RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
PTBP1-203ENST00000356948 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
PTBP1-203ENST00000356948 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.89
PTBP1-203ENST00000356948 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
PTBP1-203ENST00000356948 PLA2R1Q13018 1463 aa20.57■□□□□ 0.88
PTBP1-203ENST00000356948 SKAP1Q86WV1 359 aa20.57■□□□□ 0.88
PTBP1-203ENST00000356948 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
PTBP1-203ENST00000356948 ERCC6L2Q5T890 1561 aa20.56■□□□□ 0.88
PTBP1-203ENST00000356948 FAM135AQ9P2D6 1515 aa20.56■□□□□ 0.88
PTBP1-203ENST00000356948 SYCP2Q9BX26 1530 aa20.55■□□□□ 0.88
PTBP1-203ENST00000356948 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
PTBP1-203ENST00000356948 DISP3Q9P2K9 1392 aa20.54■□□□□ 0.88
PTBP1-203ENST00000356948 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
PTBP1-203ENST00000356948 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
PTBP1-203ENST00000356948 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
PTBP1-203ENST00000356948 DEKP35659 375 aaKnown RBP20.52■□□□□ 0.88
PTBP1-203ENST00000356948 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
PTBP1-203ENST00000356948 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.88
PTBP1-203ENST00000356948 PLIN1O60240 522 aa20.52■□□□□ 0.88
PTBP1-203ENST00000356948 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.88
PTBP1-203ENST00000356948 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.88
PTBP1-203ENST00000356948 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
PTBP1-203ENST00000356948 CCDC141Q6ZP82 1450 aa20.51■□□□□ 0.87
PTBP1-203ENST00000356948 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
PTBP1-203ENST00000356948 PANK3Q9H999 370 aa20.5■□□□□ 0.87
PTBP1-203ENST00000356948 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
PTBP1-203ENST00000356948 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
PTBP1-203ENST00000356948 TESK2Q96S53 571 aa20.49■□□□□ 0.87
PTBP1-203ENST00000356948 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
PTBP1-203ENST00000356948 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-203ENST00000356948 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
PTBP1-203ENST00000356948 A2MP01023 1474 aa20.48■□□□□ 0.87
PTBP1-203ENST00000356948 LRPPRCP42704 1394 aaKnown RBP20.48■□□□□ 0.87
PTBP1-203ENST00000356948 ARHGEF12Q9NZN5 1544 aa20.48■□□□□ 0.87
PTBP1-203ENST00000356948 ARID4BQ4LE39 1312 aaPredicted RBP20.47■□□□□ 0.87
PTBP1-203ENST00000356948 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
PTBP1-203ENST00000356948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.865e-7■■■□□ 14.7
PTBP1-203ENST00000356948 RALBP1Q15311 655 aa20.43■□□□□ 0.86
PTBP1-203ENST00000356948 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
PTBP1-203ENST00000356948 BRD4O60885 1362 aaPredicted RBP20.42■□□□□ 0.86
PTBP1-203ENST00000356948 ARHGEF5Q12774 1597 aa20.41■□□□□ 0.86
PTBP1-203ENST00000356948 RRP1P56182 461 aaKnown RBP20.41■□□□□ 0.86
PTBP1-203ENST00000356948 NLRP13Q86W25 1043 aa20.41■□□□□ 0.86
PTBP1-203ENST00000356948 PREX2Q70Z35 1606 aa20.41■□□□□ 0.86
PTBP1-203ENST00000356948 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
PTBP1-203ENST00000356948 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
PTBP1-203ENST00000356948 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
PTBP1-203ENST00000356948 PARD3Q8TEW0 1356 aa20.39■□□□□ 0.86
PTBP1-203ENST00000356948 CHD1O14646 1710 aa20.38■□□□□ 0.85
PTBP1-203ENST00000356948 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
PTBP1-203ENST00000356948 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
PTBP1-203ENST00000356948 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
PTBP1-203ENST00000356948 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
PTBP1-203ENST00000356948 C20orf194Q5TEA3 1177 aa20.36■□□□□ 0.85
PTBP1-203ENST00000356948 E9PCH4 1651 aa20.36■□□□□ 0.85
PTBP1-203ENST00000356948 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
PTBP1-203ENST00000356948 ERBINQ96RT1 1412 aa20.33■□□□□ 0.85
PTBP1-203ENST00000356948 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.84
PTBP1-203ENST00000356948 MYT1LQ9UL68 1186 aa20.31■□□□□ 0.84
PTBP1-203ENST00000356948 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
PTBP1-203ENST00000356948 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-203ENST00000356948 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
PTBP1-203ENST00000356948 TMF1P82094 1093 aa20.3■□□□□ 0.84
PTBP1-203ENST00000356948 GPRASP1Q5JY77 1395 aa20.29■□□□□ 0.84
PTBP1-203ENST00000356948 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
PTBP1-203ENST00000356948 MAGI2Q86UL8 1455 aa20.29■□□□□ 0.84
PTBP1-203ENST00000356948 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
PTBP1-203ENST00000356948 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
PTBP1-203ENST00000356948 UNC13BO14795 1591 aa20.26■□□□□ 0.83
PTBP1-203ENST00000356948 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
PTBP1-203ENST00000356948 PRDM15P57071 1507 aaPredicted RBP20.26■□□□□ 0.83
PTBP1-203ENST00000356948 SPAG9O60271 1321 aaKnown RBP20.23■□□□□ 0.83
PTBP1-203ENST00000356948 PPP2R1AP30153 589 aa20.23■□□□□ 0.83
PTBP1-203ENST00000356948 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
PTBP1-203ENST00000356948 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
PTBP1-203ENST00000356948 PLCH2O75038 1416 aa20.22■□□□□ 0.83
PTBP1-203ENST00000356948 CFAP70Q5T0N1 1121 aa20.22■□□□□ 0.83
PTBP1-203ENST00000356948 IQGAP3Q86VI3 1631 aa20.22■□□□□ 0.83
PTBP1-203ENST00000356948 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-203ENST00000356948 KIF3BO15066 747 aa20.21■□□□□ 0.83
PTBP1-203ENST00000356948 AMER1Q5JTC6 1135 aaPredicted RBP20.21■□□□□ 0.83
PTBP1-203ENST00000356948 KNSTRNQ9Y448 316 aa20.21■□□□□ 0.83
PTBP1-203ENST00000356948 WDR7Q9Y4E6 1490 aa20.2■□□□□ 0.82
PTBP1-203ENST00000356948 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
PTBP1-203ENST00000356948 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
PTBP1-203ENST00000356948 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
PTBP1-203ENST00000356948 PDE4AP27815 886 aa20.18■□□□□ 0.82
PTBP1-203ENST00000356948 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
PTBP1-203ENST00000356948 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
PTBP1-203ENST00000356948 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
PTBP1-203ENST00000356948 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
PTBP1-203ENST00000356948 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
PTBP1-203ENST00000356948 ATP10AO60312 1499 aa20.16■□□□□ 0.82
PTBP1-203ENST00000356948 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
PTBP1-203ENST00000356948 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
PTBP1-203ENST00000356948 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
PTBP1-203ENST00000356948 LAS1LQ9Y4W2 734 aaKnown RBP20.15■□□□□ 0.82
PTBP1-203ENST00000356948 BLMP54132 1417 aaPredicted RBP20.15■□□□□ 0.82
PTBP1-203ENST00000356948 ZBTB47Q9UFB7 747 aaPredicted RBP20.14■□□□□ 0.81
PTBP1-203ENST00000356948 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms