RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
CD46-204ENST00000357714 ANKRD30AQ9BXX3 1397 aa10.07□□□□□ -0.8
CD46-204ENST00000357714 RALGAPBQ86X10 1494 aa10.07□□□□□ -0.8
CD46-204ENST00000357714 IQGAP2Q13576 1575 aa10.06□□□□□ -0.8
CD46-204ENST00000357714 KIF14Q15058 1648 aa10.06□□□□□ -0.8
CD46-204ENST00000357714 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
CD46-204ENST00000357714 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
CD46-204ENST00000357714 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
CD46-204ENST00000357714 UHRF1BP1Q6BDS2 1440 aa10.05□□□□□ -0.8
CD46-204ENST00000357714 RGS3P49796 1198 aa10.04□□□□□ -0.8
CD46-204ENST00000357714 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
CD46-204ENST00000357714 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
CD46-204ENST00000357714 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CD46-204ENST00000357714 RGL3Q3MIN7 710 aa10.04□□□□□ -0.8
CD46-204ENST00000357714 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
CD46-204ENST00000357714 CENPQQ7L2Z9 268 aaPredicted RBP10.03□□□□□ -0.8
CD46-204ENST00000357714 TSPY4P0CV99 314 aa10.02□□□□□ -0.8
CD46-204ENST00000357714 TSPY10P0CW01 314 aa10.02□□□□□ -0.8
CD46-204ENST00000357714 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.81
CD46-204ENST00000357714 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
CD46-204ENST00000357714 NUP153P49790 1475 aaKnown RBP10.01□□□□□ -0.81
CD46-204ENST00000357714 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
CD46-204ENST00000357714 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CD46-204ENST00000357714 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.01□□□□□ -0.81
CD46-204ENST00000357714 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
CD46-204ENST00000357714 TROQ12816 1431 aaPredicted RBP10□□□□□ -0.81
CD46-204ENST00000357714 KDM2BQ8NHM5 1336 aa10□□□□□ -0.81
CD46-204ENST00000357714 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
CD46-204ENST00000357714 ADAMTS8Q9UP79 889 aa10□□□□□ -0.81
CD46-204ENST00000357714 C8orf34Q49A92 452 aa9.99□□□□□ -0.81
CD46-204ENST00000357714 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
CD46-204ENST00000357714 ARHGEF12Q9NZN5 1544 aa9.99□□□□□ -0.81
CD46-204ENST00000357714 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
CD46-204ENST00000357714 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
CD46-204ENST00000357714 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
CD46-204ENST00000357714 TMF1P82094 1093 aa9.97□□□□□ -0.81
CD46-204ENST00000357714 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
CD46-204ENST00000357714 ERCC6Q03468 1493 aa9.97□□□□□ -0.81
CD46-204ENST00000357714 BLMP54132 1417 aaPredicted RBP9.96□□□□□ -0.81
CD46-204ENST00000357714 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.81
CD46-204ENST00000357714 PLEKHD1A6NEE1 506 aa9.96□□□□□ -0.82
CD46-204ENST00000357714 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.82
CD46-204ENST00000357714 C9orf84Q5VXU9 1444 aa9.96□□□□□ -0.82
CD46-204ENST00000357714 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
CD46-204ENST00000357714 HNRNPMP52272 730 aaKnown RBP eCLIP9.95□□□□□ -0.829e-8■■■■■ 28.4
CD46-204ENST00000357714 PKNOX2Q96KN3 472 aa9.95□□□□□ -0.82
CD46-204ENST00000357714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.824e-9■■□□□ 11.7
CD46-204ENST00000357714 KNSTRNQ9Y448 316 aa9.95□□□□□ -0.82
CD46-204ENST00000357714 CCDC144AA2RUR9 1427 aa9.95□□□□□ -0.82
CD46-204ENST00000357714 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
CD46-204ENST00000357714 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
CD46-204ENST00000357714 TESK2Q96S53 571 aa9.94□□□□□ -0.82
CD46-204ENST00000357714 INSRP06213 1382 aa9.94□□□□□ -0.82
CD46-204ENST00000357714 RAPGEF6Q8TEU7 1601 aa9.94□□□□□ -0.82
CD46-204ENST00000357714 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 PLEKHH1Q9ULM0 1364 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 RSPH6AQ9H0K4 717 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 ADGBQ8N7X0 1667 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 KIAA0556O60303 1618 aa9.93□□□□□ -0.82
CD46-204ENST00000357714 SLKQ9H2G2 1235 aaPredicted RBP9.93□□□□□ -0.82
CD46-204ENST00000357714 ZMYM4Q5VZL5 1548 aa9.92□□□□□ -0.82
CD46-204ENST00000357714 PLB1Q6P1J6 1458 aa9.92□□□□□ -0.82
CD46-204ENST00000357714 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CD46-204ENST00000357714 BECN1Q14457 450 aa9.92□□□□□ -0.82
CD46-204ENST00000357714 FBLN2P98095 1184 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 CCDC146Q8IYE0 955 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 POGKQ9P215 609 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 ERBINQ96RT1 1412 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 ARXQ96QS3 562 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 COL17A1Q9UMD9 1497 aaPredicted RBP9.91□□□□□ -0.82
CD46-204ENST00000357714 E9PCH4 1651 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 ITSN2Q9NZM3 1697 aa9.91□□□□□ -0.82
CD46-204ENST00000357714 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
CD46-204ENST00000357714 BCAR3O75815 825 aa9.9□□□□□ -0.82
CD46-204ENST00000357714 SLFN5Q08AF3 891 aa9.9□□□□□ -0.82
CD46-204ENST00000357714 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
CD46-204ENST00000357714 CEP170Q5SW79 1584 aa9.89□□□□□ -0.83
CD46-204ENST00000357714 APAF1O14727 1248 aa9.89□□□□□ -0.83
CD46-204ENST00000357714 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
CD46-204ENST00000357714 GPRASP1Q5JY77 1395 aa9.88□□□□□ -0.83
CD46-204ENST00000357714 IGHDP01880 384 aa9.88□□□□□ -0.83
CD46-204ENST00000357714 ZNF521Q96K83 1311 aa9.88□□□□□ -0.83
CD46-204ENST00000357714 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
CD46-204ENST00000357714 UPF2Q9HAU5 1272 aaKnown RBP9.87□□□□□ -0.83
CD46-204ENST00000357714 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
CD46-204ENST00000357714 PTPRGP23470 1445 aa9.87□□□□□ -0.83
CD46-204ENST00000357714 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
CD46-204ENST00000357714 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
CD46-204ENST00000357714 SEC24BO95487 1268 aa9.87□□□□□ -0.83
CD46-204ENST00000357714 SPINK5Q9NQ38 1064 aaPredicted RBP9.87□□□□□ -0.83
CD46-204ENST00000357714 EIF3AQ14152 1382 aaKnown RBP9.86□□□□□ -0.83
CD46-204ENST00000357714 MAPK8IP3Q9UPT6 1336 aa9.86□□□□□ -0.83
CD46-204ENST00000357714 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
CD46-204ENST00000357714 CROCC2H7BZ55 1655 aa9.86□□□□□ -0.83
CD46-204ENST00000357714 CGNL1Q0VF96 1302 aa9.86□□□□□ -0.83
CD46-204ENST00000357714 FAM135AQ9P2D6 1515 aa9.86□□□□□ -0.83
CD46-204ENST00000357714 A2MP01023 1474 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 E9PSI1 815 aa9.85□□□□□ -0.83
CD46-204ENST00000357714 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms