RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
PGBD2-202ENST00000355360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.1■□□□□ 0.65
PGBD2-202ENST00000355360 PLEKHH2Q8IVE3 1493 aa19.09■□□□□ 0.65
PGBD2-202ENST00000355360 MSH5O43196 834 aa19.09■□□□□ 0.65
PGBD2-202ENST00000355360 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
PGBD2-202ENST00000355360 PNISRQ8TF01 805 aaKnown RBP19.09■□□□□ 0.65
PGBD2-202ENST00000355360 CCDC144AA2RUR9 1427 aa19.09■□□□□ 0.65
PGBD2-202ENST00000355360 KDM5DQ9BY66 1539 aa19.08■□□□□ 0.64
PGBD2-202ENST00000355360 PLA2R1Q13018 1463 aa19.07■□□□□ 0.64
PGBD2-202ENST00000355360 MYT1Q01538 1121 aa19.06■□□□□ 0.64
PGBD2-202ENST00000355360 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
PGBD2-202ENST00000355360 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
PGBD2-202ENST00000355360 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
PGBD2-202ENST00000355360 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
PGBD2-202ENST00000355360 A2MP01023 1474 aa19.01■□□□□ 0.63
PGBD2-202ENST00000355360 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
PGBD2-202ENST00000355360 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
PGBD2-202ENST00000355360 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
PGBD2-202ENST00000355360 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
PGBD2-202ENST00000355360 MYO5CQ9NQX4 1742 aa18.98■□□□□ 0.63
PGBD2-202ENST00000355360 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
PGBD2-202ENST00000355360 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
PGBD2-202ENST00000355360 RSPH4AQ5TD94 716 aa18.97■□□□□ 0.63
PGBD2-202ENST00000355360 TRAPPC8Q9Y2L5 1435 aa18.96■□□□□ 0.63
PGBD2-202ENST00000355360 ABCC2Q92887 1545 aa18.96■□□□□ 0.63
PGBD2-202ENST00000355360 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
PGBD2-202ENST00000355360 TESK2Q96S53 571 aa18.94■□□□□ 0.62
PGBD2-202ENST00000355360 PANK3Q9H999 370 aa18.94■□□□□ 0.62
PGBD2-202ENST00000355360 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
PGBD2-202ENST00000355360 PER1O15534 1290 aaPredicted RBP18.93■□□□□ 0.62
PGBD2-202ENST00000355360 UNC13BO14795 1591 aa18.93■□□□□ 0.62
PGBD2-202ENST00000355360 E9PCH4 1651 aa18.92■□□□□ 0.62
PGBD2-202ENST00000355360 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
PGBD2-202ENST00000355360 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
PGBD2-202ENST00000355360 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
PGBD2-202ENST00000355360 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
PGBD2-202ENST00000355360 ZCCHC11Q5TAX3 1644 aaKnown RBP18.91■□□□□ 0.62
PGBD2-202ENST00000355360 RALBP1Q15311 655 aa18.91■□□□□ 0.62
PGBD2-202ENST00000355360 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
PGBD2-202ENST00000355360 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
PGBD2-202ENST00000355360 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
PGBD2-202ENST00000355360 IQGAP3Q86VI3 1631 aa18.88■□□□□ 0.61
PGBD2-202ENST00000355360 PLCH2O75038 1416 aa18.88■□□□□ 0.61
PGBD2-202ENST00000355360 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
PGBD2-202ENST00000355360 NLRP13Q86W25 1043 aa18.87■□□□□ 0.61
PGBD2-202ENST00000355360 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
PGBD2-202ENST00000355360 PLXNC1O60486 1568 aa18.86■□□□□ 0.61
PGBD2-202ENST00000355360 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
PGBD2-202ENST00000355360 PARD3Q8TEW0 1356 aa18.85■□□□□ 0.61
PGBD2-202ENST00000355360 ERBINQ96RT1 1412 aa18.85■□□□□ 0.61
PGBD2-202ENST00000355360 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
PGBD2-202ENST00000355360 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
PGBD2-202ENST00000355360 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
PGBD2-202ENST00000355360 PLIN1O60240 522 aa18.84■□□□□ 0.61
PGBD2-202ENST00000355360 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.61
PGBD2-202ENST00000355360 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.6
PGBD2-202ENST00000355360 TMF1P82094 1093 aa18.83■□□□□ 0.6
PGBD2-202ENST00000355360 FANCIQ9NVI1 1328 aa18.82■□□□□ 0.6
PGBD2-202ENST00000355360 ABCC1P33527 1531 aa18.82■□□□□ 0.6
PGBD2-202ENST00000355360 KIF3BO15066 747 aa18.8■□□□□ 0.6
PGBD2-202ENST00000355360 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
PGBD2-202ENST00000355360 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
PGBD2-202ENST00000355360 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
PGBD2-202ENST00000355360 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
PGBD2-202ENST00000355360 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
PGBD2-202ENST00000355360 ATP10AO60312 1499 aa18.76■□□□□ 0.59
PGBD2-202ENST00000355360 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
PGBD2-202ENST00000355360 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
PGBD2-202ENST00000355360 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
PGBD2-202ENST00000355360 SCAPERQ9BY12 1400 aa18.76■□□□□ 0.59
PGBD2-202ENST00000355360 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
PGBD2-202ENST00000355360 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
PGBD2-202ENST00000355360 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
PGBD2-202ENST00000355360 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
PGBD2-202ENST00000355360 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
PGBD2-202ENST00000355360 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
PGBD2-202ENST00000355360 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
PGBD2-202ENST00000355360 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
PGBD2-202ENST00000355360 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
PGBD2-202ENST00000355360 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
PGBD2-202ENST00000355360 FANCAO15360 1455 aa18.7■□□□□ 0.58
PGBD2-202ENST00000355360 CHGAP10645 457 aaKnown RBP18.7■□□□□ 0.58
PGBD2-202ENST00000355360 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
PGBD2-202ENST00000355360 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
PGBD2-202ENST00000355360 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
PGBD2-202ENST00000355360 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
PGBD2-202ENST00000355360 LAMC1P11047 1609 aa18.69■□□□□ 0.58
PGBD2-202ENST00000355360 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
PGBD2-202ENST00000355360 C20orf194Q5TEA3 1177 aa18.68■□□□□ 0.58
PGBD2-202ENST00000355360 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
PGBD2-202ENST00000355360 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
PGBD2-202ENST00000355360 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
PGBD2-202ENST00000355360 TRPM2O94759 1503 aa18.65■□□□□ 0.58
PGBD2-202ENST00000355360 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
PGBD2-202ENST00000355360 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
PGBD2-202ENST00000355360 CRBNQ96SW2 442 aa18.65■□□□□ 0.58
PGBD2-202ENST00000355360 IQGAP1P46940 1657 aa18.64■□□□□ 0.58
PGBD2-202ENST00000355360 CEP152O94986 1710 aa18.64■□□□□ 0.57
PGBD2-202ENST00000355360 PLEKHH1Q9ULM0 1364 aa18.64■□□□□ 0.57
PGBD2-202ENST00000355360 NUTM2DQ5VT03 806 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms