RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
GTF3C2-202ENST00000359541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.386e-7■□□□□ 11.1
GTF3C2-202ENST00000359541 POLR1AO95602 1720 aaPredicted RBP12.65□□□□□ -0.38
GTF3C2-202ENST00000359541 MYO5CQ9NQX4 1742 aa12.65□□□□□ -0.38
GTF3C2-202ENST00000359541 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
GTF3C2-202ENST00000359541 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
GTF3C2-202ENST00000359541 TSHZ2Q9NRE2 1034 aa12.64□□□□□ -0.39
GTF3C2-202ENST00000359541 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
GTF3C2-202ENST00000359541 PLCH2O75038 1416 aa12.64□□□□□ -0.39
GTF3C2-202ENST00000359541 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
GTF3C2-202ENST00000359541 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
GTF3C2-202ENST00000359541 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
GTF3C2-202ENST00000359541 ERBINQ96RT1 1412 aa12.63□□□□□ -0.39
GTF3C2-202ENST00000359541 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
GTF3C2-202ENST00000359541 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
GTF3C2-202ENST00000359541 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
GTF3C2-202ENST00000359541 KDM5CP41229 1560 aa12.62□□□□□ -0.39
GTF3C2-202ENST00000359541 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
GTF3C2-202ENST00000359541 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
GTF3C2-202ENST00000359541 RALBP1Q15311 655 aa12.6□□□□□ -0.39
GTF3C2-202ENST00000359541 UNC13BO14795 1591 aa12.6□□□□□ -0.39
GTF3C2-202ENST00000359541 KANK1Q14678 1352 aa12.59□□□□□ -0.39
GTF3C2-202ENST00000359541 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
GTF3C2-202ENST00000359541 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 ERCC6L2Q5T890 1561 aa12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 ZCCHC11Q5TAX3 1644 aaKnown RBP12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 PRAG1Q86YV5 1406 aa12.57□□□□□ -0.4
GTF3C2-202ENST00000359541 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-202ENST00000359541 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
GTF3C2-202ENST00000359541 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
GTF3C2-202ENST00000359541 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-202ENST00000359541 TMF1P82094 1093 aa12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 PPP4R2Q9NY27 417 aa12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 ABCC1P33527 1531 aa12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 ARAP3Q8WWN8 1544 aa12.55□□□□□ -0.4
GTF3C2-202ENST00000359541 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-202ENST00000359541 ATP10AO60312 1499 aa12.53□□□□□ -0.4
GTF3C2-202ENST00000359541 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
GTF3C2-202ENST00000359541 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
GTF3C2-202ENST00000359541 GPRASP1Q5JY77 1395 aa12.52□□□□□ -0.4
GTF3C2-202ENST00000359541 IRX6P78412 446 aaPredicted RBP12.52□□□□□ -0.4
GTF3C2-202ENST00000359541 WDR7Q9Y4E6 1490 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 KCNA4P22459 653 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 WASHC2CQ9Y4E1 1318 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 TRAPPC8Q9Y2L5 1435 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 MAGI2Q86UL8 1455 aa12.52□□□□□ -0.41
GTF3C2-202ENST00000359541 A2MP01023 1474 aa12.51□□□□□ -0.41
GTF3C2-202ENST00000359541 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
GTF3C2-202ENST00000359541 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
GTF3C2-202ENST00000359541 PLA2R1Q13018 1463 aa12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 FANCAO15360 1455 aa12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-202ENST00000359541 LAMC1P11047 1609 aa12.48□□□□□ -0.41
GTF3C2-202ENST00000359541 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
GTF3C2-202ENST00000359541 KIF3BO15066 747 aa12.47□□□□□ -0.41
GTF3C2-202ENST00000359541 ADGRL1O94910 1474 aa12.47□□□□□ -0.41
GTF3C2-202ENST00000359541 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-202ENST00000359541 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.42
GTF3C2-202ENST00000359541 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
GTF3C2-202ENST00000359541 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-202ENST00000359541 ATP7AQ04656 1500 aa12.45□□□□□ -0.42
GTF3C2-202ENST00000359541 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
GTF3C2-202ENST00000359541 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
GTF3C2-202ENST00000359541 RBM19Q9Y4C8 960 aaKnown RBP12.44□□□□□ -0.42
GTF3C2-202ENST00000359541 TRPM2O94759 1503 aa12.43□□□□□ -0.42
GTF3C2-202ENST00000359541 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
GTF3C2-202ENST00000359541 PANK3Q9H999 370 aa12.43□□□□□ -0.42
GTF3C2-202ENST00000359541 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
GTF3C2-202ENST00000359541 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
GTF3C2-202ENST00000359541 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
GTF3C2-202ENST00000359541 TESK2Q96S53 571 aa12.41□□□□□ -0.42
GTF3C2-202ENST00000359541 LRPPRCP42704 1394 aaKnown RBP12.41□□□□□ -0.42
GTF3C2-202ENST00000359541 ABCA9Q8IUA7 1624 aa12.41□□□□□ -0.42
GTF3C2-202ENST00000359541 PTPRTO14522 1441 aa12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 CCDC136Q96JN2 1154 aa12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 DISP3Q9P2K9 1392 aa12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 TET3O43151 1660 aa12.4□□□□□ -0.42
GTF3C2-202ENST00000359541 E9PCH4 1651 aa12.39□□□□□ -0.43
GTF3C2-202ENST00000359541 ZNF518AQ6AHZ1 1483 aa12.39□□□□□ -0.43
GTF3C2-202ENST00000359541 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
GTF3C2-202ENST00000359541 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
GTF3C2-202ENST00000359541 INO80Q9ULG1 1556 aaPredicted RBP12.38□□□□□ -0.43
GTF3C2-202ENST00000359541 MSH5O43196 834 aa12.38□□□□□ -0.43
GTF3C2-202ENST00000359541 INSRP06213 1382 aa12.38□□□□□ -0.43
GTF3C2-202ENST00000359541 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
GTF3C2-202ENST00000359541 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
GTF3C2-202ENST00000359541 DEPDC5O75140 1603 aa12.36□□□□□ -0.43
GTF3C2-202ENST00000359541 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
GTF3C2-202ENST00000359541 CFAP74Q9C0B2 1584 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms