RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 FER1L4A9Z1Z3 1794 aa15.76■□□□□ 0.11
H3F3A-202ENST00000366814 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
H3F3A-202ENST00000366814 REREQ9P2R6 1566 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 ESF1Q9H501 851 aaKnown RBP15.74■□□□□ 0.11
H3F3A-202ENST00000366814 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 DAPK1P53355 1430 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
H3F3A-202ENST00000366814 ROCK1Q13464 1354 aa15.73■□□□□ 0.11
H3F3A-202ENST00000366814 CHIC2Q9UKJ5 165 aa15.71■□□□□ 0.11
H3F3A-202ENST00000366814 AGLP35573 1532 aa15.71■□□□□ 0.11
H3F3A-202ENST00000366814 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
H3F3A-202ENST00000366814 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
H3F3A-202ENST00000366814 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
H3F3A-202ENST00000366814 RRP7BPQ9NSQ0 103 aa15.71■□□□□ 0.11
H3F3A-202ENST00000366814 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
H3F3A-202ENST00000366814 A2MP01023 1474 aa15.69■□□□□ 0.1
H3F3A-202ENST00000366814 CEBPAP49715 358 aaPredicted RBP15.69■□□□□ 0.1
H3F3A-202ENST00000366814 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
H3F3A-202ENST00000366814 ABCC5O15440 1437 aa15.69■□□□□ 0.1
H3F3A-202ENST00000366814 ADGBQ8N7X0 1667 aa15.68■□□□□ 0.1
H3F3A-202ENST00000366814 NEUROD1Q13562 356 aa15.66■□□□□ 0.1
H3F3A-202ENST00000366814 GGT6Q6P531 493 aa15.66■□□□□ 0.1
H3F3A-202ENST00000366814 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
H3F3A-202ENST00000366814 CROCC2H7BZ55 1655 aa15.65■□□□□ 0.1
H3F3A-202ENST00000366814 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
H3F3A-202ENST00000366814 TRIM52Q96A61 297 aa15.64■□□□□ 0.09
H3F3A-202ENST00000366814 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
H3F3A-202ENST00000366814 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
H3F3A-202ENST00000366814 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
H3F3A-202ENST00000366814 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
H3F3A-202ENST00000366814 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
H3F3A-202ENST00000366814 CNTLNQ9NXG0 1405 aa15.62■□□□□ 0.09
H3F3A-202ENST00000366814 KIF3BO15066 747 aa15.61■□□□□ 0.09
H3F3A-202ENST00000366814 ADGRL2O95490 1459 aa15.61■□□□□ 0.09
H3F3A-202ENST00000366814 C3P01024 1663 aa15.6■□□□□ 0.09
H3F3A-202ENST00000366814 LMTK3Q96Q04 1460 aa15.6■□□□□ 0.09
H3F3A-202ENST00000366814 SHANK2Q9UPX8 1470 aa15.6■□□□□ 0.09
H3F3A-202ENST00000366814 HSPA2P54652 639 aa15.6■□□□□ 0.09
H3F3A-202ENST00000366814 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
H3F3A-202ENST00000366814 NCOA1Q15788 1441 aa15.58■□□□□ 0.08
H3F3A-202ENST00000366814 CLTCQ00610 1675 aaKnown RBP15.57■□□□□ 0.08
H3F3A-202ENST00000366814 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
H3F3A-202ENST00000366814 MAST1Q9Y2H9 1570 aa15.57■□□□□ 0.08
H3F3A-202ENST00000366814 PREX1Q8TCU6 1659 aa15.56■□□□□ 0.08
H3F3A-202ENST00000366814 MPHOSPH9Q99550 1183 aa15.56■□□□□ 0.08
H3F3A-202ENST00000366814 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
H3F3A-202ENST00000366814 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
H3F3A-202ENST00000366814 UHRF1BP1Q6BDS2 1440 aa15.54■□□□□ 0.08
H3F3A-202ENST00000366814 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
H3F3A-202ENST00000366814 NPATQ14207 1427 aa15.5■□□□□ 0.07
H3F3A-202ENST00000366814 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
H3F3A-202ENST00000366814 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
H3F3A-202ENST00000366814 DUOX2Q9NRD8 1548 aa15.49■□□□□ 0.07
H3F3A-202ENST00000366814 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
H3F3A-202ENST00000366814 EIF2AK4Q9P2K8 1649 aaKnown RBP15.47■□□□□ 0.07
H3F3A-202ENST00000366814 FBXO31Q5XUX0 539 aaPredicted RBP15.45■□□□□ 0.06
H3F3A-202ENST00000366814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
H3F3A-202ENST00000366814 FAM135AQ9P2D6 1515 aa15.45■□□□□ 0.06
H3F3A-202ENST00000366814 RNF17Q9BXT8 1623 aaKnown RBP15.45■□□□□ 0.06
H3F3A-202ENST00000366814 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
H3F3A-202ENST00000366814 MIER1Q8N108 512 aa15.44■□□□□ 0.06
H3F3A-202ENST00000366814 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
H3F3A-202ENST00000366814 PZPP20742 1482 aa15.44■□□□□ 0.06
H3F3A-202ENST00000366814 CFAP65Q6ZU64 1925 aaKnown RBP15.43■□□□□ 0.06
H3F3A-202ENST00000366814 RPRD2Q5VT52 1461 aaKnown RBP15.43■□□□□ 0.06
H3F3A-202ENST00000366814 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
H3F3A-202ENST00000366814 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
H3F3A-202ENST00000366814 TNRQ92752 1358 aa15.4■□□□□ 0.06
H3F3A-202ENST00000366814 MYO3AQ8NEV4 1616 aa15.4■□□□□ 0.06
H3F3A-202ENST00000366814 CEP152O94986 1710 aa15.4■□□□□ 0.06
H3F3A-202ENST00000366814 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
H3F3A-202ENST00000366814 ABCC3O15438 1527 aa15.4■□□□□ 0.06
H3F3A-202ENST00000366814 NUP155O75694 1391 aa15.39■□□□□ 0.05
H3F3A-202ENST00000366814 KANK1Q14678 1352 aa15.39■□□□□ 0.05
H3F3A-202ENST00000366814 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
H3F3A-202ENST00000366814 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
H3F3A-202ENST00000366814 CEP170BQ9Y4F5 1589 aaPredicted RBP15.37■□□□□ 0.05
H3F3A-202ENST00000366814 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
H3F3A-202ENST00000366814 PKD2Q13563 968 aa15.36■□□□□ 0.05
H3F3A-202ENST00000366814 A2ML1A8K2U0 1454 aa15.36■□□□□ 0.05
H3F3A-202ENST00000366814 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
H3F3A-202ENST00000366814 PRDM15P57071 1507 aaPredicted RBP15.35■□□□□ 0.05
H3F3A-202ENST00000366814 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
H3F3A-202ENST00000366814 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
H3F3A-202ENST00000366814 L3MBTL2Q969R5 705 aa15.34■□□□□ 0.05
H3F3A-202ENST00000366814 PTPRTO14522 1441 aa15.33■□□□□ 0.04
H3F3A-202ENST00000366814 UNC13BO14795 1591 aa15.33■□□□□ 0.04
H3F3A-202ENST00000366814 THEMISQ8N1K5 641 aaPredicted RBP15.32■□□□□ 0.04
H3F3A-202ENST00000366814 NLRP1Q9C000 1473 aa15.32■□□□□ 0.04
H3F3A-202ENST00000366814 ERVK-7P63135 1459 aa15.31■□□□□ 0.04
H3F3A-202ENST00000366814 SPATA31D1Q6ZQQ2 1576 aa15.3■□□□□ 0.04
H3F3A-202ENST00000366814 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
H3F3A-202ENST00000366814 PLA2R1Q13018 1463 aa15.3■□□□□ 0.04
H3F3A-202ENST00000366814 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
H3F3A-202ENST00000366814 CERKQ8TCT0 537 aa15.29■□□□□ 0.04
H3F3A-202ENST00000366814 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
H3F3A-202ENST00000366814 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms