RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 NUDCQ9Y266 331 aa13.02□□□□□ -0.32
RPE-201ENST00000354506 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
RPE-201ENST00000354506 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.32
RPE-201ENST00000354506 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.33
RPE-201ENST00000354506 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
RPE-201ENST00000354506 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.33
RPE-201ENST00000354506 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.33
RPE-201ENST00000354506 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
RPE-201ENST00000354506 UNC13BO14795 1591 aa13□□□□□ -0.33
RPE-201ENST00000354506 SKAP1Q86WV1 359 aa13□□□□□ -0.33
RPE-201ENST00000354506 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
RPE-201ENST00000354506 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
RPE-201ENST00000354506 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
RPE-201ENST00000354506 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
RPE-201ENST00000354506 LAMC1P11047 1609 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 ST20-MTHFSA0A0A6YYL1 179 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
RPE-201ENST00000354506 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
RPE-201ENST00000354506 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
RPE-201ENST00000354506 FBLN2P98095 1184 aa12.97□□□□□ -0.33
RPE-201ENST00000354506 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
RPE-201ENST00000354506 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
RPE-201ENST00000354506 RALBP1Q15311 655 aa12.96□□□□□ -0.33
RPE-201ENST00000354506 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.34
RPE-201ENST00000354506 DCAF11Q8TEB1 546 aa12.95□□□□□ -0.34
RPE-201ENST00000354506 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
RPE-201ENST00000354506 PLXNC1O60486 1568 aa12.95□□□□□ -0.34
RPE-201ENST00000354506 IQGAP3Q86VI3 1631 aa12.95□□□□□ -0.34
RPE-201ENST00000354506 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
RPE-201ENST00000354506 PER1O15534 1290 aaPredicted RBP12.95□□□□□ -0.34
RPE-201ENST00000354506 ATP10AO60312 1499 aa12.94□□□□□ -0.34
RPE-201ENST00000354506 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
RPE-201ENST00000354506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPE-201ENST00000354506 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
RPE-201ENST00000354506 MAGI2Q86UL8 1455 aa12.93□□□□□ -0.34
RPE-201ENST00000354506 NOP58Q9Y2X3 529 aaKnown RBP12.93□□□□□ -0.34
RPE-201ENST00000354506 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
RPE-201ENST00000354506 A2MP01023 1474 aa12.93□□□□□ -0.34
RPE-201ENST00000354506 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
RPE-201ENST00000354506 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
RPE-201ENST00000354506 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
RPE-201ENST00000354506 INSRP06213 1382 aa12.92□□□□□ -0.34
RPE-201ENST00000354506 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
RPE-201ENST00000354506 CCDC144AA2RUR9 1427 aa12.91□□□□□ -0.34
RPE-201ENST00000354506 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
RPE-201ENST00000354506 TESK2Q96S53 571 aa12.9□□□□□ -0.34
RPE-201ENST00000354506 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
RPE-201ENST00000354506 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
RPE-201ENST00000354506 PLIN1O60240 522 aa12.88□□□□□ -0.35
RPE-201ENST00000354506 RNF17Q9BXT8 1623 aaKnown RBP12.88□□□□□ -0.35
RPE-201ENST00000354506 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
RPE-201ENST00000354506 CHD1O14646 1710 aa12.87□□□□□ -0.35
RPE-201ENST00000354506 DUOX2Q9NRD8 1548 aa12.87□□□□□ -0.35
RPE-201ENST00000354506 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
RPE-201ENST00000354506 ARHGAP5Q13017 1502 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 RGL3Q3MIN7 710 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
RPE-201ENST00000354506 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
RPE-201ENST00000354506 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
RPE-201ENST00000354506 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
RPE-201ENST00000354506 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
RPE-201ENST00000354506 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
RPE-201ENST00000354506 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
RPE-201ENST00000354506 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
RPE-201ENST00000354506 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
RPE-201ENST00000354506 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
RPE-201ENST00000354506 PLCH2O75038 1416 aa12.82□□□□□ -0.36
RPE-201ENST00000354506 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
RPE-201ENST00000354506 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
RPE-201ENST00000354506 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
RPE-201ENST00000354506 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
RPE-201ENST00000354506 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
RPE-201ENST00000354506 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
RPE-201ENST00000354506 ABCC1P33527 1531 aa12.8□□□□□ -0.36
RPE-201ENST00000354506 WDR7Q9Y4E6 1490 aa12.8□□□□□ -0.36
RPE-201ENST00000354506 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
RPE-201ENST00000354506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
RPE-201ENST00000354506 PANK3Q9H999 370 aa12.78□□□□□ -0.36
RPE-201ENST00000354506 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
RPE-201ENST00000354506 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
RPE-201ENST00000354506 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.36
RPE-201ENST00000354506 DEPDC5O75140 1603 aa12.77□□□□□ -0.36
RPE-201ENST00000354506 PTPRTO14522 1441 aa12.77□□□□□ -0.36
RPE-201ENST00000354506 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
RPE-201ENST00000354506 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
RPE-201ENST00000354506 CEP152O94986 1710 aa12.77□□□□□ -0.37
RPE-201ENST00000354506 TRPM2O94759 1503 aa12.76□□□□□ -0.37
RPE-201ENST00000354506 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
RPE-201ENST00000354506 SCAPERQ9BY12 1400 aa12.76□□□□□ -0.37
RPE-201ENST00000354506 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
RPE-201ENST00000354506 TMF1P82094 1093 aa12.75□□□□□ -0.37
RPE-201ENST00000354506 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
RPE-201ENST00000354506 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
RPE-201ENST00000354506 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms