RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
TNFSF13-202ENST00000349228 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
TNFSF13-202ENST00000349228 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
TNFSF13-202ENST00000349228 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
TNFSF13-202ENST00000349228 TTC37Q6PGP7 1564 aa21.09■□□□□ 0.97
TNFSF13-202ENST00000349228 UHRF1BP1LA0JNW5 1464 aa21.08■□□□□ 0.96
TNFSF13-202ENST00000349228 MYO5CQ9NQX4 1742 aa21.07■□□□□ 0.96
TNFSF13-202ENST00000349228 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
TNFSF13-202ENST00000349228 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
TNFSF13-202ENST00000349228 PLCH2O75038 1416 aa21.05■□□□□ 0.96
TNFSF13-202ENST00000349228 ERBINQ96RT1 1412 aa21.05■□□□□ 0.96
TNFSF13-202ENST00000349228 ATP10AO60312 1499 aa21.05■□□□□ 0.96
TNFSF13-202ENST00000349228 PPP4R2Q9NY27 417 aa21.04■□□□□ 0.96
TNFSF13-202ENST00000349228 PRAG1Q86YV5 1406 aa21.04■□□□□ 0.96
TNFSF13-202ENST00000349228 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
TNFSF13-202ENST00000349228 IQGAP3Q86VI3 1631 aa21.04■□□□□ 0.96
TNFSF13-202ENST00000349228 ST20-MTHFSA0A0A6YYL1 179 aa21.03■□□□□ 0.96
TNFSF13-202ENST00000349228 GPRASP1Q5JY77 1395 aa21.02■□□□□ 0.96
TNFSF13-202ENST00000349228 RALBP1Q15311 655 aa21.02■□□□□ 0.96
TNFSF13-202ENST00000349228 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
TNFSF13-202ENST00000349228 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
TNFSF13-202ENST00000349228 SMG6Q86US8 1419 aaKnown RBP21.01■□□□□ 0.95
TNFSF13-202ENST00000349228 PLA2R1Q13018 1463 aa21■□□□□ 0.95
TNFSF13-202ENST00000349228 LAMC1P11047 1609 aa21■□□□□ 0.95
TNFSF13-202ENST00000349228 TRPM1Q7Z4N2 1603 aa20.99■□□□□ 0.95
TNFSF13-202ENST00000349228 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
TNFSF13-202ENST00000349228 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
TNFSF13-202ENST00000349228 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
TNFSF13-202ENST00000349228 TMC1Q8TDI8 760 aa20.97■□□□□ 0.95
TNFSF13-202ENST00000349228 PNISRQ8TF01 805 aaKnown RBP20.97■□□□□ 0.95
TNFSF13-202ENST00000349228 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
TNFSF13-202ENST00000349228 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
TNFSF13-202ENST00000349228 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
TNFSF13-202ENST00000349228 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
TNFSF13-202ENST00000349228 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
TNFSF13-202ENST00000349228 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.94
TNFSF13-202ENST00000349228 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
TNFSF13-202ENST00000349228 A2MP01023 1474 aa20.94■□□□□ 0.94
TNFSF13-202ENST00000349228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
TNFSF13-202ENST00000349228 ABCC1P33527 1531 aa20.93■□□□□ 0.94
TNFSF13-202ENST00000349228 E9PCH4 1651 aa20.93■□□□□ 0.94
TNFSF13-202ENST00000349228 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
TNFSF13-202ENST00000349228 NUDCQ9Y266 331 aa20.93■□□□□ 0.94
TNFSF13-202ENST00000349228 LRPPRCP42704 1394 aaKnown RBP20.92■□□□□ 0.94
TNFSF13-202ENST00000349228 IRX6P78412 446 aaPredicted RBP20.91■□□□□ 0.94
TNFSF13-202ENST00000349228 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
TNFSF13-202ENST00000349228 RGL3Q3MIN7 710 aa20.89■□□□□ 0.93
TNFSF13-202ENST00000349228 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.93
TNFSF13-202ENST00000349228 COL17A1Q9UMD9 1497 aaPredicted RBP20.86■□□□□ 0.93
TNFSF13-202ENST00000349228 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
TNFSF13-202ENST00000349228 NLRP13Q86W25 1043 aa20.86■□□□□ 0.93
TNFSF13-202ENST00000349228 PARD3Q8TEW0 1356 aa20.85■□□□□ 0.93
TNFSF13-202ENST00000349228 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
TNFSF13-202ENST00000349228 TRAPPC8Q9Y2L5 1435 aa20.85■□□□□ 0.93
TNFSF13-202ENST00000349228 INSRP06213 1382 aa20.85■□□□□ 0.93
TNFSF13-202ENST00000349228 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
TNFSF13-202ENST00000349228 TMF1P82094 1093 aa20.83■□□□□ 0.92
TNFSF13-202ENST00000349228 TESK2Q96S53 571 aa20.83■□□□□ 0.92
TNFSF13-202ENST00000349228 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
TNFSF13-202ENST00000349228 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
TNFSF13-202ENST00000349228 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
TNFSF13-202ENST00000349228 ZMYM4Q5VZL5 1548 aa20.8■□□□□ 0.92
TNFSF13-202ENST00000349228 PTPRTO14522 1441 aa20.79■□□□□ 0.92
TNFSF13-202ENST00000349228 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
TNFSF13-202ENST00000349228 TRPM2O94759 1503 aa20.78■□□□□ 0.92
TNFSF13-202ENST00000349228 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
TNFSF13-202ENST00000349228 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
TNFSF13-202ENST00000349228 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
TNFSF13-202ENST00000349228 KANK1Q14678 1352 aa20.77■□□□□ 0.92
TNFSF13-202ENST00000349228 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
TNFSF13-202ENST00000349228 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
TNFSF13-202ENST00000349228 SCAPERQ9BY12 1400 aa20.75■□□□□ 0.91
TNFSF13-202ENST00000349228 CDCA8Q53HL2 280 aa20.75■□□□□ 0.91
TNFSF13-202ENST00000349228 NEURL4Q96JN8 1562 aa20.74■□□□□ 0.91
TNFSF13-202ENST00000349228 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
TNFSF13-202ENST00000349228 AFAP1Q8N556 730 aa20.73■□□□□ 0.91
TNFSF13-202ENST00000349228 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
TNFSF13-202ENST00000349228 TET3O43151 1660 aa20.71■□□□□ 0.91
TNFSF13-202ENST00000349228 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
TNFSF13-202ENST00000349228 VWDEQ8N2E2 1590 aa20.71■□□□□ 0.91
TNFSF13-202ENST00000349228 FANCAO15360 1455 aa20.71■□□□□ 0.91
TNFSF13-202ENST00000349228 PANK3Q9H999 370 aa20.71■□□□□ 0.91
TNFSF13-202ENST00000349228 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
TNFSF13-202ENST00000349228 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
TNFSF13-202ENST00000349228 INO80Q9ULG1 1556 aaPredicted RBP20.7■□□□□ 0.9
TNFSF13-202ENST00000349228 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
TNFSF13-202ENST00000349228 SCAF11Q99590 1463 aaKnown RBP20.68■□□□□ 0.9
TNFSF13-202ENST00000349228 CEP152O94986 1710 aa20.68■□□□□ 0.9
TNFSF13-202ENST00000349228 SPHKAPQ2M3C7 1700 aa20.68■□□□□ 0.9
TNFSF13-202ENST00000349228 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
TNFSF13-202ENST00000349228 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
TNFSF13-202ENST00000349228 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
TNFSF13-202ENST00000349228 ADGRL1O94910 1474 aa20.64■□□□□ 0.9
TNFSF13-202ENST00000349228 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
TNFSF13-202ENST00000349228 CLTCL1P53675 1640 aa20.64■□□□□ 0.89
TNFSF13-202ENST00000349228 KIAA1210Q9ULL0 1709 aa20.63■□□□□ 0.89
TNFSF13-202ENST00000349228 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
TNFSF13-202ENST00000349228 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
TNFSF13-202ENST00000349228 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
TNFSF13-202ENST00000349228 KIF3BO15066 747 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms