RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
SMC6-201ENST00000351948 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
SMC6-201ENST00000351948 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
SMC6-201ENST00000351948 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
SMC6-201ENST00000351948 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
SMC6-201ENST00000351948 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
SMC6-201ENST00000351948 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
SMC6-201ENST00000351948 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
SMC6-201ENST00000351948 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
SMC6-201ENST00000351948 TAOK2Q9UL54 1235 aa17.61■□□□□ 0.41
SMC6-201ENST00000351948 EPRSP07814 1512 aaKnown RBP17.61■□□□□ 0.41
SMC6-201ENST00000351948 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
SMC6-201ENST00000351948 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
SMC6-201ENST00000351948 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
SMC6-201ENST00000351948 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
SMC6-201ENST00000351948 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
SMC6-201ENST00000351948 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
SMC6-201ENST00000351948 COG3Q96JB2 828 aa17.59■□□□□ 0.41
SMC6-201ENST00000351948 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
SMC6-201ENST00000351948 EHBP1L1Q8N3D4 1523 aa17.58■□□□□ 0.41
SMC6-201ENST00000351948 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.41
SMC6-201ENST00000351948 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.41
SMC6-201ENST00000351948 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
SMC6-201ENST00000351948 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
SMC6-201ENST00000351948 MS4A1P11836 297 aa17.57■□□□□ 0.4
SMC6-201ENST00000351948 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
SMC6-201ENST00000351948 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
SMC6-201ENST00000351948 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
SMC6-201ENST00000351948 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
SMC6-201ENST00000351948 TXNDC2Q86VQ3 553 aa17.55■□□□□ 0.4
SMC6-201ENST00000351948 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
SMC6-201ENST00000351948 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SMC6-201ENST00000351948 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
SMC6-201ENST00000351948 PSME1Q06323 249 aa17.53■□□□□ 0.4
SMC6-201ENST00000351948 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
SMC6-201ENST00000351948 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMC6-201ENST00000351948 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
SMC6-201ENST00000351948 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
SMC6-201ENST00000351948 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
SMC6-201ENST00000351948 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
SMC6-201ENST00000351948 DAPK1P53355 1430 aa17.52■□□□□ 0.39
SMC6-201ENST00000351948 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
SMC6-201ENST00000351948 APAF1O14727 1248 aa17.5■□□□□ 0.39
SMC6-201ENST00000351948 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
SMC6-201ENST00000351948 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
SMC6-201ENST00000351948 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
SMC6-201ENST00000351948 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
SMC6-201ENST00000351948 BECN1Q14457 450 aa17.49■□□□□ 0.39
SMC6-201ENST00000351948 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
SMC6-201ENST00000351948 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
SMC6-201ENST00000351948 CCDC7Q96M83 1385 aa17.47■□□□□ 0.39
SMC6-201ENST00000351948 PLIN1O60240 522 aa17.47■□□□□ 0.39
SMC6-201ENST00000351948 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
SMC6-201ENST00000351948 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
SMC6-201ENST00000351948 CD109Q6YHK3 1445 aa17.47■□□□□ 0.39
SMC6-201ENST00000351948 CUL7Q14999 1698 aa17.46■□□□□ 0.39
SMC6-201ENST00000351948 HFM1A2PYH4 1435 aa17.46■□□□□ 0.39
SMC6-201ENST00000351948 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
SMC6-201ENST00000351948 KCNJ4P48050 445 aa17.46■□□□□ 0.39
SMC6-201ENST00000351948 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
SMC6-201ENST00000351948 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
SMC6-201ENST00000351948 EVA1CP58658 441 aa17.45■□□□□ 0.38
SMC6-201ENST00000351948 HMOX1P09601 288 aa17.45■□□□□ 0.38
SMC6-201ENST00000351948 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
SMC6-201ENST00000351948 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
SMC6-201ENST00000351948 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
SMC6-201ENST00000351948 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
SMC6-201ENST00000351948 ATF3P18847 181 aa17.43■□□□□ 0.38
SMC6-201ENST00000351948 DIAPH1O60610 1272 aaKnown RBP17.42■□□□□ 0.38
SMC6-201ENST00000351948 DDRGK1Q96HY6 314 aa17.42■□□□□ 0.38
SMC6-201ENST00000351948 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
SMC6-201ENST00000351948 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
SMC6-201ENST00000351948 SLC12A5Q9H2X9 1139 aa17.42■□□□□ 0.38
SMC6-201ENST00000351948 NAIPQ13075 1403 aa17.41■□□□□ 0.38
SMC6-201ENST00000351948 NLRP6P59044 892 aa17.41■□□□□ 0.38
SMC6-201ENST00000351948 FGD1P98174 961 aa17.4■□□□□ 0.38
SMC6-201ENST00000351948 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
SMC6-201ENST00000351948 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
SMC6-201ENST00000351948 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
SMC6-201ENST00000351948 BIVM-ERCC5R4GMW8 1640 aa17.4■□□□□ 0.38
SMC6-201ENST00000351948 LMOD3Q0VAK6 560 aa17.39■□□□□ 0.38
SMC6-201ENST00000351948 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.38
SMC6-201ENST00000351948 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.38
SMC6-201ENST00000351948 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
SMC6-201ENST00000351948 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
SMC6-201ENST00000351948 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
SMC6-201ENST00000351948 C1orf141Q5JVX7 400 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 THEMISQ8N1K5 641 aaPredicted RBP17.37■□□□□ 0.37
SMC6-201ENST00000351948 TEFQ10587 303 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
SMC6-201ENST00000351948 RIPK4P57078 832 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
SMC6-201ENST00000351948 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 ABCC5O15440 1437 aa17.37■□□□□ 0.37
SMC6-201ENST00000351948 MTHFSP49914 203 aa17.36■□□□□ 0.37
SMC6-201ENST00000351948 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
SMC6-201ENST00000351948 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
SMC6-201ENST00000351948 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
SMC6-201ENST00000351948 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms