RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ERBINQ96RT1 1412 aa31.39■■■□□ 2.62
CHRD-203ENST00000356534 CEBPAP49715 358 aaPredicted RBP31.38■■■□□ 2.61
CHRD-203ENST00000356534 NPATQ14207 1427 aa31.38■■■□□ 2.61
CHRD-203ENST00000356534 FAM50AQ14320 339 aaKnown RBP31.37■■■□□ 2.61
CHRD-203ENST00000356534 ANKRD30AQ9BXX3 1397 aa31.37■■■□□ 2.61
CHRD-203ENST00000356534 UHRF1BP1Q6BDS2 1440 aa31.37■■■□□ 2.61
CHRD-203ENST00000356534 ADGRL2O95490 1459 aa31.36■■■□□ 2.61
CHRD-203ENST00000356534 ZMYM3Q14202 1370 aa31.36■■■□□ 2.61
CHRD-203ENST00000356534 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
CHRD-203ENST00000356534 MROH1Q8NDA8 1641 aa31.3■■■□□ 2.6
CHRD-203ENST00000356534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.3■■■□□ 2.6
CHRD-203ENST00000356534 CEP152O94986 1710 aa31.29■■■□□ 2.6
CHRD-203ENST00000356534 PRDM15P57071 1507 aaPredicted RBP31.29■■■□□ 2.6
CHRD-203ENST00000356534 ZNF142P52746 1687 aaPredicted RBP31.29■■■□□ 2.6
CHRD-203ENST00000356534 NCOA1Q15788 1441 aa31.28■■■□□ 2.6
CHRD-203ENST00000356534 MYO3AQ8NEV4 1616 aa31.27■■■□□ 2.6
CHRD-203ENST00000356534 WASHC2CQ9Y4E1 1318 aa31.25■■■□□ 2.59
CHRD-203ENST00000356534 RRP7BPQ9NSQ0 103 aa31.25■■■□□ 2.59
CHRD-203ENST00000356534 PZPP20742 1482 aa31.25■■■□□ 2.59
CHRD-203ENST00000356534 PTPRKQ15262 1439 aa31.24■■■□□ 2.59
CHRD-203ENST00000356534 ABCC3O15438 1527 aa31.24■■■□□ 2.59
CHRD-203ENST00000356534 CHIC2Q9UKJ5 165 aa31.24■■■□□ 2.59
CHRD-203ENST00000356534 CAMSAP1Q5T5Y3 1602 aa31.23■■■□□ 2.59
CHRD-203ENST00000356534 PPARGC1BQ86YN6 1023 aaKnown RBP31.22■■■□□ 2.59
CHRD-203ENST00000356534 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
CHRD-203ENST00000356534 ROCK1Q13464 1354 aa31.17■■■□□ 2.58
CHRD-203ENST00000356534 HSPA2P54652 639 aa31.16■■■□□ 2.58
CHRD-203ENST00000356534 CEP170BQ9Y4F5 1589 aaPredicted RBP31.16■■■□□ 2.58
CHRD-203ENST00000356534 KANK1Q14678 1352 aa31.16■■■□□ 2.58
CHRD-203ENST00000356534 CFAP65Q6ZU64 1925 aaKnown RBP31.16■■■□□ 2.58
CHRD-203ENST00000356534 ANKRD50Q9ULJ7 1429 aa31.13■■■□□ 2.57
CHRD-203ENST00000356534 STRCQ7RTU9 1775 aa31.12■■■□□ 2.57
CHRD-203ENST00000356534 VWDEQ8N2E2 1590 aa31.1■■■□□ 2.57
CHRD-203ENST00000356534 SPATA31D1Q6ZQQ2 1576 aa31.09■■■□□ 2.57
CHRD-203ENST00000356534 TNRQ92752 1358 aa31.09■■■□□ 2.57
CHRD-203ENST00000356534 ILDR1Q86SU0 546 aaPredicted RBP31.09■■■□□ 2.57
CHRD-203ENST00000356534 LMTK2Q8IWU2 1503 aa31.08■■■□□ 2.57
CHRD-203ENST00000356534 A2ML1A8K2U0 1454 aa31.08■■■□□ 2.57
CHRD-203ENST00000356534 UNC13BO14795 1591 aa31.06■■■□□ 2.56
CHRD-203ENST00000356534 ARHGAP31Q2M1Z3 1444 aa31.06■■■□□ 2.56
CHRD-203ENST00000356534 NLRP1Q9C000 1473 aa31.05■■■□□ 2.56
CHRD-203ENST00000356534 ERVK-7P63135 1459 aa31.03■■■□□ 2.56
CHRD-203ENST00000356534 PLA2R1Q13018 1463 aa31.01■■■□□ 2.56
CHRD-203ENST00000356534 GCC2Q8IWJ2 1684 aa31.01■■■□□ 2.55
CHRD-203ENST00000356534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.01■■■□□ 2.553e-7■□□□□ 11.3
CHRD-203ENST00000356534 DMRT2Q9Y5R5 561 aa31■■■□□ 2.55
CHRD-203ENST00000356534 TET3O43151 1660 aa31■■■□□ 2.55
CHRD-203ENST00000356534 EFCAB6Q5THR3 1501 aa30.99■■■□□ 2.55
CHRD-203ENST00000356534 ITGAEP38570 1179 aa30.99■■■□□ 2.55
CHRD-203ENST00000356534 FBXO31Q5XUX0 539 aaPredicted RBP30.99■■■□□ 2.55
CHRD-203ENST00000356534 POLR1AO95602 1720 aaPredicted RBP30.98■■■□□ 2.55
CHRD-203ENST00000356534 IQGAP3Q86VI3 1631 aa30.95■■■□□ 2.54
CHRD-203ENST00000356534 UGGT1Q9NYU2 1555 aa30.94■■■□□ 2.54
CHRD-203ENST00000356534 PTPRTO14522 1441 aa30.92■■■□□ 2.54
CHRD-203ENST00000356534 RPRD2Q5VT52 1461 aaKnown RBP30.91■■■□□ 2.54
CHRD-203ENST00000356534 UBR1Q8IWV7 1749 aa30.89■■■□□ 2.54
CHRD-203ENST00000356534 KDM5AP29375 1690 aaKnown RBP30.88■■■□□ 2.53
CHRD-203ENST00000356534 PKD2Q13563 968 aa30.86■■■□□ 2.53
CHRD-203ENST00000356534 THEMISQ8N1K5 641 aaPredicted RBP30.83■■■□□ 2.53
CHRD-203ENST00000356534 E9PCH4 1651 aa30.82■■■□□ 2.52
CHRD-203ENST00000356534 PIK3C2BO00750 1634 aa30.81■■■□□ 2.52
CHRD-203ENST00000356534 SYNMO15061 1565 aa30.8■■■□□ 2.52
CHRD-203ENST00000356534 HFM1A2PYH4 1435 aa30.8■■■□□ 2.52
CHRD-203ENST00000356534 NAIPQ13075 1403 aa30.8■■■□□ 2.52
CHRD-203ENST00000356534 NOS1P29475 1434 aa30.79■■■□□ 2.52
CHRD-203ENST00000356534 NUP155O75694 1391 aa30.77■■■□□ 2.52
CHRD-203ENST00000356534 NEURL4Q96JN8 1562 aa30.75■■■□□ 2.51
CHRD-203ENST00000356534 NCKAP5LQ9HCH0 1330 aa30.73■■■□□ 2.51
CHRD-203ENST00000356534 IQGAP1P46940 1657 aa30.71■■■□□ 2.51
CHRD-203ENST00000356534 ANKLE2Q86XL3 938 aa30.71■■■□□ 2.51
CHRD-203ENST00000356534 ADGRB3O60242 1522 aa30.71■■■□□ 2.51
CHRD-203ENST00000356534 SPHKAPQ2M3C7 1700 aa30.7■■■□□ 2.51
CHRD-203ENST00000356534 SLIT1O75093 1534 aa30.7■■■□□ 2.51
CHRD-203ENST00000356534 SLC52A1Q9NWF4 448 aa30.69■■■□□ 2.5
CHRD-203ENST00000356534 MED14O60244 1454 aa30.69■■■□□ 2.5
CHRD-203ENST00000356534 MYO5BQ9ULV0 1848 aa30.68■■■□□ 2.5
CHRD-203ENST00000356534 ARHGAP23Q9P227 1491 aa30.66■■■□□ 2.5
CHRD-203ENST00000356534 STAG3Q9UJ98 1225 aa30.66■■■□□ 2.5
CHRD-203ENST00000356534 SCAF11Q99590 1463 aaKnown RBP30.63■■■□□ 2.49
CHRD-203ENST00000356534 NPHP4O75161 1426 aaPredicted RBP30.62■■■□□ 2.49
CHRD-203ENST00000356534 IDI1Q13907 227 aa30.61■■■□□ 2.49
CHRD-203ENST00000356534 LTBP4Q8N2S1 1624 aa30.61■■■□□ 2.49
CHRD-203ENST00000356534 TMEM131LA2VDJ0 1609 aa30.58■■■□□ 2.49
CHRD-203ENST00000356534 TMEM2Q9UHN6 1383 aa30.57■■■□□ 2.48
CHRD-203ENST00000356534 ACIN1Q9UKV3 1341 aaKnown RBP30.57■■■□□ 2.48
CHRD-203ENST00000356534 CERKQ8TCT0 537 aa30.57■■■□□ 2.48
CHRD-203ENST00000356534 EID1Q9Y6B2 187 aa30.57■■■□□ 2.48
CHRD-203ENST00000356534 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
CHRD-203ENST00000356534 FBXO41Q8TF61 875 aa30.53■■■□□ 2.48
CHRD-203ENST00000356534 TRIM52Q96A61 297 aa30.52■■■□□ 2.48
CHRD-203ENST00000356534 KIF1BO60333 1816 aa30.52■■■□□ 2.48
CHRD-203ENST00000356534 TRPM2O94759 1503 aa30.51■■■□□ 2.47
CHRD-203ENST00000356534 TXNDC2Q86VQ3 553 aa30.5■■■□□ 2.47
CHRD-203ENST00000356534 CPS1P31327 1500 aa30.5■■■□□ 2.47
CHRD-203ENST00000356534 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
CHRD-203ENST00000356534 SETD5Q9C0A6 1442 aa30.45■■■□□ 2.46
CHRD-203ENST00000356534 LTKP29376 864 aa30.44■■■□□ 2.46
CHRD-203ENST00000356534 HDGFP51858 240 aaKnown RBP30.44■■■□□ 2.46
CHRD-203ENST00000356534 CLTCL1P53675 1640 aa30.43■■■□□ 2.46
CHRD-203ENST00000356534 ZFYVE9O95405 1425 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms