RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
CD46-203ENST00000354848 ZMYM4Q5VZL5 1548 aa10.13□□□□□ -0.79
CD46-203ENST00000354848 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
CD46-203ENST00000354848 CUL7Q14999 1698 aa10.13□□□□□ -0.79
CD46-203ENST00000354848 PLEKHH2Q8IVE3 1493 aa10.13□□□□□ -0.79
CD46-203ENST00000354848 SEC24BO95487 1268 aa10.12□□□□□ -0.79
CD46-203ENST00000354848 RALGAPBQ86X10 1494 aa10.12□□□□□ -0.79
CD46-203ENST00000354848 INSRP06213 1382 aa10.12□□□□□ -0.79
CD46-203ENST00000354848 ROCK1Q13464 1354 aa10.12□□□□□ -0.79
CD46-203ENST00000354848 CARD11Q9BXL7 1154 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
CD46-203ENST00000354848 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
CD46-203ENST00000354848 ST20-MTHFSA0A0A6YYL1 179 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 ESPNB1AK53 854 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 PZPP20742 1482 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 NLRP1Q9C000 1473 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
CD46-203ENST00000354848 DAPK1P53355 1430 aa10.1□□□□□ -0.79
CD46-203ENST00000354848 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
CD46-203ENST00000354848 MRE11P49959 708 aa10.1□□□□□ -0.79
CD46-203ENST00000354848 TPM2P07951 284 aa10.09□□□□□ -0.79
CD46-203ENST00000354848 MCM4P33991 863 aa10.09□□□□□ -0.79
CD46-203ENST00000354848 DUSP27Q5VZP5 1158 aa10.09□□□□□ -0.79
CD46-203ENST00000354848 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
CD46-203ENST00000354848 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
CD46-203ENST00000354848 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
CD46-203ENST00000354848 CALD1Q05682 793 aaKnown RBP10.08□□□□□ -0.8
CD46-203ENST00000354848 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
CD46-203ENST00000354848 PRDM4Q9UKN5 801 aa10.07□□□□□ -0.8
CD46-203ENST00000354848 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
CD46-203ENST00000354848 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
CD46-203ENST00000354848 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
CD46-203ENST00000354848 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
CD46-203ENST00000354848 GRPEL1Q9HAV7 217 aa10.07□□□□□ -0.8
CD46-203ENST00000354848 ABCC5O15440 1437 aa10.07□□□□□ -0.8
CD46-203ENST00000354848 ABCA10Q8WWZ4 1543 aa10.06□□□□□ -0.8
CD46-203ENST00000354848 RAD54L2Q9Y4B4 1467 aa10.06□□□□□ -0.8
CD46-203ENST00000354848 TRAK2O60296 914 aa10.06□□□□□ -0.8
CD46-203ENST00000354848 EIF3AQ14152 1382 aaKnown RBP10.06□□□□□ -0.8
CD46-203ENST00000354848 IGHDP01880 384 aa10.06□□□□□ -0.8
CD46-203ENST00000354848 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
CD46-203ENST00000354848 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
CD46-203ENST00000354848 NESP48681 1621 aa10.05□□□□□ -0.8
CD46-203ENST00000354848 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
CD46-203ENST00000354848 CC2D1BQ5T0F9 858 aaKnown RBP10.05□□□□□ -0.8
CD46-203ENST00000354848 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
CD46-203ENST00000354848 TRIM44Q96DX7 344 aaPredicted RBP10.04□□□□□ -0.8
CD46-203ENST00000354848 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
CD46-203ENST00000354848 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
CD46-203ENST00000354848 KIAA1211Q6ZU35 1233 aa10.03□□□□□ -0.8
CD46-203ENST00000354848 TBC1D32Q96NH3 1257 aa10.03□□□□□ -0.8
CD46-203ENST00000354848 EPRSP07814 1512 aaKnown RBP10.03□□□□□ -0.8
CD46-203ENST00000354848 PKD2Q13563 968 aa10.03□□□□□ -0.8
CD46-203ENST00000354848 ARHGEF12Q9NZN5 1544 aa10.03□□□□□ -0.8
CD46-203ENST00000354848 ISY1Q9ULR0 285 aaKnown RBP10.03□□□□□ -0.8
CD46-203ENST00000354848 ZNF521Q96K83 1311 aa10.02□□□□□ -0.8
CD46-203ENST00000354848 A0A0U1RQG5 324 aaPredicted RBP10.02□□□□□ -0.81
CD46-203ENST00000354848 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
CD46-203ENST00000354848 UPF2Q9HAU5 1272 aaKnown RBP10.02□□□□□ -0.81
CD46-203ENST00000354848 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.81
CD46-203ENST00000354848 CADPSQ9ULU8 1353 aa10.02□□□□□ -0.81
CD46-203ENST00000354848 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.81
CD46-203ENST00000354848 ZNF644Q9H582 1327 aaPredicted RBP10.01□□□□□ -0.81
CD46-203ENST00000354848 CHMP5Q9NZZ3 219 aa10.01□□□□□ -0.81
CD46-203ENST00000354848 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
CD46-203ENST00000354848 AAMPQ13685 434 aa10.01□□□□□ -0.81
CD46-203ENST00000354848 POLA1P09884 1462 aaPredicted RBP10□□□□□ -0.81
CD46-203ENST00000354848 SLFN5Q08AF3 891 aa10□□□□□ -0.81
CD46-203ENST00000354848 BCAR3O75815 825 aa9.99□□□□□ -0.81
CD46-203ENST00000354848 ADGBQ8N7X0 1667 aa9.99□□□□□ -0.81
CD46-203ENST00000354848 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
CD46-203ENST00000354848 GAS2L3Q86XJ1 694 aa9.99□□□□□ -0.81
CD46-203ENST00000354848 RIPK4P57078 832 aa9.98□□□□□ -0.81
CD46-203ENST00000354848 DNMBPQ6XZF7 1577 aa9.98□□□□□ -0.81
CD46-203ENST00000354848 CLASP1Q7Z460 1538 aa9.98□□□□□ -0.81
CD46-203ENST00000354848 TRMT2AQ8IZ69 625 aaKnown RBP9.98□□□□□ -0.81
CD46-203ENST00000354848 NKTRP30414 1462 aaKnown RBP9.98□□□□□ -0.81
CD46-203ENST00000354848 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
CD46-203ENST00000354848 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
CD46-203ENST00000354848 PANK3Q9H999 370 aa9.97□□□□□ -0.81
CD46-203ENST00000354848 OFD1O75665 1012 aa9.97□□□□□ -0.81
CD46-203ENST00000354848 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
CD46-203ENST00000354848 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
CD46-203ENST00000354848 TRPM1Q7Z4N2 1603 aa9.96□□□□□ -0.81
CD46-203ENST00000354848 CEP170Q5SW79 1584 aa9.96□□□□□ -0.81
CD46-203ENST00000354848 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.81
CD46-203ENST00000354848 SPINK5Q9NQ38 1064 aaPredicted RBP9.96□□□□□ -0.81
CD46-203ENST00000354848 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 TERF1P54274 439 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 MAP7D2Q96T17 732 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
CD46-203ENST00000354848 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 RTEL1-TNFRSF6BF6WH68 1400 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 FGD1P98174 961 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
CD46-203ENST00000354848 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms