RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
STRN3-201ENST00000355683 APAF1O14727 1248 aa19.77■□□□□ 0.76
STRN3-201ENST00000355683 NLRP13Q86W25 1043 aa19.77■□□□□ 0.76
STRN3-201ENST00000355683 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
STRN3-201ENST00000355683 APBB1O00213 710 aa19.76■□□□□ 0.75
STRN3-201ENST00000355683 FYCO1Q9BQS8 1478 aa19.76■□□□□ 0.75
STRN3-201ENST00000355683 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
STRN3-201ENST00000355683 TCERG1O14776 1098 aaKnown RBP19.75■□□□□ 0.75
STRN3-201ENST00000355683 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
STRN3-201ENST00000355683 MORC1Q86VD1 984 aa19.75■□□□□ 0.75
STRN3-201ENST00000355683 PDE4AP27815 886 aa19.74■□□□□ 0.75
STRN3-201ENST00000355683 RRP1P56182 461 aaKnown RBP19.74■□□□□ 0.75
STRN3-201ENST00000355683 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
STRN3-201ENST00000355683 IPO9Q96P70 1041 aaKnown RBP19.74■□□□□ 0.75
STRN3-201ENST00000355683 MAPKBP1O60336 1514 aa19.73■□□□□ 0.75
STRN3-201ENST00000355683 FTSJ3Q8IY81 847 aaKnown RBP19.73■□□□□ 0.75
STRN3-201ENST00000355683 GZF1Q9H116 711 aaPredicted RBP19.73■□□□□ 0.75
STRN3-201ENST00000355683 ADAMTS8Q9UP79 889 aa19.73■□□□□ 0.75
STRN3-201ENST00000355683 ELL2O00472 640 aaPredicted RBP19.73■□□□□ 0.75
STRN3-201ENST00000355683 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
STRN3-201ENST00000355683 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.752e-7■■■■□ 25.5
STRN3-201ENST00000355683 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
STRN3-201ENST00000355683 PCF11O94913 1555 aaKnown RBP19.71■□□□□ 0.75
STRN3-201ENST00000355683 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
STRN3-201ENST00000355683 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
STRN3-201ENST00000355683 COG6Q9Y2V7 657 aa19.7■□□□□ 0.74
STRN3-201ENST00000355683 POGKQ9P215 609 aa19.69■□□□□ 0.74
STRN3-201ENST00000355683 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
STRN3-201ENST00000355683 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
STRN3-201ENST00000355683 EPRSP07814 1512 aaKnown RBP19.69■□□□□ 0.74
STRN3-201ENST00000355683 RALBP1Q15311 655 aa19.68■□□□□ 0.74
STRN3-201ENST00000355683 NUP160Q12769 1436 aa19.67■□□□□ 0.74
STRN3-201ENST00000355683 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
STRN3-201ENST00000355683 PNISRQ8TF01 805 aaKnown RBP19.67■□□□□ 0.74
STRN3-201ENST00000355683 HFM1A2PYH4 1435 aa19.66■□□□□ 0.74
STRN3-201ENST00000355683 C20orf194Q5TEA3 1177 aa19.65■□□□□ 0.74
STRN3-201ENST00000355683 FOXD4L1Q9NU39 408 aa19.65■□□□□ 0.74
STRN3-201ENST00000355683 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
STRN3-201ENST00000355683 GOLGA2Q08379 1002 aa19.65■□□□□ 0.74
STRN3-201ENST00000355683 IL27Q8NEV9 243 aa19.64■□□□□ 0.74
STRN3-201ENST00000355683 KIF15Q9NS87 1388 aa19.63■□□□□ 0.73
STRN3-201ENST00000355683 RSPH4AQ5TD94 716 aa19.63■□□□□ 0.73
STRN3-201ENST00000355683 CCDC144AA2RUR9 1427 aa19.62■□□□□ 0.73
STRN3-201ENST00000355683 ANKRD50Q9ULJ7 1429 aa19.62■□□□□ 0.73
STRN3-201ENST00000355683 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
STRN3-201ENST00000355683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.734e-7■■□□□ 11.5
STRN3-201ENST00000355683 HECW1Q76N89 1606 aa19.61■□□□□ 0.73
STRN3-201ENST00000355683 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
STRN3-201ENST00000355683 CDCA8Q53HL2 280 aa19.59■□□□□ 0.73
STRN3-201ENST00000355683 BCAR3O75815 825 aa19.59■□□□□ 0.73
STRN3-201ENST00000355683 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
STRN3-201ENST00000355683 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
STRN3-201ENST00000355683 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
STRN3-201ENST00000355683 RAPGEF3O95398 923 aa19.57■□□□□ 0.72
STRN3-201ENST00000355683 MAPK8IP3Q9UPT6 1336 aa19.57■□□□□ 0.72
STRN3-201ENST00000355683 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
STRN3-201ENST00000355683 ARHGAP5Q13017 1502 aa19.56■□□□□ 0.72
STRN3-201ENST00000355683 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
STRN3-201ENST00000355683 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
STRN3-201ENST00000355683 ANP32BQ92688 251 aaKnown RBP19.55■□□□□ 0.72
STRN3-201ENST00000355683 MFAP1P55081 439 aaKnown RBP19.54■□□□□ 0.72
STRN3-201ENST00000355683 ITPRIPQ8IWB1 547 aa19.54■□□□□ 0.72
STRN3-201ENST00000355683 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
STRN3-201ENST00000355683 DISP1Q96F81 1524 aa19.54■□□□□ 0.72
STRN3-201ENST00000355683 KANK1Q14678 1352 aa19.52■□□□□ 0.72
STRN3-201ENST00000355683 NAP1L5Q96NT1 182 aaPredicted RBP19.52■□□□□ 0.72
STRN3-201ENST00000355683 ERICH6BQ5W0A0 696 aa19.51■□□□□ 0.71
STRN3-201ENST00000355683 ATP10BO94823 1461 aa19.51■□□□□ 0.71
STRN3-201ENST00000355683 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
STRN3-201ENST00000355683 MINK1Q8N4C8 1332 aaPredicted RBP19.5■□□□□ 0.71
STRN3-201ENST00000355683 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
STRN3-201ENST00000355683 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
STRN3-201ENST00000355683 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
STRN3-201ENST00000355683 TAOK2Q9UL54 1235 aa19.5■□□□□ 0.71
STRN3-201ENST00000355683 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
STRN3-201ENST00000355683 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
STRN3-201ENST00000355683 LMOD2Q6P5Q4 547 aa19.49■□□□□ 0.71
STRN3-201ENST00000355683 BECN1Q14457 450 aa19.48■□□□□ 0.71
STRN3-201ENST00000355683 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
STRN3-201ENST00000355683 GGNBP2Q9H3C7 697 aa19.47■□□□□ 0.71
STRN3-201ENST00000355683 DAPK1P53355 1430 aa19.46■□□□□ 0.71
STRN3-201ENST00000355683 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
STRN3-201ENST00000355683 CENPJQ9HC77 1338 aaPredicted RBP19.45■□□□□ 0.7
STRN3-201ENST00000355683 CD109Q6YHK3 1445 aa19.44■□□□□ 0.7
STRN3-201ENST00000355683 CHD1O14646 1710 aa19.44■□□□□ 0.7
STRN3-201ENST00000355683 ABCC5O15440 1437 aa19.44■□□□□ 0.7
STRN3-201ENST00000355683 SCAPERQ9BY12 1400 aa19.44■□□□□ 0.7
STRN3-201ENST00000355683 TRIM44Q96DX7 344 aaPredicted RBP19.43■□□□□ 0.7
STRN3-201ENST00000355683 PPP2R1AP30153 589 aa19.43■□□□□ 0.7
STRN3-201ENST00000355683 ZNF428Q96B54 188 aa19.43■□□□□ 0.7
STRN3-201ENST00000355683 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
STRN3-201ENST00000355683 GLIPR1L2Q4G1C9 344 aa19.42■□□□□ 0.7
STRN3-201ENST00000355683 TSR2Q969E8 191 aaKnown RBP19.41■□□□□ 0.7
STRN3-201ENST00000355683 ASXL2Q76L83 1435 aa19.41■□□□□ 0.7
STRN3-201ENST00000355683 FBLN1P23142 703 aa19.41■□□□□ 0.7
STRN3-201ENST00000355683 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
STRN3-201ENST00000355683 FOXD4L4Q8WXT5 416 aaPredicted RBP19.4■□□□□ 0.7
STRN3-201ENST00000355683 BRPF3Q9ULD4 1205 aa19.4■□□□□ 0.7
STRN3-201ENST00000355683 HMOX1P09601 288 aa19.4■□□□□ 0.7
STRN3-201ENST00000355683 NOL8Q76FK4 1167 aaKnown RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms