RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
CD46-205ENST00000358170 RCAN3Q9UKA8 241 aa11.03□□□□□ -0.64
CD46-205ENST00000358170 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
CD46-205ENST00000358170 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
CD46-205ENST00000358170 TMF1P82094 1093 aa11.02□□□□□ -0.65
CD46-205ENST00000358170 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
CD46-205ENST00000358170 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
CD46-205ENST00000358170 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
CD46-205ENST00000358170 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
CD46-205ENST00000358170 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CD46-205ENST00000358170 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
CD46-205ENST00000358170 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
CD46-205ENST00000358170 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
CD46-205ENST00000358170 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
CD46-205ENST00000358170 KIF3BO15066 747 aa11□□□□□ -0.65
CD46-205ENST00000358170 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
CD46-205ENST00000358170 CCDC141Q6ZP82 1450 aa11□□□□□ -0.65
CD46-205ENST00000358170 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
CD46-205ENST00000358170 TNNT2P45379 298 aaPredicted RBP10.99□□□□□ -0.65
CD46-205ENST00000358170 MBD5Q9P267 1494 aa10.99□□□□□ -0.65
CD46-205ENST00000358170 CCDC146Q8IYE0 955 aa10.99□□□□□ -0.65
CD46-205ENST00000358170 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
CD46-205ENST00000358170 RRP1P56182 461 aaKnown RBP10.99□□□□□ -0.65
CD46-205ENST00000358170 RALGAPBQ86X10 1494 aa10.99□□□□□ -0.65
CD46-205ENST00000358170 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
CD46-205ENST00000358170 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
CD46-205ENST00000358170 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
CD46-205ENST00000358170 ADAMTS8Q9UP79 889 aa10.98□□□□□ -0.65
CD46-205ENST00000358170 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
CD46-205ENST00000358170 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
CD46-205ENST00000358170 TESK2Q96S53 571 aa10.97□□□□□ -0.65
CD46-205ENST00000358170 FAM135AQ9P2D6 1515 aa10.97□□□□□ -0.65
CD46-205ENST00000358170 BRD4O60885 1362 aaPredicted RBP10.97□□□□□ -0.65
CD46-205ENST00000358170 ABCA8O94911 1581 aa10.97□□□□□ -0.65
CD46-205ENST00000358170 NUTM2DQ5VT03 806 aaPredicted RBP10.96□□□□□ -0.65
CD46-205ENST00000358170 KDM5CP41229 1560 aa10.96□□□□□ -0.65
CD46-205ENST00000358170 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.66
CD46-205ENST00000358170 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
CD46-205ENST00000358170 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
CD46-205ENST00000358170 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
CD46-205ENST00000358170 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
CD46-205ENST00000358170 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
CD46-205ENST00000358170 CRBNQ96SW2 442 aa10.94□□□□□ -0.66
CD46-205ENST00000358170 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
CD46-205ENST00000358170 ERCC6L2Q5T890 1561 aa10.94□□□□□ -0.66
CD46-205ENST00000358170 PLA2R1Q13018 1463 aa10.93□□□□□ -0.66
CD46-205ENST00000358170 C20orf194Q5TEA3 1177 aa10.93□□□□□ -0.66
CD46-205ENST00000358170 GGT6Q6P531 493 aa10.93□□□□□ -0.66
CD46-205ENST00000358170 SAMD9LQ8IVG5 1584 aa10.93□□□□□ -0.66
CD46-205ENST00000358170 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
CD46-205ENST00000358170 A2MP01023 1474 aa10.92□□□□□ -0.66
CD46-205ENST00000358170 SHANK2Q9UPX8 1470 aa10.92□□□□□ -0.66
CD46-205ENST00000358170 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
CD46-205ENST00000358170 SAFB2Q14151 953 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■■□□□ 13.1
CD46-205ENST00000358170 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
CD46-205ENST00000358170 PPP2R1AP30153 589 aa10.9□□□□□ -0.66
CD46-205ENST00000358170 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.66
CD46-205ENST00000358170 CROCC2H7BZ55 1655 aa10.9□□□□□ -0.67
CD46-205ENST00000358170 BCL11AQ9H165 835 aa10.9□□□□□ -0.67
CD46-205ENST00000358170 TRAK1Q9UPV9 953 aa10.9□□□□□ -0.67
CD46-205ENST00000358170 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 APAF1O14727 1248 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 RNF123Q5XPI4 1314 aa10.89□□□□□ -0.67
CD46-205ENST00000358170 RGS3P49796 1198 aa10.88□□□□□ -0.67
CD46-205ENST00000358170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■□□□□ 10.9
CD46-205ENST00000358170 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
CD46-205ENST00000358170 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
CD46-205ENST00000358170 PDE4AP27815 886 aa10.88□□□□□ -0.67
CD46-205ENST00000358170 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
CD46-205ENST00000358170 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
CD46-205ENST00000358170 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
CD46-205ENST00000358170 CDC42BPBQ9Y5S2 1711 aa10.87□□□□□ -0.67
CD46-205ENST00000358170 RTL5Q5HYW3 569 aaPredicted RBP10.86□□□□□ -0.67
CD46-205ENST00000358170 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
CD46-205ENST00000358170 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
CD46-205ENST00000358170 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CD46-205ENST00000358170 KDM5DQ9BY66 1539 aa10.86□□□□□ -0.67
CD46-205ENST00000358170 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
CD46-205ENST00000358170 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
CD46-205ENST00000358170 CANXP27824 592 aaKnown RBP10.85□□□□□ -0.67
CD46-205ENST00000358170 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
CD46-205ENST00000358170 PLCH2O75038 1416 aa10.84□□□□□ -0.67
CD46-205ENST00000358170 AMER1Q5JTC6 1135 aaPredicted RBP10.84□□□□□ -0.67
CD46-205ENST00000358170 KANK1Q14678 1352 aa10.84□□□□□ -0.67
CD46-205ENST00000358170 ARHGEF5Q12774 1597 aa10.84□□□□□ -0.67
CD46-205ENST00000358170 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.67
CD46-205ENST00000358170 STK26Q9P289 416 aa10.83□□□□□ -0.68
CD46-205ENST00000358170 BCAR3O75815 825 aa10.83□□□□□ -0.68
CD46-205ENST00000358170 SLC12A5Q9H2X9 1139 aa10.83□□□□□ -0.68
CD46-205ENST00000358170 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
CD46-205ENST00000358170 TCERG1O14776 1098 aaKnown RBP10.82□□□□□ -0.68
CD46-205ENST00000358170 COL17A1Q9UMD9 1497 aaPredicted RBP10.82□□□□□ -0.68
CD46-205ENST00000358170 CHD1O14646 1710 aa10.82□□□□□ -0.68
CD46-205ENST00000358170 PLEKHH1Q9ULM0 1364 aa10.82□□□□□ -0.68
CD46-205ENST00000358170 PREX2Q70Z35 1606 aa10.82□□□□□ -0.68
CD46-205ENST00000358170 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
CD46-205ENST00000358170 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms