RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-204ENST00000357248 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
SMARCA2-204ENST00000357248 EFCAB5A4FU69 1503 aa17.22■□□□□ 0.35
SMARCA2-204ENST00000357248 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
SMARCA2-204ENST00000357248 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
SMARCA2-204ENST00000357248 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCA2-204ENST00000357248 HMMRO75330 724 aa17.21■□□□□ 0.35
SMARCA2-204ENST00000357248 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
SMARCA2-204ENST00000357248 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.34
SMARCA2-204ENST00000357248 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.34
SMARCA2-204ENST00000357248 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
SMARCA2-204ENST00000357248 PES1O00541 588 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-204ENST00000357248 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
SMARCA2-204ENST00000357248 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
SMARCA2-204ENST00000357248 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
SMARCA2-204ENST00000357248 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
SMARCA2-204ENST00000357248 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
SMARCA2-204ENST00000357248 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-204ENST00000357248 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
SMARCA2-204ENST00000357248 TSR1Q2NL82 804 aaKnown RBP17.18■□□□□ 0.34
SMARCA2-204ENST00000357248 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
SMARCA2-204ENST00000357248 CUL7Q14999 1698 aa17.17■□□□□ 0.34
SMARCA2-204ENST00000357248 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
SMARCA2-204ENST00000357248 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-204ENST00000357248 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
SMARCA2-204ENST00000357248 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
SMARCA2-204ENST00000357248 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-204ENST00000357248 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
SMARCA2-204ENST00000357248 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
SMARCA2-204ENST00000357248 GGT6Q6P531 493 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 KIF16BQ96L93 1317 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 TPM2P07951 284 aa17.15■□□□□ 0.34
SMARCA2-204ENST00000357248 PHF14O94880 888 aa17.14■□□□□ 0.34
SMARCA2-204ENST00000357248 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
SMARCA2-204ENST00000357248 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
SMARCA2-204ENST00000357248 FYCO1Q9BQS8 1478 aa17.13■□□□□ 0.33
SMARCA2-204ENST00000357248 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
SMARCA2-204ENST00000357248 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-204ENST00000357248 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.338e-9■■■■■ 47.5
SMARCA2-204ENST00000357248 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-204ENST00000357248 CCDC70Q6NSX1 233 aa17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 TPM1P09493 284 aa17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 AKAP17AQ02040 695 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
SMARCA2-204ENST00000357248 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
SMARCA2-204ENST00000357248 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
SMARCA2-204ENST00000357248 H3BQV1 296 aa17.09■□□□□ 0.33
SMARCA2-204ENST00000357248 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
SMARCA2-204ENST00000357248 CCAR2Q8N163 923 aaKnown RBP17.09■□□□□ 0.33
SMARCA2-204ENST00000357248 RCAN3Q9UKA8 241 aa17.09■□□□□ 0.33
SMARCA2-204ENST00000357248 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.33
SMARCA2-204ENST00000357248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.33
SMARCA2-204ENST00000357248 ST18O60284 1047 aa17.08■□□□□ 0.33
SMARCA2-204ENST00000357248 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.33
SMARCA2-204ENST00000357248 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
SMARCA2-204ENST00000357248 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
SMARCA2-204ENST00000357248 GPS2Q13227 327 aa17.06■□□□□ 0.32
SMARCA2-204ENST00000357248 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 SYNE3Q6ZMZ3 975 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
SMARCA2-204ENST00000357248 NOL10Q9BSC4 688 aaKnown RBP17.04■□□□□ 0.32
SMARCA2-204ENST00000357248 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
SMARCA2-204ENST00000357248 RAD21O60216 631 aa17.04■□□□□ 0.32
SMARCA2-204ENST00000357248 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
SMARCA2-204ENST00000357248 AMPHP49418 695 aa17.04■□□□□ 0.32
SMARCA2-204ENST00000357248 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 CALRP27797 417 aaKnown RBP17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 MSH5O43196 834 aa17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 TERF2IPQ9NYB0 399 aa17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 FOXD4L5Q5VV16 416 aaPredicted RBP17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 FOXD4L4Q8WXT5 416 aaPredicted RBP17.03■□□□□ 0.32
SMARCA2-204ENST00000357248 BECN2A8MW95 431 aa17.02■□□□□ 0.32
SMARCA2-204ENST00000357248 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
SMARCA2-204ENST00000357248 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
SMARCA2-204ENST00000357248 CCDC47Q96A33 483 aaKnown RBP17.02■□□□□ 0.31
SMARCA2-204ENST00000357248 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.31
SMARCA2-204ENST00000357248 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.31
SMARCA2-204ENST00000357248 IPO7O95373 1038 aaKnown RBP17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 RALBP1Q15311 655 aa17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
SMARCA2-204ENST00000357248 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
SMARCA2-204ENST00000357248 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
SMARCA2-204ENST00000357248 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-204ENST00000357248 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-204ENST00000357248 ATP6V1DQ9Y5K8 247 aa16.99■□□□□ 0.31
SMARCA2-204ENST00000357248 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
SMARCA2-204ENST00000357248 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
SMARCA2-204ENST00000357248 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms