RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 ESF1Q9H501 851 aaKnown RBP13.59□□□□□ -0.23
MSL3-203ENST00000361672 PTPRKQ15262 1439 aa13.58□□□□□ -0.23
MSL3-203ENST00000361672 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
MSL3-203ENST00000361672 PLPPR3Q6T4P5 718 aa13.57□□□□□ -0.24
MSL3-203ENST00000361672 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
MSL3-203ENST00000361672 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
MSL3-203ENST00000361672 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSL3-203ENST00000361672 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
MSL3-203ENST00000361672 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
MSL3-203ENST00000361672 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
MSL3-203ENST00000361672 CROCC2H7BZ55 1655 aa13.54□□□□□ -0.24
MSL3-203ENST00000361672 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
MSL3-203ENST00000361672 PZPP20742 1482 aa13.54□□□□□ -0.24
MSL3-203ENST00000361672 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
MSL3-203ENST00000361672 ZNF777Q9ULD5 760 aaPredicted RBP13.54□□□□□ -0.24
MSL3-203ENST00000361672 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
MSL3-203ENST00000361672 TOM1O60784 492 aa13.51□□□□□ -0.25
MSL3-203ENST00000361672 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
MSL3-203ENST00000361672 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
MSL3-203ENST00000361672 HSPA1LP34931 641 aa13.5□□□□□ -0.25
MSL3-203ENST00000361672 SYNMO15061 1565 aa13.5□□□□□ -0.25
MSL3-203ENST00000361672 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
MSL3-203ENST00000361672 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
MSL3-203ENST00000361672 DEPDC5O75140 1603 aa13.49□□□□□ -0.25
MSL3-203ENST00000361672 DUOX2Q9NRD8 1548 aa13.49□□□□□ -0.25
MSL3-203ENST00000361672 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
MSL3-203ENST00000361672 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
MSL3-203ENST00000361672 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
MSL3-203ENST00000361672 ABCC3O15438 1527 aa13.46□□□□□ -0.26
MSL3-203ENST00000361672 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.26
MSL3-203ENST00000361672 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.26
MSL3-203ENST00000361672 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
MSL3-203ENST00000361672 ERBINQ96RT1 1412 aa13.45□□□□□ -0.26
MSL3-203ENST00000361672 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
MSL3-203ENST00000361672 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
MSL3-203ENST00000361672 TNRQ92752 1358 aa13.44□□□□□ -0.26
MSL3-203ENST00000361672 MED14O60244 1454 aa13.43□□□□□ -0.26
MSL3-203ENST00000361672 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
MSL3-203ENST00000361672 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
MSL3-203ENST00000361672 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
MSL3-203ENST00000361672 NCKAP5LQ9HCH0 1330 aa13.43□□□□□ -0.26
MSL3-203ENST00000361672 LMTK2Q8IWU2 1503 aa13.42□□□□□ -0.26
MSL3-203ENST00000361672 GGT6Q6P531 493 aa13.4□□□□□ -0.26
MSL3-203ENST00000361672 ERVK-7P63135 1459 aa13.4□□□□□ -0.27
MSL3-203ENST00000361672 CEP152O94986 1710 aa13.39□□□□□ -0.27
MSL3-203ENST00000361672 ADGRL2O95490 1459 aa13.39□□□□□ -0.27
MSL3-203ENST00000361672 KIF3BO15066 747 aa13.38□□□□□ -0.27
MSL3-203ENST00000361672 UGGT1Q9NYU2 1555 aa13.37□□□□□ -0.27
MSL3-203ENST00000361672 ABCC5O15440 1437 aa13.37□□□□□ -0.27
MSL3-203ENST00000361672 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
MSL3-203ENST00000361672 DAPK1P53355 1430 aa13.37□□□□□ -0.27
MSL3-203ENST00000361672 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
MSL3-203ENST00000361672 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
MSL3-203ENST00000361672 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
MSL3-203ENST00000361672 SLIT1O75093 1534 aa13.35□□□□□ -0.27
MSL3-203ENST00000361672 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
MSL3-203ENST00000361672 ARHGAP23Q9P227 1491 aa13.34□□□□□ -0.27
MSL3-203ENST00000361672 KIF15Q9NS87 1388 aa13.33□□□□□ -0.28
MSL3-203ENST00000361672 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
MSL3-203ENST00000361672 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
MSL3-203ENST00000361672 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
MSL3-203ENST00000361672 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
MSL3-203ENST00000361672 APLP2Q06481 763 aa13.31□□□□□ -0.28
MSL3-203ENST00000361672 ANKRD30AQ9BXX3 1397 aa13.31□□□□□ -0.28
MSL3-203ENST00000361672 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
MSL3-203ENST00000361672 LRRC7Q96NW7 1537 aa13.3□□□□□ -0.28
MSL3-203ENST00000361672 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
MSL3-203ENST00000361672 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
MSL3-203ENST00000361672 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
MSL3-203ENST00000361672 KANK1Q14678 1352 aa13.29□□□□□ -0.28
MSL3-203ENST00000361672 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
MSL3-203ENST00000361672 ANKLE2Q86XL3 938 aa13.29□□□□□ -0.28
MSL3-203ENST00000361672 UNC13BO14795 1591 aa13.28□□□□□ -0.28
MSL3-203ENST00000361672 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
MSL3-203ENST00000361672 TET3O43151 1660 aa13.27□□□□□ -0.28
MSL3-203ENST00000361672 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
MSL3-203ENST00000361672 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
MSL3-203ENST00000361672 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
MSL3-203ENST00000361672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
MSL3-203ENST00000361672 NOS1P29475 1434 aa13.26□□□□□ -0.29
MSL3-203ENST00000361672 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
MSL3-203ENST00000361672 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
MSL3-203ENST00000361672 ADGRB3O60242 1522 aa13.25□□□□□ -0.29
MSL3-203ENST00000361672 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
MSL3-203ENST00000361672 ROCK1Q13464 1354 aa13.24□□□□□ -0.29
MSL3-203ENST00000361672 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
MSL3-203ENST00000361672 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
MSL3-203ENST00000361672 CDK12Q9NYV4 1490 aaPredicted RBP13.2□□□□□ -0.3
MSL3-203ENST00000361672 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
MSL3-203ENST00000361672 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
MSL3-203ENST00000361672 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
MSL3-203ENST00000361672 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
MSL3-203ENST00000361672 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
MSL3-203ENST00000361672 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
MSL3-203ENST00000361672 RRP7BPQ9NSQ0 103 aa13.16□□□□□ -0.3
MSL3-203ENST00000361672 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
MSL3-203ENST00000361672 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
MSL3-203ENST00000361672 E9PCH4 1651 aa13.14□□□□□ -0.31
MSL3-203ENST00000361672 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
MSL3-203ENST00000361672 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms