENST00000367196 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
CTSD-202ENST00000367196 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
CTSD-202ENST00000367196 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
CTSD-202ENST00000367196 CEP152O94986 1710 aa23.11■■□□□ 1.29
CTSD-202ENST00000367196 PRDM15P57071 1507 aaPredicted RBP23.11■■□□□ 1.29
CTSD-202ENST00000367196 ERVK-7P63135 1459 aa23.09■■□□□ 1.29
CTSD-202ENST00000367196 NEURL4Q96JN8 1562 aa23.09■■□□□ 1.29
CTSD-202ENST00000367196 ANKLE2Q86XL3 938 aa23.08■■□□□ 1.29
CTSD-202ENST00000367196 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
CTSD-202ENST00000367196 DEPDC5O75140 1603 aa23.07■■□□□ 1.28
CTSD-202ENST00000367196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
CTSD-202ENST00000367196 KANK1Q14678 1352 aa23.05■■□□□ 1.28
CTSD-202ENST00000367196 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
CTSD-202ENST00000367196 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
CTSD-202ENST00000367196 CPS1P31327 1500 aa23.03■■□□□ 1.28
CTSD-202ENST00000367196 MED14O60244 1454 aa23.03■■□□□ 1.28
CTSD-202ENST00000367196 NPHP4O75161 1426 aaPredicted RBP23■■□□□ 1.27
CTSD-202ENST00000367196 CFAP65Q6ZU64 1925 aaKnown RBP23■■□□□ 1.27
CTSD-202ENST00000367196 IQGAP1P46940 1657 aa23■■□□□ 1.27
CTSD-202ENST00000367196 UBR1Q8IWV7 1749 aa22.98■■□□□ 1.27
CTSD-202ENST00000367196 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
CTSD-202ENST00000367196 UBAP1LF5GYI3 381 aa22.97■■□□□ 1.27
CTSD-202ENST00000367196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.96■■□□□ 1.27
CTSD-202ENST00000367196 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
CTSD-202ENST00000367196 LMTK2Q8IWU2 1503 aa22.96■■□□□ 1.27
CTSD-202ENST00000367196 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
CTSD-202ENST00000367196 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
CTSD-202ENST00000367196 SCAF11Q99590 1463 aaKnown RBP22.92■■□□□ 1.26
CTSD-202ENST00000367196 SLIT1O75093 1534 aa22.91■■□□□ 1.26
CTSD-202ENST00000367196 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
CTSD-202ENST00000367196 EFCAB6Q5THR3 1501 aa22.89■■□□□ 1.26
CTSD-202ENST00000367196 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
CTSD-202ENST00000367196 PIK3C2BO00750 1634 aa22.88■■□□□ 1.25
CTSD-202ENST00000367196 ANKRD50Q9ULJ7 1429 aa22.88■■□□□ 1.25
CTSD-202ENST00000367196 SYNMO15061 1565 aa22.88■■□□□ 1.25
CTSD-202ENST00000367196 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
CTSD-202ENST00000367196 TOM1O60784 492 aa22.87■■□□□ 1.25
CTSD-202ENST00000367196 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
CTSD-202ENST00000367196 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
CTSD-202ENST00000367196 RPRD2Q5VT52 1461 aaKnown RBP22.84■■□□□ 1.25
CTSD-202ENST00000367196 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
CTSD-202ENST00000367196 TMEM2Q9UHN6 1383 aa22.81■■□□□ 1.24
CTSD-202ENST00000367196 NOS1P29475 1434 aa22.81■■□□□ 1.24
CTSD-202ENST00000367196 SCAF1Q9H7N4 1312 aaKnown RBP22.81■■□□□ 1.24
CTSD-202ENST00000367196 TET3O43151 1660 aa22.8■■□□□ 1.24
CTSD-202ENST00000367196 ROCK1Q13464 1354 aa22.79■■□□□ 1.24
CTSD-202ENST00000367196 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
CTSD-202ENST00000367196 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
CTSD-202ENST00000367196 UNC13BO14795 1591 aa22.78■■□□□ 1.24
CTSD-202ENST00000367196 LTKP29376 864 aa22.78■■□□□ 1.24
CTSD-202ENST00000367196 SLC52A1Q9NWF4 448 aa22.78■■□□□ 1.24
CTSD-202ENST00000367196 GCC2Q8IWJ2 1684 aa22.77■■□□□ 1.24
CTSD-202ENST00000367196 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
CTSD-202ENST00000367196 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
CTSD-202ENST00000367196 IDI1Q13907 227 aa22.76■■□□□ 1.23
CTSD-202ENST00000367196 IQGAP3Q86VI3 1631 aa22.69■■□□□ 1.22
CTSD-202ENST00000367196 HSPA1LP34931 641 aa22.68■■□□□ 1.22
CTSD-202ENST00000367196 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
CTSD-202ENST00000367196 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
CTSD-202ENST00000367196 E9PCH4 1651 aa22.65■■□□□ 1.22
CTSD-202ENST00000367196 ITGAEP38570 1179 aa22.63■■□□□ 1.21
CTSD-202ENST00000367196 TMEM131LA2VDJ0 1609 aa22.63■■□□□ 1.21
CTSD-202ENST00000367196 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
CTSD-202ENST00000367196 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
CTSD-202ENST00000367196 KCNA6P17658 529 aa22.62■■□□□ 1.21
CTSD-202ENST00000367196 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
CTSD-202ENST00000367196 ZFYVE9O95405 1425 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms