RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
CNIH4-202ENST00000366857 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
CNIH4-202ENST00000366857 ANKRD50Q9ULJ7 1429 aa14.01□□□□□ -0.17
CNIH4-202ENST00000366857 MYO3AQ8NEV4 1616 aa14□□□□□ -0.17
CNIH4-202ENST00000366857 CDK11AQ9UQ88 783 aaPredicted RBP13.99□□□□□ -0.17
CNIH4-202ENST00000366857 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
CNIH4-202ENST00000366857 NRXN1Q9ULB1 1477 aa13.98□□□□□ -0.17
CNIH4-202ENST00000366857 PLEKHD1A6NEE1 506 aa13.97□□□□□ -0.17
CNIH4-202ENST00000366857 KDM5AP29375 1690 aaKnown RBP13.97□□□□□ -0.17
CNIH4-202ENST00000366857 SYNMO15061 1565 aa13.96□□□□□ -0.17
CNIH4-202ENST00000366857 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.18
CNIH4-202ENST00000366857 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
CNIH4-202ENST00000366857 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
CNIH4-202ENST00000366857 AGLP35573 1532 aa13.94□□□□□ -0.18
CNIH4-202ENST00000366857 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
CNIH4-202ENST00000366857 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
CNIH4-202ENST00000366857 KIF1BO60333 1816 aa13.93□□□□□ -0.18
CNIH4-202ENST00000366857 KIF15Q9NS87 1388 aa13.93□□□□□ -0.18
CNIH4-202ENST00000366857 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
CNIH4-202ENST00000366857 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
CNIH4-202ENST00000366857 MYOM1P52179 1685 aa13.92□□□□□ -0.18
CNIH4-202ENST00000366857 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
CNIH4-202ENST00000366857 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
CNIH4-202ENST00000366857 ARHGEF40Q8TER5 1519 aa13.91□□□□□ -0.18
CNIH4-202ENST00000366857 ABCC3O15438 1527 aa13.9□□□□□ -0.18
CNIH4-202ENST00000366857 RALGAPBQ86X10 1494 aa13.89□□□□□ -0.19
CNIH4-202ENST00000366857 MPHOSPH9Q99550 1183 aa13.89□□□□□ -0.19
CNIH4-202ENST00000366857 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
CNIH4-202ENST00000366857 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
CNIH4-202ENST00000366857 A2MP01023 1474 aa13.87□□□□□ -0.19
CNIH4-202ENST00000366857 TMEM131LA2VDJ0 1609 aa13.87□□□□□ -0.19
CNIH4-202ENST00000366857 COL17A1Q9UMD9 1497 aaPredicted RBP13.86□□□□□ -0.19
CNIH4-202ENST00000366857 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
CNIH4-202ENST00000366857 CD109Q6YHK3 1445 aa13.85□□□□□ -0.19
CNIH4-202ENST00000366857 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
CNIH4-202ENST00000366857 DHX29Q7Z478 1369 aaKnown RBP13.84□□□□□ -0.19
CNIH4-202ENST00000366857 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
CNIH4-202ENST00000366857 ARHGAP31Q2M1Z3 1444 aa13.84□□□□□ -0.19
CNIH4-202ENST00000366857 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
CNIH4-202ENST00000366857 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
CNIH4-202ENST00000366857 RRP7BPQ9NSQ0 103 aa13.82□□□□□ -0.2
CNIH4-202ENST00000366857 MYOM2P54296 1465 aa13.82□□□□□ -0.2
CNIH4-202ENST00000366857 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
CNIH4-202ENST00000366857 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
CNIH4-202ENST00000366857 NRXN3Q9Y4C0 1643 aa13.81□□□□□ -0.2
CNIH4-202ENST00000366857 NOS1P29475 1434 aa13.81□□□□□ -0.2
CNIH4-202ENST00000366857 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
CNIH4-202ENST00000366857 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
CNIH4-202ENST00000366857 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
CNIH4-202ENST00000366857 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
CNIH4-202ENST00000366857 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
CNIH4-202ENST00000366857 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
CNIH4-202ENST00000366857 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
CNIH4-202ENST00000366857 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
CNIH4-202ENST00000366857 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
CNIH4-202ENST00000366857 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
CNIH4-202ENST00000366857 YEATS2Q9ULM3 1422 aa13.74□□□□□ -0.21
CNIH4-202ENST00000366857 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
CNIH4-202ENST00000366857 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
CNIH4-202ENST00000366857 ITGAEP38570 1179 aa13.73□□□□□ -0.21
CNIH4-202ENST00000366857 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
CNIH4-202ENST00000366857 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
CNIH4-202ENST00000366857 UBR1Q8IWV7 1749 aa13.72□□□□□ -0.21
CNIH4-202ENST00000366857 NPATQ14207 1427 aa13.72□□□□□ -0.21
CNIH4-202ENST00000366857 C3P01024 1663 aa13.7□□□□□ -0.22
CNIH4-202ENST00000366857 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
CNIH4-202ENST00000366857 NUP155O75694 1391 aa13.68□□□□□ -0.22
CNIH4-202ENST00000366857 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
CNIH4-202ENST00000366857 ZNF142P52746 1687 aaPredicted RBP13.67□□□□□ -0.22
CNIH4-202ENST00000366857 FOXD1Q16676 465 aa13.66□□□□□ -0.22
CNIH4-202ENST00000366857 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
CNIH4-202ENST00000366857 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
CNIH4-202ENST00000366857 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
CNIH4-202ENST00000366857 PIK3C2GO75747 1445 aa13.63□□□□□ -0.23
CNIH4-202ENST00000366857 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
CNIH4-202ENST00000366857 RIMS1Q86UR5 1692 aaKnown RBP13.62□□□□□ -0.23
CNIH4-202ENST00000366857 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
CNIH4-202ENST00000366857 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
CNIH4-202ENST00000366857 PKD2Q13563 968 aa13.61□□□□□ -0.23
CNIH4-202ENST00000366857 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
CNIH4-202ENST00000366857 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
CNIH4-202ENST00000366857 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
CNIH4-202ENST00000366857 TSPY4P0CV99 314 aa13.58□□□□□ -0.23
CNIH4-202ENST00000366857 TSPY10P0CW01 314 aa13.58□□□□□ -0.23
CNIH4-202ENST00000366857 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
CNIH4-202ENST00000366857 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
CNIH4-202ENST00000366857 WASHC2AQ641Q2 1341 aa13.58□□□□□ -0.24
CNIH4-202ENST00000366857 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
CNIH4-202ENST00000366857 TOPAZ1Q8N9V7 1692 aa13.57□□□□□ -0.24
CNIH4-202ENST00000366857 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
CNIH4-202ENST00000366857 PTPRMP28827 1452 aa13.56□□□□□ -0.24
CNIH4-202ENST00000366857 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
CNIH4-202ENST00000366857 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
CNIH4-202ENST00000366857 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
CNIH4-202ENST00000366857 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
CNIH4-202ENST00000366857 DIEXFQ68CQ4 756 aaKnown RBP13.52□□□□□ -0.25
CNIH4-202ENST00000366857 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
CNIH4-202ENST00000366857 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
CNIH4-202ENST00000366857 MED14O60244 1454 aa13.51□□□□□ -0.25
CNIH4-202ENST00000366857 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms