RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 PDE4AP27815 886 aa17.91■□□□□ 0.46
PPARGC1B-202ENST00000360453 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
PPARGC1B-202ENST00000360453 RALGAPBQ86X10 1494 aa17.91■□□□□ 0.46
PPARGC1B-202ENST00000360453 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
PPARGC1B-202ENST00000360453 PANK3Q9H999 370 aa17.9■□□□□ 0.46
PPARGC1B-202ENST00000360453 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
PPARGC1B-202ENST00000360453 C20orf194Q5TEA3 1177 aa17.89■□□□□ 0.45
PPARGC1B-202ENST00000360453 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
PPARGC1B-202ENST00000360453 KTN1Q86UP2 1357 aaKnown RBP17.88■□□□□ 0.45
PPARGC1B-202ENST00000360453 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
PPARGC1B-202ENST00000360453 RTN4Q9NQC3 1192 aaKnown RBP17.88■□□□□ 0.45
PPARGC1B-202ENST00000360453 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
PPARGC1B-202ENST00000360453 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
PPARGC1B-202ENST00000360453 ADGRL2O95490 1459 aa17.86■□□□□ 0.45
PPARGC1B-202ENST00000360453 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
PPARGC1B-202ENST00000360453 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
PPARGC1B-202ENST00000360453 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
PPARGC1B-202ENST00000360453 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
PPARGC1B-202ENST00000360453 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
PPARGC1B-202ENST00000360453 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
PPARGC1B-202ENST00000360453 NEFMP07197 916 aa17.84■□□□□ 0.45
PPARGC1B-202ENST00000360453 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
PPARGC1B-202ENST00000360453 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
PPARGC1B-202ENST00000360453 ATP10BO94823 1461 aa17.82■□□□□ 0.44
PPARGC1B-202ENST00000360453 BACH2Q9BYV9 841 aa17.82■□□□□ 0.44
PPARGC1B-202ENST00000360453 ADAMTS8Q9UP79 889 aa17.82■□□□□ 0.44
PPARGC1B-202ENST00000360453 IL27Q8NEV9 243 aa17.81■□□□□ 0.44
PPARGC1B-202ENST00000360453 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
PPARGC1B-202ENST00000360453 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
PPARGC1B-202ENST00000360453 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
PPARGC1B-202ENST00000360453 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
PPARGC1B-202ENST00000360453 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
PPARGC1B-202ENST00000360453 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
PPARGC1B-202ENST00000360453 TESK2Q96S53 571 aa17.79■□□□□ 0.44
PPARGC1B-202ENST00000360453 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
PPARGC1B-202ENST00000360453 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
PPARGC1B-202ENST00000360453 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.43
PPARGC1B-202ENST00000360453 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.43
PPARGC1B-202ENST00000360453 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
PPARGC1B-202ENST00000360453 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
PPARGC1B-202ENST00000360453 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
PPARGC1B-202ENST00000360453 RGS3P49796 1198 aa17.74■□□□□ 0.43
PPARGC1B-202ENST00000360453 PDE3BQ13370 1112 aa17.73■□□□□ 0.43
PPARGC1B-202ENST00000360453 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
PPARGC1B-202ENST00000360453 TMF1P82094 1093 aa17.72■□□□□ 0.43
PPARGC1B-202ENST00000360453 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
PPARGC1B-202ENST00000360453 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
PPARGC1B-202ENST00000360453 A2MP01023 1474 aa17.71■□□□□ 0.43
PPARGC1B-202ENST00000360453 WDR43Q15061 677 aaKnown RBP eCLIP17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
PPARGC1B-202ENST00000360453 PTPRGP23470 1445 aa17.68■□□□□ 0.42
PPARGC1B-202ENST00000360453 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
PPARGC1B-202ENST00000360453 E9PCH4 1651 aa17.67■□□□□ 0.42
PPARGC1B-202ENST00000360453 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
PPARGC1B-202ENST00000360453 ABCA8O94911 1581 aa17.66■□□□□ 0.42
PPARGC1B-202ENST00000360453 ANO8Q9HCE9 1232 aaPredicted RBP17.66■□□□□ 0.42
PPARGC1B-202ENST00000360453 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
PPARGC1B-202ENST00000360453 CCDC141Q6ZP82 1450 aa17.66■□□□□ 0.42
PPARGC1B-202ENST00000360453 MS4A1P11836 297 aa17.65■□□□□ 0.42
PPARGC1B-202ENST00000360453 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
PPARGC1B-202ENST00000360453 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
PPARGC1B-202ENST00000360453 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
PPARGC1B-202ENST00000360453 SAMD9LQ8IVG5 1584 aa17.65■□□□□ 0.42
PPARGC1B-202ENST00000360453 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
PPARGC1B-202ENST00000360453 BCAR3O75815 825 aa17.63■□□□□ 0.41
PPARGC1B-202ENST00000360453 NUP160Q12769 1436 aa17.63■□□□□ 0.41
PPARGC1B-202ENST00000360453 APAF1O14727 1248 aa17.62■□□□□ 0.41
PPARGC1B-202ENST00000360453 ARHGAP5Q13017 1502 aa17.62■□□□□ 0.41
PPARGC1B-202ENST00000360453 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
PPARGC1B-202ENST00000360453 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
PPARGC1B-202ENST00000360453 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
PPARGC1B-202ENST00000360453 BLMP54132 1417 aaPredicted RBP17.61■□□□□ 0.41
PPARGC1B-202ENST00000360453 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
PPARGC1B-202ENST00000360453 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
PPARGC1B-202ENST00000360453 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
PPARGC1B-202ENST00000360453 BRPF3Q9ULD4 1205 aa17.6■□□□□ 0.41
PPARGC1B-202ENST00000360453 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
PPARGC1B-202ENST00000360453 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
PPARGC1B-202ENST00000360453 NFKBIBQ15653 356 aa17.58■□□□□ 0.4
PPARGC1B-202ENST00000360453 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
PPARGC1B-202ENST00000360453 GPRASP1Q5JY77 1395 aa17.58■□□□□ 0.4
PPARGC1B-202ENST00000360453 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
PPARGC1B-202ENST00000360453 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
PPARGC1B-202ENST00000360453 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.57■□□□□ 0.4
PPARGC1B-202ENST00000360453 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
PPARGC1B-202ENST00000360453 C8orf34Q49A92 452 aa17.56■□□□□ 0.4
PPARGC1B-202ENST00000360453 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
PPARGC1B-202ENST00000360453 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
PPARGC1B-202ENST00000360453 ZMYM4Q5VZL5 1548 aa17.54■□□□□ 0.4
PPARGC1B-202ENST00000360453 PRDM15P57071 1507 aaPredicted RBP17.54■□□□□ 0.4
PPARGC1B-202ENST00000360453 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
PPARGC1B-202ENST00000360453 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
PPARGC1B-202ENST00000360453 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
PPARGC1B-202ENST00000360453 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
PPARGC1B-202ENST00000360453 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
PPARGC1B-202ENST00000360453 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms