RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 UNC13BO14795 1591 aa23.38■■□□□ 1.33
CNIH4-204ENST00000366860 DHX29Q7Z478 1369 aaKnown RBP23.38■■□□□ 1.33
CNIH4-204ENST00000366860 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
CNIH4-204ENST00000366860 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
CNIH4-204ENST00000366860 AGLP35573 1532 aa23.37■■□□□ 1.33
CNIH4-204ENST00000366860 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
CNIH4-204ENST00000366860 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.32
CNIH4-204ENST00000366860 KDM5DQ9BY66 1539 aa23.3■■□□□ 1.32
CNIH4-204ENST00000366860 HRCP23327 699 aa23.3■■□□□ 1.32
CNIH4-204ENST00000366860 FAM135AQ9P2D6 1515 aa23.29■■□□□ 1.32
CNIH4-204ENST00000366860 SIGLEC1Q9BZZ2 1709 aa23.29■■□□□ 1.32
CNIH4-204ENST00000366860 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
CNIH4-204ENST00000366860 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
CNIH4-204ENST00000366860 MROH1Q8NDA8 1641 aa23.27■■□□□ 1.32
CNIH4-204ENST00000366860 PIAS4Q8N2W9 510 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-204ENST00000366860 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
CNIH4-204ENST00000366860 KIF3BO15066 747 aa23.21■■□□□ 1.31
CNIH4-204ENST00000366860 KANK1Q14678 1352 aa23.21■■□□□ 1.31
CNIH4-204ENST00000366860 CEP152O94986 1710 aa23.19■■□□□ 1.3
CNIH4-204ENST00000366860 TET3O43151 1660 aa23.19■■□□□ 1.3
CNIH4-204ENST00000366860 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
CNIH4-204ENST00000366860 NUP155O75694 1391 aa23.16■■□□□ 1.3
CNIH4-204ENST00000366860 ABCC3O15438 1527 aa23.14■■□□□ 1.3
CNIH4-204ENST00000366860 PZPP20742 1482 aa23.14■■□□□ 1.29
CNIH4-204ENST00000366860 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
CNIH4-204ENST00000366860 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.29
CNIH4-204ENST00000366860 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
CNIH4-204ENST00000366860 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
CNIH4-204ENST00000366860 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
CNIH4-204ENST00000366860 MROH2AA6NES4 1674 aa23.12■■□□□ 1.29
CNIH4-204ENST00000366860 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
CNIH4-204ENST00000366860 GGT6Q6P531 493 aa23.09■■□□□ 1.29
CNIH4-204ENST00000366860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
CNIH4-204ENST00000366860 CNTLNQ9NXG0 1405 aa23.08■■□□□ 1.29
CNIH4-204ENST00000366860 DHX57Q6P158 1386 aaKnown RBP23.07■■□□□ 1.28
CNIH4-204ENST00000366860 E9PCH4 1651 aa23.06■■□□□ 1.28
CNIH4-204ENST00000366860 ADAMTSL3P82987 1691 aa23.06■■□□□ 1.28
CNIH4-204ENST00000366860 RPRD2Q5VT52 1461 aaKnown RBP23.05■■□□□ 1.28
CNIH4-204ENST00000366860 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
CNIH4-204ENST00000366860 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
CNIH4-204ENST00000366860 MADDQ8WXG6 1647 aa23.03■■□□□ 1.28
CNIH4-204ENST00000366860 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
CNIH4-204ENST00000366860 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
CNIH4-204ENST00000366860 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
CNIH4-204ENST00000366860 MLECQ14165 292 aa23.01■■□□□ 1.27
CNIH4-204ENST00000366860 ESF1Q9H501 851 aaKnown RBP23.01■■□□□ 1.27
CNIH4-204ENST00000366860 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
CNIH4-204ENST00000366860 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
CNIH4-204ENST00000366860 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
CNIH4-204ENST00000366860 NPATQ14207 1427 aa22.97■■□□□ 1.27
CNIH4-204ENST00000366860 TRPM2O94759 1503 aa22.96■■□□□ 1.27
CNIH4-204ENST00000366860 C3P01024 1663 aa22.95■■□□□ 1.26
CNIH4-204ENST00000366860 PKD2Q13563 968 aa22.95■■□□□ 1.26
CNIH4-204ENST00000366860 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
CNIH4-204ENST00000366860 SPATA31D1Q6ZQQ2 1576 aa22.92■■□□□ 1.26
CNIH4-204ENST00000366860 ERVK-7P63135 1459 aa22.9■■□□□ 1.26
CNIH4-204ENST00000366860 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
CNIH4-204ENST00000366860 PTPRTO14522 1441 aa22.89■■□□□ 1.25
CNIH4-204ENST00000366860 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
CNIH4-204ENST00000366860 NOS1P29475 1434 aa22.87■■□□□ 1.25
CNIH4-204ENST00000366860 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
CNIH4-204ENST00000366860 SYNMO15061 1565 aa22.86■■□□□ 1.25
CNIH4-204ENST00000366860 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
CNIH4-204ENST00000366860 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
CNIH4-204ENST00000366860 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
CNIH4-204ENST00000366860 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
CNIH4-204ENST00000366860 KIF1BO60333 1816 aa22.82■■□□□ 1.24
CNIH4-204ENST00000366860 PTPRMP28827 1452 aa22.8■■□□□ 1.24
CNIH4-204ENST00000366860 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
CNIH4-204ENST00000366860 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
CNIH4-204ENST00000366860 KDM5AP29375 1690 aaKnown RBP22.77■■□□□ 1.24
CNIH4-204ENST00000366860 TNRQ92752 1358 aa22.76■■□□□ 1.23
CNIH4-204ENST00000366860 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
CNIH4-204ENST00000366860 NLRP1Q9C000 1473 aa22.75■■□□□ 1.23
CNIH4-204ENST00000366860 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
CNIH4-204ENST00000366860 ADGRB3O60242 1522 aa22.74■■□□□ 1.23
CNIH4-204ENST00000366860 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
CNIH4-204ENST00000366860 SLC52A1Q9NWF4 448 aa22.72■■□□□ 1.23
CNIH4-204ENST00000366860 FBXO31Q5XUX0 539 aaPredicted RBP22.7■■□□□ 1.22
CNIH4-204ENST00000366860 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
CNIH4-204ENST00000366860 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
CNIH4-204ENST00000366860 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
CNIH4-204ENST00000366860 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
CNIH4-204ENST00000366860 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
CNIH4-204ENST00000366860 SPATA31E1Q6ZUB1 1445 aa22.66■■□□□ 1.22
CNIH4-204ENST00000366860 TONSLQ96HA7 1378 aa22.66■■□□□ 1.22
CNIH4-204ENST00000366860 IFT172Q9UG01 1749 aa22.65■■□□□ 1.22
CNIH4-204ENST00000366860 A2ML1A8K2U0 1454 aa22.65■■□□□ 1.22
CNIH4-204ENST00000366860 KDM4FA0A1W2PPD8 638 aa22.64■■□□□ 1.21
CNIH4-204ENST00000366860 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
CNIH4-204ENST00000366860 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
CNIH4-204ENST00000366860 TIMELESSQ9UNS1 1208 aa22.63■■□□□ 1.21
CNIH4-204ENST00000366860 PPLO60437 1756 aa22.62■■□□□ 1.21
CNIH4-204ENST00000366860 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
CNIH4-204ENST00000366860 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
CNIH4-204ENST00000366860 IDI1Q13907 227 aa22.6■■□□□ 1.21
CNIH4-204ENST00000366860 MSH5O43196 834 aa22.57■■□□□ 1.2
CNIH4-204ENST00000366860 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
CNIH4-204ENST00000366860 NEXMIFQ5QGS0 1516 aa22.57■■□□□ 1.2
CNIH4-204ENST00000366860 MYOM2P54296 1465 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms