RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 TNRQ92752 1358 aa18.46■□□□□ 0.55
MRPL55-212ENST00000366739 KIF3BO15066 747 aa18.46■□□□□ 0.55
MRPL55-212ENST00000366739 NEURL4Q96JN8 1562 aa18.44■□□□□ 0.54
MRPL55-212ENST00000366739 PZPP20742 1482 aa18.43■□□□□ 0.54
MRPL55-212ENST00000366739 CCDC141Q6ZP82 1450 aa18.43■□□□□ 0.54
MRPL55-212ENST00000366739 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
MRPL55-212ENST00000366739 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
MRPL55-212ENST00000366739 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
MRPL55-212ENST00000366739 HSPA1LP34931 641 aa18.41■□□□□ 0.54
MRPL55-212ENST00000366739 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
MRPL55-212ENST00000366739 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-212ENST00000366739 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
MRPL55-212ENST00000366739 CPS1P31327 1500 aa18.4■□□□□ 0.54
MRPL55-212ENST00000366739 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
MRPL55-212ENST00000366739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
MRPL55-212ENST00000366739 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
MRPL55-212ENST00000366739 FAM135AQ9P2D6 1515 aa18.39■□□□□ 0.54
MRPL55-212ENST00000366739 TOM1O60784 492 aa18.37■□□□□ 0.53
MRPL55-212ENST00000366739 ANKLE2Q86XL3 938 aa18.37■□□□□ 0.53
MRPL55-212ENST00000366739 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
MRPL55-212ENST00000366739 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
MRPL55-212ENST00000366739 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
MRPL55-212ENST00000366739 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
MRPL55-212ENST00000366739 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-212ENST00000366739 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
MRPL55-212ENST00000366739 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
MRPL55-212ENST00000366739 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
MRPL55-212ENST00000366739 ARHGEF5Q12774 1597 aa18.33■□□□□ 0.52
MRPL55-212ENST00000366739 MED14O60244 1454 aa18.32■□□□□ 0.52
MRPL55-212ENST00000366739 TSPY4P0CV99 314 aa18.31■□□□□ 0.52
MRPL55-212ENST00000366739 TSPY10P0CW01 314 aa18.31■□□□□ 0.52
MRPL55-212ENST00000366739 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
MRPL55-212ENST00000366739 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
MRPL55-212ENST00000366739 ABCC3O15438 1527 aa18.28■□□□□ 0.52
MRPL55-212ENST00000366739 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
MRPL55-212ENST00000366739 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
MRPL55-212ENST00000366739 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
MRPL55-212ENST00000366739 LRRC9Q6ZRR7 1453 aa18.24■□□□□ 0.51
MRPL55-212ENST00000366739 MAST1Q9Y2H9 1570 aa18.24■□□□□ 0.51
MRPL55-212ENST00000366739 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
MRPL55-212ENST00000366739 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
MRPL55-212ENST00000366739 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
MRPL55-212ENST00000366739 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-212ENST00000366739 MROH1Q8NDA8 1641 aa18.23■□□□□ 0.51
MRPL55-212ENST00000366739 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
MRPL55-212ENST00000366739 EIF2AK4Q9P2K8 1649 aaKnown RBP18.2■□□□□ 0.5
MRPL55-212ENST00000366739 SYNMO15061 1565 aa18.19■□□□□ 0.5
MRPL55-212ENST00000366739 VPS8Q8N3P4 1428 aa18.19■□□□□ 0.5
MRPL55-212ENST00000366739 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
MRPL55-212ENST00000366739 CEP152O94986 1710 aa18.18■□□□□ 0.5
MRPL55-212ENST00000366739 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
MRPL55-212ENST00000366739 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
MRPL55-212ENST00000366739 LTKP29376 864 aa18.16■□□□□ 0.5
MRPL55-212ENST00000366739 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
MRPL55-212ENST00000366739 DUOX2Q9NRD8 1548 aa18.15■□□□□ 0.5
MRPL55-212ENST00000366739 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
MRPL55-212ENST00000366739 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
MRPL55-212ENST00000366739 CFAP65Q6ZU64 1925 aaKnown RBP18.13■□□□□ 0.49
MRPL55-212ENST00000366739 SLIT1O75093 1534 aa18.13■□□□□ 0.49
MRPL55-212ENST00000366739 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
MRPL55-212ENST00000366739 ARHGAP31Q2M1Z3 1444 aa18.11■□□□□ 0.49
MRPL55-212ENST00000366739 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
MRPL55-212ENST00000366739 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
MRPL55-212ENST00000366739 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
MRPL55-212ENST00000366739 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
MRPL55-212ENST00000366739 ABCC5O15440 1437 aa18.08■□□□□ 0.49
MRPL55-212ENST00000366739 ERBINQ96RT1 1412 aa18.08■□□□□ 0.49
MRPL55-212ENST00000366739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
MRPL55-212ENST00000366739 EID1Q9Y6B2 187 aa18.08■□□□□ 0.48
MRPL55-212ENST00000366739 PIK3C2BO00750 1634 aa18.07■□□□□ 0.48
MRPL55-212ENST00000366739 XIRP1Q702N8 1843 aaKnown RBP18.07■□□□□ 0.48
MRPL55-212ENST00000366739 TMEM2Q9UHN6 1383 aa18.06■□□□□ 0.48
MRPL55-212ENST00000366739 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
MRPL55-212ENST00000366739 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
MRPL55-212ENST00000366739 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
MRPL55-212ENST00000366739 KANK1Q14678 1352 aa18.03■□□□□ 0.48
MRPL55-212ENST00000366739 PTPN23Q9H3S7 1636 aa18.02■□□□□ 0.48
MRPL55-212ENST00000366739 DAPK1P53355 1430 aa18.02■□□□□ 0.48
MRPL55-212ENST00000366739 FAM135BQ49AJ0 1406 aa18.02■□□□□ 0.48
MRPL55-212ENST00000366739 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
MRPL55-212ENST00000366739 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
MRPL55-212ENST00000366739 IDI1Q13907 227 aa18.01■□□□□ 0.47
MRPL55-212ENST00000366739 KCNA6P17658 529 aa17.99■□□□□ 0.47
MRPL55-212ENST00000366739 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
MRPL55-212ENST00000366739 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
MRPL55-212ENST00000366739 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
MRPL55-212ENST00000366739 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
MRPL55-212ENST00000366739 TET3O43151 1660 aa17.97■□□□□ 0.47
MRPL55-212ENST00000366739 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
MRPL55-212ENST00000366739 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
MRPL55-212ENST00000366739 ANKRD30AQ9BXX3 1397 aa17.96■□□□□ 0.47
MRPL55-212ENST00000366739 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-212ENST00000366739 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
MRPL55-212ENST00000366739 NOS1P29475 1434 aa17.95■□□□□ 0.46
MRPL55-212ENST00000366739 ADGRB3O60242 1522 aa17.94■□□□□ 0.46
MRPL55-212ENST00000366739 ROBO1Q9Y6N7 1651 aa17.94■□□□□ 0.46
MRPL55-212ENST00000366739 APLP2Q06481 763 aa17.93■□□□□ 0.46
MRPL55-212ENST00000366739 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
MRPL55-212ENST00000366739 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
MRPL55-212ENST00000366739 BCANQ96GW7 911 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms