RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KDM6BO15054 1643 aa16.95■□□□□ 0.3
IFT88-202ENST00000351808 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
IFT88-202ENST00000351808 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
IFT88-202ENST00000351808 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
IFT88-202ENST00000351808 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
IFT88-202ENST00000351808 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
IFT88-202ENST00000351808 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
IFT88-202ENST00000351808 OFD1O75665 1012 aa16.89■□□□□ 0.29
IFT88-202ENST00000351808 GAS2L3Q86XJ1 694 aa16.89■□□□□ 0.29
IFT88-202ENST00000351808 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
IFT88-202ENST00000351808 IGHDP01880 384 aa16.88■□□□□ 0.29
IFT88-202ENST00000351808 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
IFT88-202ENST00000351808 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
IFT88-202ENST00000351808 ISY1Q9ULR0 285 aaKnown RBP16.86■□□□□ 0.29
IFT88-202ENST00000351808 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
IFT88-202ENST00000351808 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
IFT88-202ENST00000351808 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.85■□□□□ 0.29
IFT88-202ENST00000351808 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
IFT88-202ENST00000351808 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
IFT88-202ENST00000351808 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.84■□□□□ 0.29
IFT88-202ENST00000351808 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
IFT88-202ENST00000351808 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
IFT88-202ENST00000351808 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
IFT88-202ENST00000351808 ZSCAN30Q86W11 494 aa16.84■□□□□ 0.29
IFT88-202ENST00000351808 CFTRP13569 1480 aa16.84■□□□□ 0.29
IFT88-202ENST00000351808 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
IFT88-202ENST00000351808 PDIA4P13667 645 aaKnown RBP16.83■□□□□ 0.28
IFT88-202ENST00000351808 TERF1P54274 439 aa16.82■□□□□ 0.28
IFT88-202ENST00000351808 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
IFT88-202ENST00000351808 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
IFT88-202ENST00000351808 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
IFT88-202ENST00000351808 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
IFT88-202ENST00000351808 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
IFT88-202ENST00000351808 PARD3Q8TEW0 1356 aa16.8■□□□□ 0.28
IFT88-202ENST00000351808 KDM5CP41229 1560 aa16.8■□□□□ 0.28
IFT88-202ENST00000351808 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
IFT88-202ENST00000351808 UQCRHLA0A096LP55 91 aa16.79■□□□□ 0.28
IFT88-202ENST00000351808 UQCRHP07919 91 aa16.79■□□□□ 0.28
IFT88-202ENST00000351808 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
IFT88-202ENST00000351808 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
IFT88-202ENST00000351808 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
IFT88-202ENST00000351808 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
IFT88-202ENST00000351808 DMTNQ08495 405 aa16.77■□□□□ 0.28
IFT88-202ENST00000351808 STAC3Q96MF2 364 aa16.77■□□□□ 0.27
IFT88-202ENST00000351808 ZMYM4Q5VZL5 1548 aa16.77■□□□□ 0.27
IFT88-202ENST00000351808 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
IFT88-202ENST00000351808 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
IFT88-202ENST00000351808 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
IFT88-202ENST00000351808 UTP14CQ5TAP6 766 aaKnown RBP16.75■□□□□ 0.27
IFT88-202ENST00000351808 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
IFT88-202ENST00000351808 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
IFT88-202ENST00000351808 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
IFT88-202ENST00000351808 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
IFT88-202ENST00000351808 BCAR3O75815 825 aa16.74■□□□□ 0.27
IFT88-202ENST00000351808 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
IFT88-202ENST00000351808 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
IFT88-202ENST00000351808 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
IFT88-202ENST00000351808 ZSCAN20P17040 1043 aaPredicted RBP16.74■□□□□ 0.27
IFT88-202ENST00000351808 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
IFT88-202ENST00000351808 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
IFT88-202ENST00000351808 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
IFT88-202ENST00000351808 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
IFT88-202ENST00000351808 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
IFT88-202ENST00000351808 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
IFT88-202ENST00000351808 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
IFT88-202ENST00000351808 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
IFT88-202ENST00000351808 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
IFT88-202ENST00000351808 DYNC1I1O14576 645 aa16.7■□□□□ 0.26
IFT88-202ENST00000351808 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
IFT88-202ENST00000351808 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
IFT88-202ENST00000351808 INSRP06213 1382 aa16.7■□□□□ 0.26
IFT88-202ENST00000351808 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
IFT88-202ENST00000351808 UGGT2Q9NYU1 1516 aa16.69■□□□□ 0.26
IFT88-202ENST00000351808 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
IFT88-202ENST00000351808 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
IFT88-202ENST00000351808 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
IFT88-202ENST00000351808 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
IFT88-202ENST00000351808 KIF14Q15058 1648 aa16.68■□□□□ 0.26
IFT88-202ENST00000351808 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
IFT88-202ENST00000351808 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
IFT88-202ENST00000351808 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
IFT88-202ENST00000351808 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
IFT88-202ENST00000351808 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
IFT88-202ENST00000351808 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
IFT88-202ENST00000351808 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
IFT88-202ENST00000351808 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
IFT88-202ENST00000351808 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
IFT88-202ENST00000351808 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
IFT88-202ENST00000351808 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
IFT88-202ENST00000351808 E9PCH4 1651 aa16.66■□□□□ 0.26
IFT88-202ENST00000351808 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
IFT88-202ENST00000351808 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.65■□□□□ 0.26
IFT88-202ENST00000351808 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
IFT88-202ENST00000351808 GBP4Q96PP9 640 aa16.65■□□□□ 0.26
IFT88-202ENST00000351808 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
IFT88-202ENST00000351808 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
IFT88-202ENST00000351808 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
IFT88-202ENST00000351808 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
IFT88-202ENST00000351808 TMEM51Q9NW97 253 aa16.63■□□□□ 0.25
IFT88-202ENST00000351808 DDIT3P35638 169 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms