RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 APPP05067 770 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 H3BQV1 296 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
LMBR1-201ENST00000353442 IBSPP21815 317 aaPredicted RBP16.75■□□□□ 0.27
LMBR1-201ENST00000353442 RILPL2Q969X0 211 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
LMBR1-201ENST00000353442 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
LMBR1-201ENST00000353442 TMEM132AQ24JP5 1023 aa16.73■□□□□ 0.27
LMBR1-201ENST00000353442 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
LMBR1-201ENST00000353442 KDM4AO75164 1064 aa16.72■□□□□ 0.27
LMBR1-201ENST00000353442 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
LMBR1-201ENST00000353442 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
LMBR1-201ENST00000353442 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
LMBR1-201ENST00000353442 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
LMBR1-201ENST00000353442 TPM2P07951 284 aa16.71■□□□□ 0.27
LMBR1-201ENST00000353442 FOSBP53539 338 aa16.71■□□□□ 0.27
LMBR1-201ENST00000353442 RBM33Q96EV2 1170 aaKnown RBP16.71■□□□□ 0.26
LMBR1-201ENST00000353442 GBP4Q96PP9 640 aa16.71■□□□□ 0.26
LMBR1-201ENST00000353442 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
LMBR1-201ENST00000353442 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
LMBR1-201ENST00000353442 FAM184AQ8NB25 1140 aa16.7■□□□□ 0.26
LMBR1-201ENST00000353442 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
LMBR1-201ENST00000353442 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
LMBR1-201ENST00000353442 ZFYVE27Q5T4F4 411 aa16.68■□□□□ 0.26
LMBR1-201ENST00000353442 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
LMBR1-201ENST00000353442 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
LMBR1-201ENST00000353442 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
LMBR1-201ENST00000353442 R3HCC1Q9Y3T6 440 aaKnown RBP16.68■□□□□ 0.26
LMBR1-201ENST00000353442 HMMRO75330 724 aa16.66■□□□□ 0.26
LMBR1-201ENST00000353442 KIF3BO15066 747 aa16.66■□□□□ 0.26
LMBR1-201ENST00000353442 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
LMBR1-201ENST00000353442 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
LMBR1-201ENST00000353442 PPM1FP49593 454 aaPredicted RBP16.65■□□□□ 0.26
LMBR1-201ENST00000353442 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
LMBR1-201ENST00000353442 ODF2Q5BJF6 829 aa16.64■□□□□ 0.25
LMBR1-201ENST00000353442 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
LMBR1-201ENST00000353442 CT47A1Q5JQC4 288 aaPredicted RBP16.64■□□□□ 0.25
LMBR1-201ENST00000353442 PLIN1O60240 522 aa16.63■□□□□ 0.25
LMBR1-201ENST00000353442 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
LMBR1-201ENST00000353442 PKD2Q13563 968 aa16.63■□□□□ 0.25
LMBR1-201ENST00000353442 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
LMBR1-201ENST00000353442 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
LMBR1-201ENST00000353442 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
LMBR1-201ENST00000353442 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
LMBR1-201ENST00000353442 NAP1L1P55209 391 aaKnown RBP16.61■□□□□ 0.25
LMBR1-201ENST00000353442 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
LMBR1-201ENST00000353442 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
LMBR1-201ENST00000353442 WDR70Q9NW82 654 aa16.61■□□□□ 0.25
LMBR1-201ENST00000353442 HDAC5Q9UQL6 1122 aa16.61■□□□□ 0.25
LMBR1-201ENST00000353442 TRIM29Q14134 588 aa16.6■□□□□ 0.25
LMBR1-201ENST00000353442 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
LMBR1-201ENST00000353442 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
LMBR1-201ENST00000353442 TEFQ10587 303 aa16.59■□□□□ 0.25
LMBR1-201ENST00000353442 PSME1Q06323 249 aa16.58■□□□□ 0.25
LMBR1-201ENST00000353442 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
LMBR1-201ENST00000353442 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-201ENST00000353442 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-201ENST00000353442 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
LMBR1-201ENST00000353442 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
LMBR1-201ENST00000353442 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
LMBR1-201ENST00000353442 TPM1P09493 284 aa16.57■□□□□ 0.24
LMBR1-201ENST00000353442 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
LMBR1-201ENST00000353442 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
LMBR1-201ENST00000353442 SKIDA1Q1XH10 827 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
LMBR1-201ENST00000353442 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
LMBR1-201ENST00000353442 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
LMBR1-201ENST00000353442 CCDC47Q96A33 483 aaKnown RBP16.55■□□□□ 0.24
LMBR1-201ENST00000353442 HSPA5P11021 654 aaKnown RBP16.54■□□□□ 0.24
LMBR1-201ENST00000353442 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
LMBR1-201ENST00000353442 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMBR1-201ENST00000353442 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
LMBR1-201ENST00000353442 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
LMBR1-201ENST00000353442 BECN2A8MW95 431 aa16.53■□□□□ 0.24
LMBR1-201ENST00000353442 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
LMBR1-201ENST00000353442 ERICH2A1L162 156 aa16.53■□□□□ 0.24
LMBR1-201ENST00000353442 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
LMBR1-201ENST00000353442 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
LMBR1-201ENST00000353442 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
LMBR1-201ENST00000353442 PMFBP1Q8TBY8 1022 aa16.52■□□□□ 0.24
LMBR1-201ENST00000353442 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■■■■■ 29.3
LMBR1-201ENST00000353442 CCDC70Q6NSX1 233 aa16.52■□□□□ 0.24
LMBR1-201ENST00000353442 CCDC97Q96F63 343 aaPredicted RBP16.52■□□□□ 0.23
LMBR1-201ENST00000353442 CPLX1O14810 134 aa16.52■□□□□ 0.23
LMBR1-201ENST00000353442 ATP2B2Q01814 1243 aa16.52■□□□□ 0.23
LMBR1-201ENST00000353442 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
LMBR1-201ENST00000353442 ANKRD45Q5TZF3 282 aa16.51■□□□□ 0.23
LMBR1-201ENST00000353442 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
LMBR1-201ENST00000353442 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
LMBR1-201ENST00000353442 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
LMBR1-201ENST00000353442 ST18O60284 1047 aa16.5■□□□□ 0.23
LMBR1-201ENST00000353442 PTMSP20962 102 aa16.5■□□□□ 0.23
LMBR1-201ENST00000353442 EPS15P42566 896 aa16.5■□□□□ 0.23
LMBR1-201ENST00000353442 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms