RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 HSP90AB3PQ58FF7 597 aa8.65□□□□□ -1.03
NF1-202ENST00000358273 CCAR2Q8N163 923 aaKnown RBP8.65□□□□□ -1.03
NF1-202ENST00000358273 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.03
NF1-202ENST00000358273 DNAJC2Q99543 621 aaKnown RBP8.65□□□□□ -1.03
NF1-202ENST00000358273 PLIN1O60240 522 aa8.64□□□□□ -1.03
NF1-202ENST00000358273 MYO10Q9HD67 2058 aa8.64□□□□□ -1.03
NF1-202ENST00000358273 TRAK2O60296 914 aa8.63□□□□□ -1.03
NF1-202ENST00000358273 ZRSR1Q15695 479 aaKnown RBP8.63□□□□□ -1.03
NF1-202ENST00000358273 FOXD4L6Q3SYB3 417 aaPredicted RBP8.63□□□□□ -1.03
NF1-202ENST00000358273 FOXD4L3Q6VB84 417 aaPredicted RBP8.63□□□□□ -1.03
NF1-202ENST00000358273 PLCD4Q9BRC7 762 aa8.63□□□□□ -1.03
NF1-202ENST00000358273 TEX35Q5T0J7 233 aa8.63□□□□□ -1.03
NF1-202ENST00000358273 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
NF1-202ENST00000358273 PHF14O94880 888 aa8.63□□□□□ -1.03
NF1-202ENST00000358273 CWC15Q9P013 229 aaKnown RBP8.63□□□□□ -1.03
NF1-202ENST00000358273 NCBP3Q53F19 620 aaKnown RBP8.62□□□□□ -1.03
NF1-202ENST00000358273 GTPBP4Q9BZE4 634 aaKnown RBP8.62□□□□□ -1.03
NF1-202ENST00000358273 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
NF1-202ENST00000358273 HMGN5P82970 282 aaKnown RBP8.62□□□□□ -1.03
NF1-202ENST00000358273 SASS6Q6UVJ0 657 aa8.62□□□□□ -1.03
NF1-202ENST00000358273 MAPK8IP3Q9UPT6 1336 aa8.62□□□□□ -1.03
NF1-202ENST00000358273 XRCC6P12956 609 aaKnown RBP eCLIP8.62□□□□□ -1.03
NF1-202ENST00000358273 ARID3CA6NKF2 412 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 CERS3Q8IU89 383 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 KIF3AQ9Y496 699 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 NOL8Q76FK4 1167 aaKnown RBP8.61□□□□□ -1.03
NF1-202ENST00000358273 NOC3LQ8WTT2 800 aaKnown RBP8.61□□□□□ -1.03
NF1-202ENST00000358273 PANK2Q9BZ23 570 aa8.61□□□□□ -1.03
NF1-202ENST00000358273 XPCQ01831 940 aaPredicted RBP8.61□□□□□ -1.03
NF1-202ENST00000358273 DMTNQ08495 405 aa8.6□□□□□ -1.03
NF1-202ENST00000358273 PDCL2Q8N4E4 241 aa8.6□□□□□ -1.03
NF1-202ENST00000358273 BAZ1AQ9NRL2 1556 aaPredicted RBP8.6□□□□□ -1.03
NF1-202ENST00000358273 KIF16BQ96L93 1317 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 ARHGAP35Q9NRY4 1499 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 WIZO95785 1651 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 TIGD1Q96MW7 591 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 CNPY4Q8N129 248 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
NF1-202ENST00000358273 AXDND1Q5T1B0 1012 aaPredicted RBP8.59□□□□□ -1.03
NF1-202ENST00000358273 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
NF1-202ENST00000358273 SENP3Q9H4L4 574 aaPredicted RBP8.59□□□□□ -1.03
NF1-202ENST00000358273 GPS2Q13227 327 aa8.58□□□□□ -1.04
NF1-202ENST00000358273 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
NF1-202ENST00000358273 ISY1Q9ULR0 285 aaKnown RBP8.58□□□□□ -1.04
NF1-202ENST00000358273 KIF21BO75037 1637 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 CENPJQ9HC77 1338 aaPredicted RBP8.57□□□□□ -1.04
NF1-202ENST00000358273 CHMP5Q9NZZ3 219 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 MYH10P35580 1976 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 NPHP1O15259 732 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
NF1-202ENST00000358273 SPDYE4A6NLX3 237 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 CCDC18Q5T9S5 1454 aa8.57□□□□□ -1.04
NF1-202ENST00000358273 VIRMAQ69YN4 1812 aaKnown RBP8.56□□□□□ -1.04
NF1-202ENST00000358273 NRDCO43847 1150 aa8.56□□□□□ -1.04
NF1-202ENST00000358273 KIF20AO95235 890 aa8.56□□□□□ -1.04
NF1-202ENST00000358273 OFD1O75665 1012 aa8.55□□□□□ -1.04
NF1-202ENST00000358273 HDAC5Q9UQL6 1122 aa8.55□□□□□ -1.04
NF1-202ENST00000358273 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
NF1-202ENST00000358273 TOMM22Q9NS69 142 aa8.55□□□□□ -1.04
NF1-202ENST00000358273 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
NF1-202ENST00000358273 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
NF1-202ENST00000358273 PDE3BQ13370 1112 aa8.54□□□□□ -1.04
NF1-202ENST00000358273 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
NF1-202ENST00000358273 MCM4P33991 863 aa8.54□□□□□ -1.04
NF1-202ENST00000358273 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
NF1-202ENST00000358273 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
NF1-202ENST00000358273 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 CLGNO14967 610 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 FHAD1B1AJZ9 1412 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 IGSF3O75054 1194 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 CAVIN1Q6NZI2 390 aaKnown RBP8.53□□□□□ -1.04
NF1-202ENST00000358273 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
NF1-202ENST00000358273 GTF2A1P52655 376 aaPredicted RBP8.53□□□□□ -1.04
NF1-202ENST00000358273 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
NF1-202ENST00000358273 STAC3Q96MF2 364 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 DEF6Q9H4E7 631 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 GOLGA6L4A6NEF3 574 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
NF1-202ENST00000358273 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
NF1-202ENST00000358273 CHIC2Q9UKJ5 165 aa8.52□□□□□ -1.05
NF1-202ENST00000358273 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
NF1-202ENST00000358273 OS9Q13438 667 aaPredicted RBP8.52□□□□□ -1.05
NF1-202ENST00000358273 APBB1O00213 710 aa8.52□□□□□ -1.05
NF1-202ENST00000358273 SRRTQ9BXP5 876 aaKnown RBP8.52□□□□□ -1.05
NF1-202ENST00000358273 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
NF1-202ENST00000358273 RRP7BPQ9NSQ0 103 aa8.52□□□□□ -1.05
NF1-202ENST00000358273 GORABQ5T7V8 394 aa8.52□□□□□ -1.05
NF1-202ENST00000358273 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
NF1-202ENST00000358273 KDM2AQ9Y2K7 1162 aa8.51□□□□□ -1.05
NF1-202ENST00000358273 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
NF1-202ENST00000358273 SKAP1Q86WV1 359 aa8.51□□□□□ -1.05
NF1-202ENST00000358273 HSP90B1P14625 803 aaKnown RBP8.51□□□□□ -1.05
NF1-202ENST00000358273 ZBTB9Q96C00 473 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms